mRNA_M-pyrifera_M_contig127487.5537.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig127487.5537.1 vs. uniprot
Match: A0A4Y2CAC2_ARAVE (Pre-mRNA-splicing factor SYF1 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2CAC2_ARAVE) HSP 1 Score: 170 bits (431), Expect = 4.060e-46 Identity = 79/129 (61.24%), Postives = 99/129 (76.74%), Query Frame = 1
Query: 1 GVPRTREIYEKAVQTLPDKQVKPMCMQYADLECKLGEVDRARAIYVHCSQYCDPQSNPDFWKVWREFEVRHGNEDTFREMLRIRRSVQAQYNTSINFTAANMVAATSVETGAPASAPGEDSMQALERSA 387
GV TREIY++A+ LPD Q K MC+++ADLE KLGE+DRARA+Y HCSQ CDP++NPDFW+ W++FEVRHGNEDT REMLRI+RSVQA YNT +NF +A M++A G +DSMQ+LE A
Sbjct: 632 GVTHTREIYQEAIDVLPDAQAKQMCLKFADLERKLGEIDRARAVYSHCSQMCDPRTNPDFWRTWKDFEVRHGNEDTMREMLRIKRSVQATYNTQVNFMSAQMLSAAVAAAGITVPESDKDSMQSLEAQA 760
BLAST of mRNA_M-pyrifera_M_contig127487.5537.1 vs. uniprot
Match: A0A087TLM1_STEMI (Pre-mRNA-splicing factor SYF1 (Fragment) n=1 Tax=Stegodyphus mimosarum TaxID=407821 RepID=A0A087TLM1_STEMI) HSP 1 Score: 159 bits (402), Expect = 6.150e-46 Identity = 78/129 (60.47%), Postives = 99/129 (76.74%), Query Frame = 1
Query: 1 GVPRTREIYEKAVQTLPDKQVKPMCMQYADLECKLGEVDRARAIYVHCSQYCDPQSNPDFWKVWREFEVRHGNEDTFREMLRIRRSVQAQYNTSINFTAANMVAATSVETGAPASAPGEDSMQALERSA 387
GV TR+IYE+A++ L D + K MC+++ADLE KLGE+DRARAIY HCSQ CDP++N DFW +W+EFEVRHGNEDT REMLRI+RSVQA NT +NF +A M++A +V + G+DSMQ LE A
Sbjct: 32 GVTYTRQIYEQAIEVLSDNEAKQMCLKFADLERKLGEIDRARAIYAHCSQMCDPRTNLDFWNLWKEFEVRHGNEDTMREMLRIKRSVQASVNTQVNFMSAQMLSA-AVAASDGLTDTGKDSMQRLEAQA 159
BLAST of mRNA_M-pyrifera_M_contig127487.5537.1 vs. uniprot
Match: A0A2J7QCS1_9NEOP (Uncharacterized protein n=1 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7QCS1_9NEOP) HSP 1 Score: 156 bits (395), Expect = 1.270e-45 Identity = 77/133 (57.89%), Postives = 102/133 (76.69%), Query Frame = 1
Query: 1 GVPRTREIYEKAVQTLPDKQVKPMCMQYADLECKLGEVDRARAIYVHCSQYCDPQSNPDFWKVWREFEVRHGNEDTFREMLRIRRSVQAQYNTSINFTAANMVAATSVETGAPAS-APG-EDSMQALERSAAQ 393
GVP+TR+IYEKA++ L ++ + MC+++A +E KLGE+DRARAIY +CSQ CDP+ +FW+ W+EFEVRHGNEDT REMLRI+RSVQA YNT +N +A M++A S +G A APG +D M+ LE AAQ
Sbjct: 37 GVPKTRQIYEKAIEVLTEENAREMCLRFAKMETKLGEIDRARAIYAYCSQMCDPRVTAEFWQTWKEFEVRHGNEDTMREMLRIKRSVQATYNTQVNMMSAQMLSAVSNVSGTVAEFAPGAKDGMRMLEAKAAQ 169
BLAST of mRNA_M-pyrifera_M_contig127487.5537.1 vs. uniprot
Match: A0A1B6KU79_9HEMI (Uncharacterized protein (Fragment) n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6KU79_9HEMI) HSP 1 Score: 158 bits (399), Expect = 3.320e-45 Identity = 84/151 (55.63%), Postives = 108/151 (71.52%), Query Frame = 1
Query: 1 GVPRTREIYEKAVQTLPDKQVKPMCMQYADLECKLGEVDRARAIYVHCSQYCDPQSNPDFWKVWREFEVRHGNEDTFREMLRIRRSVQAQYNTSINFTAANMVAATSVETGAPAS-APG-EDSMQALERSAAQAGAGAAFQAAPQPQPAGG 447
GVP+TR+IYEKA+ L + + MC ++A++E KLGE+DRARAIY HCSQ CDP+ +FW+ W+EFEVRHGNEDT REMLRI+RSVQA YNT +N +A M++A S +G A APG +D M+ LE AA+ AF+ PQ AGG
