mRNA_M-pyrifera_M_contig127477.5534.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig127477.5534.1
Unique NamemRNA_M-pyrifera_M_contig127477.5534.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig127477.5534.1 vs. uniprot
Match: L8H9P5_ACACA (DOCK family protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H9P5_ACACA)

HSP 1 Score: 105 bits (262), Expect = 3.140e-23
Identity = 61/153 (39.87%), Postives = 92/153 (60.13%), Query Frame = 1
Query:    1 DTDEDPDAPPLRAVYGGACEAELTARAVSPVTFKRKAAAWSHEVKLRLPAALSPRHHLVFDFAHVNCEKAAKGAAPLETPLGFAAAPLLA-EGRPLADGAQLLPVAAAKLPTYLSAEAQANCRWVDNKKPLFAFRTRLVSSVLAQNGQLHAFF 456
            D+D DP A  L A+YGG+   +L ++  + +    K   + HE+K+RLP+ L P+HHL F F +V      K  +  E+   +A  PLL  EGR L D  + LPV++A + +Y S+  + + +W+DN KPLF  RT+LVS++  Q+  LHAFF
Sbjct:  537 DSDADPQASGLPAIYGGSSRGKLVSQFDTAIRINDKKPTYYHEIKVRLPSQLGPQHHLFFIFYNVGV----KPKSQTESVCAYAYLPLLDDEGRVLTDEPKRLPVSSAVVASYRSSAVEESMQWLDNGKPLFIVRTKLVSTLYTQDQHLHAFF 685          
BLAST of mRNA_M-pyrifera_M_contig127477.5534.1 vs. uniprot
Match: F4Q9T6_CAVFA (DOCK family protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q9T6_CAVFA)

HSP 1 Score: 95.5 bits (236), Expect = 9.860e-20
Identity = 56/138 (40.58%), Postives = 80/138 (57.97%), Query Frame = 1
Query:   31 LRAVYGGACEAELTARAVSPVTFKRKAAAWSHEVKLRLPAALSPRHHLVFDFAHVNCEKAAKGAAPLETPLGFAAAPLLAEGRPLADGAQLLPVAAAKLPTYLSAEA--QANCR-WVDNKKPLFAFRTRLVSSVLAQN 435
            LR++YG + +  LT R  S V +  +   +S E+K+ LPA L+P HH++  F H+ C ++ KG  P E  LG  A  L    + + DG    P+A    P YL  EA  Q N + WVDNKKP+FAFRTR +S++  Q+
Sbjct:  571 LRSIYGQSSQPLLTRRFYSTVGYHNRKPKFSDEIKINLPANLTPAHHILVTFYHLGCRQSKKGDKP-EVCLGHTAIRLFENDQIIVDGKYKKPMATVFPPKYLDMEAKEQTNSKMWVDNKKPVFAFRTRTISTLYPQD 707          
BLAST of mRNA_M-pyrifera_M_contig127477.5534.1 vs. uniprot
Match: A0A8J4V2P4_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4V2P4_9MYCE)

HSP 1 Score: 95.1 bits (235), Expect = 1.340e-19
Identity = 49/142 (34.51%), Postives = 82/142 (57.75%), Query Frame = 1
Query:   31 LRAVYGGACEAELTARAVSPVTFKRKAAAWSHEVKLRLPAALSPRHHLVFDFAHVNCEKAAKGAAPLETPLGFAAAPLLAEGRPLADGAQLLPVAAAKLPTYLSAEAQANCRWVDNKKPLFAFRTRLVSSVLAQNGQLHAFF 456
            ++++YG +       +A + VT+  K+  ++ E+K+RLP  LSP  +++F F H+ C+K  K     + P+G A  PL+  G+ L D    LPV     P Y+  E +   R++DNKKP+F  R++LVSS+ + +  L+ FF
Sbjct:  651 IKSIYGKSRSEAFVTKAYTSVTYHSKSPTFNDEIKIRLPLTLSPNLNILFTFYHITCQKTDK-ENQFDAPVGHAVLPLMQNGKLLGDETFNLPVGYEFPPRYMKRETENLIRYIDNKKPIFQVRSKLVSSIYSTDDNLNQFF 791          
BLAST of mRNA_M-pyrifera_M_contig127477.5534.1 vs. uniprot
Match: Q86I66_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q86I66_DICDI)

