mRNA_M-pyrifera_M_contig127479.5535.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig127479.5535.1 vs. uniprot
Match: A0A3M8G4W9_9BACT (DNA-binding response regulator n=2 Tax=Balneolaceae TaxID=1813606 RepID=A0A3M8G4W9_9BACT) HSP 1 Score: 311 bits (797), Expect = 4.220e-106 Identity = 153/167 (91.62%), Postives = 161/167 (96.41%), Query Frame = 1
Query: 4 EDTAVSGESSAMENDFDMIILDLGLPDGDGYEVCKNIRDKNITTPVLILSGEQETDVKVKCLKVGADDYLTKPFNTEELIARMEAIQRRSESATDQLLSCGELKVDLLKREFSIKNEKVQLTNNEFNLLVYFLKNKNKIITQEELAEKVWDIHFDTQTNYINVYISY 504
+DTA SGE++A+ DFDMIILDLGLPDGDGYEVCKNIRDKN+ TPVLILSGEQETDVKVKCLKVGADDYLTKPFNTEELIARMEAIQRRSES +DQLL+CGELKVDLLKREFSI NEKVQLTNNEFNLLVYFLKNKNKI+TQEELAEKVWDIHFDTQTNYINVYISY
Sbjct: 30 KDTAASGEAAAIGGDFDMIILDLGLPDGDGYEVCKNIRDKNVKTPVLILSGEQETDVKVKCLKVGADDYLTKPFNTEELIARMEAIQRRSESGSDQLLTCGELKVDLLKREFSINNEKVQLTNNEFNLLVYFLKNKNKIVTQEELAEKVWDIHFDTQTNYINVYISY 196
BLAST of mRNA_M-pyrifera_M_contig127479.5535.1 vs. uniprot
Match: A0A521AX45_9BACT (Two-component system, OmpR family, response regulator/two-component system, OmpR family, response regulator CiaR n=1 Tax=Gracilimonas mengyeensis TaxID=1302730 RepID=A0A521AX45_9BACT) HSP 1 Score: 298 bits (762), Expect = 9.050e-101 Identity = 146/168 (86.90%), Postives = 158/168 (94.05%), Query Frame = 1
Query: 1 TEDTAVSGESSAMENDFDMIILDLGLPDGDGYEVCKNIRDKNITTPVLILSGEQETDVKVKCLKVGADDYLTKPFNTEELIARMEAIQRRSESATDQLLSCGELKVDLLKREFSIKNEKVQLTNNEFNLLVYFLKNKNKIITQEELAEKVWDIHFDTQTNYINVYISY 504
T D A GESSA+ENDFDMIILDLGLPDGDGYEVCKNIRDKN++TPVLILSGEQETDVKVK LKVGADDYLTKPFNTEELIAR++AI+RRSE A DQ+LSCGEL+VDLLKR F+I E+VQLTNNEFNLLVYFLKNKN++ITQEELAEKVWDIHFDTQTNYINVYISY
Sbjct: 29 TIDNAKEGESSAVENDFDMIILDLGLPDGDGYEVCKNIRDKNVSTPVLILSGEQETDVKVKMLKVGADDYLTKPFNTEELIARLDAIKRRSEKAGDQMLSCGELRVDLLKRRFTINGEEVQLTNNEFNLLVYFLKNKNRVITQEELAEKVWDIHFDTQTNYINVYISY 196
BLAST of mRNA_M-pyrifera_M_contig127479.5535.1 vs. uniprot
Match: A0A812VQ53_9DINO (Probable transcriptional regulator ycf27 n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812VQ53_9DINO) HSP 1 Score: 297 bits (761), Expect = 1.280e-100 Identity = 143/168 (85.12%), Postives = 159/168 (94.64%), Query Frame = 1
Query: 1 TEDTAVSGESSAMENDFDMIILDLGLPDGDGYEVCKNIRDKNITTPVLILSGEQETDVKVKCLKVGADDYLTKPFNTEELIARMEAIQRRSESATDQLLSCGELKVDLLKREFSIKNEKVQLTNNEFNLLVYFLKNKNKIITQEELAEKVWDIHFDTQTNYINVYISY 504
TEDT +GE +A+E +FDMIILDLGLPDGDGYE+CK+IRDKN+ TPVLILSGEQE DVKVKCL+VGADDYLTKPFNTEELIAR+EAIQRR+E++ DQ+LSCGELKVDLLKREF I +EKVQLTNNEFNLLVYF+KNKNK+ITQEELAEKVWDIHFDTQTNYINVYISY