Sbjct: 39 GVPQTRQIYEKAIDVLQEDNCREMCQRFAEMETKLGEIDRARAIYAHCSQICDPRVTAEFWQTWKEFEVRHGNEDTMREMLRIKRSVQATYNTQVNMMSAQMLSAASNVSGTVADLAPGAKDGMRMLEAKAAEM----AFEDRSAPQVAGG 185
BLAST of mRNA_M-pyrifera_M_contig127487.5537.1 vs. uniprot
Match: A0A2J7QGD4_9NEOP (Uncharacterized protein n=1 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7QGD4_9NEOP) HSP 1 Score: 158 bits (399), Expect = 4.020e-45 Identity = 83/151 (54.97%), Postives = 109/151 (72.19%), Query Frame = 1
Query: 1 GVPRTREIYEKAVQTLPDKQVKPMCMQYADLECKLGEVDRARAIYVHCSQYCDPQSNPDFWKVWREFEVRHGNEDTFREMLRIRRSVQAQYNTSINFTAANMVAATSVETGAPAS-APG-EDSMQALERSAAQAGAGAAFQAAPQPQPAGG 447
GVP+TR+IYEKA++ L ++ + MC+++A++E KLGE+DRARAIY HCSQ CDP+ +FW+ W +FEVRHGNEDT REMLRI+RSVQA YNT +N +A M++A S +G A APG +D M+ LE AAQ A + Q QP GG
Sbjct: 46 GVPKTRQIYEKAIEVLTEENAREMCLRFAEMETKLGEIDRARAIYTHCSQMCDPRVTAEFWQTWMDFEVRHGNEDTMREMLRIKRSVQATYNTQVNMMSAQMLSAASNVSGTVADLAPGAKDGMRMLEAKAAQM---AHLERPAQQQPKGG 193
BLAST of mRNA_M-pyrifera_M_contig127487.5537.1 vs. uniprot
Match: A0A2B4RQF3_STYPI (Pre-mRNA-splicing factor SYF1 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RQF3_STYPI) HSP 1 Score: 168 bits (425), Expect = 4.080e-45 Identity = 83/130 (63.85%), Postives = 101/130 (77.69%), Query Frame = 1
Query: 1 GVPRTREIYEKAVQTLPDKQVKPMCMQYADLECKLGEVDRARAIYVHCSQYCDPQSNPDFWKVWREFEVRHGNEDTFREMLRIRRSVQAQYNTSINFTAANMVAAT-SVETGAPASAPGEDSMQALERSA 387
GV TREIYEKA++ LPD+Q + MC+++ADLE KLGE+DRARAIY+H SQ DP++ P FWKVW +FEVRHGNEDTFREMLRI+RSVQAQ+NT +NF +A M+AA S GA P D MQ LE+ A
Sbjct: 564 GVTHTREIYEKAIEVLPDEQAREMCIRFADLERKLGEIDRARAIYMHSSQMADPRTTPTFWKVWHDFEVRHGNEDTFREMLRIKRSVQAQFNTQVNFMSAQMLAAAASKSAGAGTEEPVSDDMQLLEQQA 693
BLAST of mRNA_M-pyrifera_M_contig127487.5537.1 vs. uniprot
Match: Q4RBC7_TETNG ((spotted green pufferfish) hypothetical protein (Fragment) n=1 Tax=Tetraodon nigroviridis TaxID=99883 RepID=Q4RBC7_TETNG) HSP 1 Score: 152 bits (385), Expect = 9.220e-45 Identity = 67/111 (60.36%), Postives = 89/111 (80.18%), Query Frame = 1
Query: 1 GVPRTREIYEKAVQTLPDKQVKPMCMQYADLECKLGEVDRARAIYVHCSQYCDPQSNPDFWKVWREFEVRHGNEDTFREMLRIRRSVQAQYNTSINFTAANMVAATSVETG 333
GV TREIY+KA++ LPD+ + MC++++D+E KLGE+DRARAIY +CSQ CDP+ FW+ W+EFE+RHGNEDT REMLRI+RSVQA YNT +NF ++ M+ AT+ TG
Sbjct: 18 GVTYTREIYQKAIEVLPDEHARDMCLRFSDMESKLGEIDRARAIYSYCSQICDPRVTATFWQTWKEFEIRHGNEDTIREMLRIKRSVQATYNTQVNFMSSQMLKATTSSTG 128
BLAST of mRNA_M-pyrifera_M_contig127487.5537.1 vs. uniprot
Match: UPI0018EC49EB (hypothetical protein n=1 Tax=Chromobacterium sp. ASV5 TaxID=2795109 RepID=UPI0018EC49EB) HSP 1 Score: 152 bits (385), Expect = 1.080e-44 Identity = 66/104 (63.46%), Postives = 87/104 (83.65%), Query Frame = 1
Query: 1 GVPRTREIYEKAVQTLPDKQVKPMCMQYADLECKLGEVDRARAIYVHCSQYCDPQSNPDFWKVWREFEVRHGNEDTFREMLRIRRSVQAQYNTSINFTAANMVA 312