HSP 1 Score: 95.1 bits (235), Expect = 1.340e-19
Identity = 49/153 (32.03%), Postives = 92/153 (60.13%), Query Frame = 1
Query:    1 DTDEDPDAPP-LRAVYGGACEAELTARAVSPVTFKRKAAAWSHEVKLRLPAALSPRHHLVFDFAHVNCEKAAKGAAPLETPLGFAAAPLLAEGRPLADGAQLLPVAAAKLPTYLSAEAQANCRWVDNKKPLFAFRTRLVSSVLAQNGQLHAFF 456
            +TDE+P  P  L+A+YG +      ++A + VT+  K   ++ E+K+RLP + SP  H++F F H+ C+K++ G   ++ P+ +   P++  G+ + +    LP+A      Y   + +A  +++DNKKP+F  R++LVSS+ + +  L++FF
Sbjct:  705 ETDENPLCPEGLKAIYGKSKTQSFNSKAYTQVTYHSKTPVFNDEIKIRLPLSPSPSLHILFTFYHIACQKSSGGGDLVDQPVAYGVLPIIQYGKMIGEEVFNLPLAYEFPSRYTRRDQEATIKYIDNKKPIFQVRSKLVSSIHSTDDYLNSFF 857          
BLAST of mRNA_M-pyrifera_M_contig127477.5534.1 vs. uniprot
Match: F0ZPJ5_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZPJ5_DICPU)

HSP 1 Score: 94.4 bits (233), Expect = 2.480e-19
Identity = 54/147 (36.73%), Postives = 80/147 (54.42%), Query Frame = 1
Query:   31 LRAVYGGACEAELTARAVSPVTFKRKAAAWSHEVKLRLPAALSPRHHLVFDFAHVNCEKAAKGAAPLETPLGFAAAPLLAEGRPLADGAQLLPVAAAKLPTYLSAEAQ--------ANCR-WVDNKKPLFAFRTRLVSSVLAQNGQL 444
            L++VYG      L    ++ V +  K   +S E+K+ LPA L+P HHL+  F H+ C+K  K    + TPLGF+   L  +   + DG    P+     P YL+ EA+         N + WVDNKKPLF+F+TR++SS+  Q+  L
Sbjct:  628 LKSVYGTTTSPLLCCSFITSVVYHNKKPKFSDEIKINLPAKLTPNHHLLVTFYHLGCKKTKKADNSVNTPLGFSVVRLFDDDCIIVDGKYKSPIGTVFPPRYLAHEAKDIKDQKDATNHKVWVDNKKPLFSFKTRVISSLYPQDHTL 774          
BLAST of mRNA_M-pyrifera_M_contig127477.5534.1 vs. uniprot
Match: UPI001885F8C4 (dedicator of cytokinesis protein 11 isoform X1 n=2 Tax=Syngnathus acus TaxID=161584 RepID=UPI001885F8C4)

HSP 1 Score: 94.4 bits (233), Expect = 2.480e-19
Identity = 57/155 (36.77%), Postives = 92/155 (59.35%), Query Frame = 1
Query:    1 DTDEDPDAPPLRAVYGGACEAELTARAVSPVTFKRKAAAWSHEVKLRLPAALSPRHHLVFDFAHVNCEKAAKGAAPLETPLGFAAAPLLAEGRPLADGAQLLPVAAAKLPTYLSAEAQAN---CRWVDNKKPLFAFRTRLVSSVLAQNGQLHAFF 456
            D+DE+  A PL+ +YG   ++  T+ A + V    ++  +  EVK+ LP  L  +HH++F F H++CE ++K    +E+ +G +  PLL +GR  +   QL PVAA     YL  + + +    +WV+N KPLF  R+R+VS++ AQ+  LH FF
Sbjct:  690 DSDEE-GATPLKCIYGKPGDSLFTSSAYAAVLHHNQSPEFYDEVKMELPVHLHEKHHILFTFYHISCESSSKKREAVESLVGHSWLPLLKDGRMQSTELQL-PVAATLPAGYLGQDTRKSHPDIKWVENAKPLFKMRSRVVSTIYAQDLHLHKFF 842          
BLAST of mRNA_M-pyrifera_M_contig127477.5534.1 vs. uniprot
Match: UPI000644E340 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644E340)