Sbjct: 29 TEDTVATGEKAAVEGNFDMIILDLGLPDGDGYELCKSIRDKNVITPVLILSGEQEADVKVKCLRVGADDYLTKPFNTEELIARLEAIQRRTEASGDQVLSCGELKVDLLKREFMINSEKVQLTNNEFNLLVYFIKNKNKVITQEELAEKVWDIHFDTQTNYINVYISY 196
BLAST of mRNA_M-pyrifera_M_contig127479.5535.1 vs. uniprot
Match: UPI000366331F (response regulator transcription factor n=1 Tax=Balneola vulgaris TaxID=287535 RepID=UPI000366331F) HSP 1 Score: 296 bits (759), Expect = 2.590e-100 Identity = 142/168 (84.52%), Postives = 160/168 (95.24%), Query Frame = 1
Query: 1 TEDTAVSGESSAMENDFDMIILDLGLPDGDGYEVCKNIRDKNITTPVLILSGEQETDVKVKCLKVGADDYLTKPFNTEELIARMEAIQRRSESATDQLLSCGELKVDLLKREFSIKNEKVQLTNNEFNLLVYFLKNKNKIITQEELAEKVWDIHFDTQTNYINVYISY 504
T +TA G++ A+END++MI+LDLGLPDGDGYEVCK++RD+ ITTPVL+LSGEQETDVKVKCLKVGADDYLTKPFNTEEL+ARMEAI+RR+ES+ DQLL+CGELKVDLLKREF + NEKVQLTNNEFNLLVYFLKNKN+IITQEELAEKVWDIHFDTQTNYINVYISY
Sbjct: 29 TAETAHDGQTMAVENDYEMIVLDLGLPDGDGYEVCKHLRDEGITTPVLVLSGEQETDVKVKCLKVGADDYLTKPFNTEELLARMEAIKRRTESSGDQLLTCGELKVDLLKREFMVNNEKVQLTNNEFNLLVYFLKNKNRIITQEELAEKVWDIHFDTQTNYINVYISY 196
BLAST of mRNA_M-pyrifera_M_contig127479.5535.1 vs. uniprot
Match: A0A6A8Q6T3_9BACT (Response regulator transcription factor n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6A8Q6T3_9BACT) HSP 1 Score: 293 bits (750), Expect = 6.290e-99 Identity = 142/168 (84.52%), Postives = 156/168 (92.86%), Query Frame = 1
Query: 1 TEDTAVSGESSAMENDFDMIILDLGLPDGDGYEVCKNIRDKNITTPVLILSGEQETDVKVKCLKVGADDYLTKPFNTEELIARMEAIQRRSESATDQLLSCGELKVDLLKREFSIKNEKVQLTNNEFNLLVYFLKNKNKIITQEELAEKVWDIHFDTQTNYINVYISY 504
T D A GE A+EN+++MIILDLGLPDGDGYEVCKNIRDKNI TPVLILSGEQETDVKVKCLKVGADDYLTKPFNTEEL+AR+EAI+RR++S ++Q LSCGELKVDLLKREF+I KVQLTNNEFNLLVYF+KNKN+IITQEELAEKVWDIHFDTQTNYINVYISY
Sbjct: 29 TADNASDGEEMAIENEYEMIILDLGLPDGDGYEVCKNIRDKNIITPVLILSGEQETDVKVKCLKVGADDYLTKPFNTEELLARLEAIERRTQSGSEQQLSCGELKVDLLKREFTINGNKVQLTNNEFNLLVYFMKNKNRIITQEELAEKVWDIHFDTQTNYINVYISY 196
BLAST of mRNA_M-pyrifera_M_contig127479.5535.1 vs. uniprot
Match: A0A2D9FSS9_9BACT (DNA-binding response regulator n=3 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D9FSS9_9BACT) HSP 1 Score: 288 bits (737), Expect = 5.800e-97 Identity = 138/168 (82.14%), Postives = 155/168 (92.26%), Query Frame = 1
Query: 1 TEDTAVSGESSAMENDFDMIILDLGLPDGDGYEVCKNIRDKNITTPVLILSGEQETDVKVKCLKVGADDYLTKPFNTEELIARMEAIQRRSESATDQLLSCGELKVDLLKREFSIKNEKVQLTNNEFNLLVYFLKNKNKIITQEELAEKVWDIHFDTQTNYINVYISY 504