G+P TR IYE+A+ LPD++ K MC+++AD+E +LGE+DRARAIY H SQ+CDP++N DFW W +FEV+HGNEDTF+EMLRI+RSVQAQYNT +NF A+ +A
Sbjct: 15 GLPSTRPIYERAITALPDEEAKDMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTNADFWTKWEQFEVQHGNEDTFKEMLRIKRSVQAQYNTDVNFIASQALA 118
BLAST of mRNA_M-pyrifera_M_contig127487.5537.1 vs. uniprot
Match: A0A428U0Z3_9HYPO (Pre-mRNA-splicing factor syf1 n=2 Tax=Hypocreales TaxID=5125 RepID=A0A428U0Z3_9HYPO) HSP 1 Score: 160 bits (404), Expect = 1.500e-44 Identity = 75/127 (59.06%), Postives = 97/127 (76.38%), Query Frame = 1
Query: 1 GVPRTREIYEKAVQTLPDKQVKPMCMQYADLECKLGEVDRARAIYVHCSQYCDPQSNPDFWKVWREFEVRHGNEDTFREMLRIRRSVQAQYNTSINFTAANMVAATSVETGAPASAPGEDSMQALER 381
G+ TR IYE+A+ LPD + K MC+++AD+E +LGE+DRARAIY H SQ+CDP++NPDFW W +FEV+HGNEDTF+EMLRI+RSVQAQYNT +NF A+ +A + GA A D+M ALER
Sbjct: 226 GLTSTRPIYERAIAALPDAEAKDMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTNPDFWTKWEQFEVQHGNEDTFKEMLRIKRSVQAQYNTDVNFIASQALARSQRRPGAAEDAEVVDAMAALER 352
BLAST of mRNA_M-pyrifera_M_contig127487.5537.1 vs. uniprot
Match: A0A336L7F2_CULSO (CSON004338 protein n=1 Tax=Culicoides sonorensis TaxID=179676 RepID=A0A336L7F2_CULSO) HSP 1 Score: 165 bits (418), Expect = 2.610e-44 Identity = 80/131 (61.07%), Postives = 102/131 (77.86%), Query Frame = 1
Query: 1 GVPRTREIYEKAVQTLPDKQVKPMCMQYADLECKLGEVDRARAIYVHCSQYCDPQSNPDFWKVWREFEVRHGNEDTFREMLRIRRSVQAQYNTSINFTAANMVAATSVETGAPASAPGEDSMQALERSAAQ 393
G+P+TREIYEKA++ LP+K + MC+++A++E KLGE+DRARAIY HCSQ CDP+ DFW+ W++FEVRHGNEDT REMLRI+RSVQA YNTSIN AA M+ T+V A + P DSM+ LE AA+
Sbjct: 640 GLPKTREIYEKAIEDLPEKDSREMCVRFAEMETKLGEIDRARAIYAHCSQMCDPRITADFWQTWKDFEVRHGNEDTMREMLRIKRSVQATYNTSINMMAAQMMHQTAVAANAD-NTPTTDSMKLLEAKAAE 769 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127487.5537.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig127487.5537.1 >prot_M-pyrifera_M_contig127487.5537.1 ID=prot_M-pyrifera_M_contig127487.5537.1|Name=mRNA_M-pyrifera_M_contig127487.5537.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=168bp GVPRTREIYEKAVQTLPDKQVKPMCMQYADLECKLGEVDRARAIYVHCSQback to top mRNA from alignment at M-pyrifera_M_contig127487:1..504- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig127487.5537.1 ID=mRNA_M-pyrifera_M_contig127487.5537.1|Name=mRNA_M-pyrifera_M_contig127487.5537.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=504bp|location=Sequence derived from alignment at M-pyrifera_M_contig127487:1..504- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig127487:1..504- >mRNA_M-pyrifera_M_contig127487.5537.1 ID=mRNA_M-pyrifera_M_contig127487.5537.1|Name=mRNA_M-pyrifera_M_contig127487.5537.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1008bp|location=Sequence derived from alignment at M-pyrifera_M_contig127487:1..504- (Macrocystis pyrifera P11B4 male)back to top |