HSP 1 Score: 92.8 bits (229), Expect = 8.510e-19
Identity = 55/138 (39.86%), Postives = 78/138 (56.52%), Query Frame = 1
Query:   31 LRAVYGGACEAELTARAVSPVTFKRKAAAWSHEVKLRLPAALSPRHHLVFDFAHVNCEKAAKGAAPLETPLGFAAAPLLAEGRPLADGAQLLPVAAAKLPTYLSAEA--QANCR-WVDNKKPLFAFRTRLVSSVLAQN 435
            ++AV+G +    LT R  + V +  K   ++ E+K+ LP+ L+P HHL+  F H+ C  + K   P E  LG  A  L  E + +ADG    PVA    P YL  E   Q N + WVDNKKP+F FRTR++S+V  Q+
Sbjct:  609 MKAVFGTSTSPLLTRRFYTTVVYHNKKPEFTDEIKINLPSHLTPNHHLLVTFYHLGCRPSKKNEKP-EVCLGHCAIRLFEEDKVIADGKYRKPVATVFPPKYLDMELKEQTNSKMWVDNKKPIFKFRTRVLSTVYPQD 745          
BLAST of mRNA_M-pyrifera_M_contig127477.5534.1 vs. uniprot
Match: UPI00094E9447 (dedicator of cytokinesis protein 11 isoform X1 n=3 Tax=Hippocampus comes TaxID=109280 RepID=UPI00094E9447)

HSP 1 Score: 92.8 bits (229), Expect = 8.540e-19
Identity = 58/159 (36.48%), Postives = 95/159 (59.75%), Query Frame = 1
Query:    1 DTDEDPDAPPLRAVYGGACEAELTARAVSPVTFKRKAAAWSHEVKLRLPAALSPRHHLVFDFAHVNCEKAAKGAAP----LETPLGFAAAPLLAEGRPLADGAQLLPVAAAKLPTYLSAE---AQANCRWVDNKKPLFAFRTRLVSSVLAQNGQLHAFF 456
            D+DE+  A PL+ +YG   ++  T+ A + V    ++  +  EVKL LP  L  +HH++F F H++CE ++K ++     +E+ +G++  PLL +GR  +   QL PVA      YL  +   +Q + +WV+N KPLF  R+R+VS++ AQ+  LH FF
Sbjct:  690 DSDEE-GASPLKCIYGKPGDSLFTSSAYAAVLHHNQSPEFYDEVKLELPVHLHEKHHILFTFYHISCESSSKTSSKKRDGVESLVGYSWLPLLKDGRMQSTELQL-PVAVTLPAGYLGQDTRKSQPDIKWVENAKPLFKMRSRVVSTIYAQDLHLHKFF 846          
BLAST of mRNA_M-pyrifera_M_contig127477.5534.1 vs. uniprot
Match: A0A151ZAV1_9MYCE (DOCK family protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZAV1_9MYCE)

HSP 1 Score: 91.7 bits (226), Expect = 2.150e-18
Identity = 52/141 (36.88%), Postives = 80/141 (56.74%), Query Frame = 1
Query:   31 LRAVYGGACEAELTARAVSPVTFKRKAAAWSHEVKLRLPAALSPRHHLVFDFAHVNCEKAAKGAAPLETPLGFAAAPLLAEGRPLADGAQLLPVAAAKLPTYLSAEAQ-----ANCR-WVDNKKPLFAFRTRLVSSVLAQN 435
            L+ +YG +    LT +  + V +  +   ++ E+K+ LPA L+P HHL+  F H+ C ++ K   P E PLG+ A  L    + + D     PVA    P YL+ EA+      N + WVDNKKP+F+FRTR++SS+  Q+
Sbjct:  579 LKNIYGTSLNPILTRKFYTQVIYHNRKPKFTDEIKINLPANLTPNHHLLVTFYHLGCRQSKKSDKP-EVPLGYCAIRLFENDQIIVDNKYKKPVATVFPPKYLAEEAKDPKDPTNLKMWVDNKKPVFSFRTRVISSIYPQD 718          
BLAST of mRNA_M-pyrifera_M_contig127477.5534.1 vs. uniprot
Match: Q54CA8_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54CA8_DICDI)