T D A GES+A+ +D+DMIILDLGLPDGDGYEVCKNIR KN+TTPVLILSGEQETDVKVKCLKVGADDYLTKPFNTEELIARM+AI+RRSE++ DQ L CGELKVD+LKRE ++ EK QLTNNEFNLLVYF+KN+N++I+QEELAEKVWDIHFDTQTNYINVYISY
Sbjct: 29 TADNATDGESTAINDDYDMIILDLGLPDGDGYEVCKNIRGKNVTTPVLILSGEQETDVKVKCLKVGADDYLTKPFNTEELIARMDAIKRRSEASGDQQLVCGELKVDMLKREVTVNGEKTQLTNNEFNLLVYFMKNRNRVISQEELAEKVWDIHFDTQTNYINVYISY 196
BLAST of mRNA_M-pyrifera_M_contig127479.5535.1 vs. uniprot
Match: A0A2D8CDW1_9BACT (DNA-binding response regulator n=2 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D8CDW1_9BACT) HSP 1 Score: 288 bits (737), Expect = 5.800e-97 Identity = 141/168 (83.93%), Postives = 155/168 (92.26%), Query Frame = 1
Query: 1 TEDTAVSGESSAMENDFDMIILDLGLPDGDGYEVCKNIRDKNITTPVLILSGEQETDVKVKCLKVGADDYLTKPFNTEELIARMEAIQRRSESATDQLLSCGELKVDLLKREFSIKNEKVQLTNNEFNLLVYFLKNKNKIITQEELAEKVWDIHFDTQTNYINVYISY 504
T D A +GES+A+ DFDMIILDLGLPDGDGYEVCKNIR N+TTPVLILSGEQETDVKVKCLKVGADDYLTKPFNTEELIARM+AI+RR+ES +Q L C EL+VDLLKREFSI ++KVQLTNNEFNLLVYFLKN+N++ITQEELAEKVWDIHFDTQTNYINVYISY
Sbjct: 29 TADNATNGESNAIGGDFDMIILDLGLPDGDGYEVCKNIRGANVTTPVLILSGEQETDVKVKCLKVGADDYLTKPFNTEELIARMDAIKRRTESGGEQQLICKELRVDLLKREFSINSDKVQLTNNEFNLLVYFLKNRNRVITQEELAEKVWDIHFDTQTNYINVYISY 196
BLAST of mRNA_M-pyrifera_M_contig127479.5535.1 vs. uniprot
Match: UPI000CD90273 (response regulator transcription factor n=1 Tax=Gracilimonas amylolytica TaxID=1749045 RepID=UPI000CD90273) HSP 1 Score: 285 bits (730), Expect = 6.750e-96 Identity = 140/168 (83.33%), Postives = 152/168 (90.48%), Query Frame = 1
Query: 1 TEDTAVSGESSAMENDFDMIILDLGLPDGDGYEVCKNIRDKNITTPVLILSGEQETDVKVKCLKVGADDYLTKPFNTEELIARMEAIQRRSESATDQLLSCGELKVDLLKREFSIKNEKVQLTNNEFNLLVYFLKNKNKIITQEELAEKVWDIHFDTQTNYINVYISY 504
T D A GES A+ ND+DMIILDLGLPDGDGYEVCKNIRD NI TPVLILSGEQETDVKVK LKVGADDYLTKPFNTEELIARM AI+RR+ES +Q +SCGELKV+LLKREF+I E VQLTNNEFNLLVYF+KN+N++ITQEELAEKVWDIHFDTQTNYINVYISY
Sbjct: 29 TADNATDGESHAINNDYDMIILDLGLPDGDGYEVCKNIRDNNIETPVLILSGEQETDVKVKMLKVGADDYLTKPFNTEELIARMTAIKRRTESGGEQQISCGELKVNLLKREFTINKEPVQLTNNEFNLLVYFMKNRNRVITQEELAEKVWDIHFDTQTNYINVYISY 196
BLAST of mRNA_M-pyrifera_M_contig127479.5535.1 vs. uniprot
Match: A0A1B6Y6W9_9BACT (DNA-binding response regulator n=2 Tax=unclassified Balneola TaxID=2615059 RepID=A0A1B6Y6W9_9BACT) HSP 1 Score: 275 bits (702), Expect = 1.230e-91 Identity = 132/168 (78.57%), Postives = 151/168 (89.88%), Query Frame = 1
Query: 1 TEDTAVSGESSAMENDFDMIILDLGLPDGDGYEVCKNIRDKNITTPVLILSGEQETDVKVKCLKVGADDYLTKPFNTEELIARMEAIQRRSESATDQLLSCGELKVDLLKREFSIKNEKVQLTNNEFNLLVYFLKNKNKIITQEELAEKVWDIHFDTQTNYINVYISY 504
T +TA G++ A +F+MI+LDLGLPDGDGYEVCK IRD+ + TPVLILSGEQETDVKVKCLKVGADDYLTKPFNTEEL+ARMEAIQRR+ES+ DQ L+CGE+ V LLKRE ++ + K+QLTNNEFNLLVYF+KNKN+IITQEELAEKVWDIHFDTQTNYINVYISY
Sbjct: 29 TAETAKDGQALATGENFEMIVLDLGLPDGDGYEVCKQIRDEGVVTPVLILSGEQETDVKVKCLKVGADDYLTKPFNTEELLARMEAIQRRTESSGDQTLTCGEINVHLLKRECTVNDNKLQLTNNEFNLLVYFIKNKNRIITQEELAEKVWDIHFDTQTNYINVYISY 196
BLAST of mRNA_M-pyrifera_M_contig127479.5535.1 vs. uniprot
Match: A0A6M1T2M5_9BACT (Response regulator transcription factor n=1 Tax=Balneolaceae bacterium YR4-1 TaxID=2709311 RepID=A0A6M1T2M5_9BACT) HSP 1 Score: 257 bits (657), Expect = 9.280e-85 Identity = 125/167 (74.85%), Postives = 147/167 (88.02%), Query Frame = 1
Query: 7 DTAVSGESSAMENDFDMIILDLGLPDGDGYEVCKNIRDKNITTPVLILSGEQETDVKVKCLKVGADDYLTKPFNTEELIARMEAIQRRSESAT-DQLLSCGELKVDLLKREFSIKNEKVQLTNNEFNLLVYFLKNKNKIITQEELAEKVWDIHFDTQTNYINVYISY 504
D A G+ A N++D+IILDLGLPDG+GY++CKNIRD++ITTPVLILS EQETDVKVKCLKVGADDYLTKPFN EEL+AR+EAI RRS A+ +Q+L+CGEL+V LL+REF + +V LTNNEFNLLVY LKNKN+II+QEE+AEKVWDIHFDTQTNYINVYISY
Sbjct: 31 DNAAEGQELAFNNEYDIIILDLGLPDGNGYDICKNIRDQDITTPVLILSAEQETDVKVKCLKVGADDYLTKPFNPEELMARVEAITRRSTDASGEQVLNCGELQVKLLEREFYVDGTEVDLTNNEFNLLVYLLKNKNRIISQEEIAEKVWDIHFDTQTNYINVYISY 197 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127479.5535.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig127479.5535.1 >prot_M-pyrifera_M_contig127479.5535.1 ID=prot_M-pyrifera_M_contig127479.5535.1|Name=mRNA_M-pyrifera_M_contig127479.5535.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=168bp TEDTAVSGESSAMENDFDMIILDLGLPDGDGYEVCKNIRDKNITTPVLILback to top mRNA from alignment at M-pyrifera_M_contig127479:1..504- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig127479.5535.1 ID=mRNA_M-pyrifera_M_contig127479.5535.1|Name=mRNA_M-pyrifera_M_contig127479.5535.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=504bp|location=Sequence derived from alignment at M-pyrifera_M_contig127479:1..504- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig127479:1..504- >mRNA_M-pyrifera_M_contig127479.5535.1 ID=mRNA_M-pyrifera_M_contig127479.5535.1|Name=mRNA_M-pyrifera_M_contig127479.5535.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1008bp|location=Sequence derived from alignment at M-pyrifera_M_contig127479:1..504- (Macrocystis pyrifera P11B4 male)back to top |