HSP 1 Score: 91.7 bits (226), Expect = 2.160e-18
Identity = 51/147 (34.69%), Postives = 82/147 (55.78%), Query Frame = 1
Query:   31 LRAVYGGACEAELTARAVSPVTFKRKAAAWSHEVKLRLPAALSPRHHLVFDFAHVNCEKAAKGAAPLETPLGFAAAPLLAEGRPLADGAQLLPVAAAKLPTYLSAEAQ--------ANCR-WVDNKKPLFAFRTRLVSSVLAQNGQL 444
            ++  +G +    LT   ++ V +  K   +S E+K+ LP+ L+  HHL+  F H+ C+K+ K   P+ TPLG++   L  + R + DG    PV     P YL+ EA+         N + WVDNKKP+F+F+TR++SS+  Q+  L
Sbjct:  681 MKNTHGTSTTPLLTCSFLTSVVYHNKKPKFSDEIKINLPSNLTANHHLLVTFYHLGCKKSKKSENPMHTPLGYSVVRLFEQDRIICDGKYKRPVGTVFPPRYLAQEAKDIKDSKDTINHKIWVDNKKPVFSFKTRVISSLYPQDPTL 827          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127477.5534.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
L8H9P5_ACACA3.140e-2339.87DOCK family protein n=1 Tax=Acanthamoeba castellan... [more]
F4Q9T6_CAVFA9.860e-2040.58DOCK family protein n=1 Tax=Cavenderia fasciculata... [more]
A0A8J4V2P4_9MYCE1.340e-1934.51Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
Q86I66_DICDI1.340e-1932.03Uncharacterized protein n=1 Tax=Dictyostelium disc... [more]
F0ZPJ5_DICPU2.480e-1936.73Uncharacterized protein n=1 Tax=Dictyostelium purp... [more]
UPI001885F8C42.480e-1936.77dedicator of cytokinesis protein 11 isoform X1 n=2... [more]
UPI000644E3408.510e-1939.86hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
UPI00094E94478.540e-1936.48dedicator of cytokinesis protein 11 isoform X1 n=3... [more]
A0A151ZAV1_9MYCE2.150e-1836.88DOCK family protein n=1 Tax=Tieghemostelium lacteu... [more]
Q54CA8_DICDI2.160e-1834.69Uncharacterized protein n=1 Tax=Dictyostelium disc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig127477contigM-pyrifera_M_contig127477:5..505 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score102.1
Seed ortholog evalue2.7e-19
Seed eggNOG ortholog31033.ENSTRUP00000016512
Preferred nameDOCK9
KEGG koko:K21853
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005085,GO:0005088,GO:0005089,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0007596,GO:0007599,GO:0008150,GO:0009611,GO:0017016,GO:0017048,GO:0019899,GO:0031267,GO:0032501,GO:0042060,GO:0043085,GO:0043087,GO:0043547,GO:0044093,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0050817,GO:0050878,GO:0050896,GO:0051020,GO:0051336,GO:0051345,GO:0065007,GO:0065008,GO:0065009,GO:0098772
EggNOG free text desc.dedicator of cytokinesis
EggNOG OGs38C96@33154,3BA61@33208,3CR5D@33213,47ZYV@7711,48UXM@7742,49YM6@7898,KOG1997@1,KOG1997@2759
COG Functional cat.T
Best tax levelActinopterygii
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons1
Model size501
Cds size501
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815789.0797503-CDS-M-pyrifera_M_contig127477:4..5051622815789.0797503-CDS-M-pyrifera_M_contig127477:4..505Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig127477 5..505 -
1692277570.2982454-CDS-M-pyrifera_M_contig127477:4..5051692277570.2982454-CDS-M-pyrifera_M_contig127477:4..505Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig127477 5..505 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig127477.5534.1prot_M-pyrifera_M_contig127477.5534.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig127477 5..505 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig127477.5534.1

>prot_M-pyrifera_M_contig127477.5534.1 ID=prot_M-pyrifera_M_contig127477.5534.1|Name=mRNA_M-pyrifera_M_contig127477.5534.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=167bp
DTDEDPDAPPLRAVYGGACEAELTARAVSPVTFKRKAAAWSHEVKLRLPA
ALSPRHHLVFDFAHVNCEKAAKGAAPLETPLGFAAAPLLAEGRPLADGAQ
LLPVAAAKLPTYLSAEAQANCRWVDNKKPLFAFRTRLVSSVLAQNGQLHA
FFAQAEAGADSFQLEQA
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mRNA from alignment at M-pyrifera_M_contig127477:5..505-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig127477.5534.1 ID=mRNA_M-pyrifera_M_contig127477.5534.1|Name=mRNA_M-pyrifera_M_contig127477.5534.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=501bp|location=Sequence derived from alignment at M-pyrifera_M_contig127477:5..505- (Macrocystis pyrifera P11B4 male)
GACACGGACGAGGACCCGGACGCGCCGCCCCTGCGTGCGGTCTACGGCGG CGCCTGCGAGGCAGAGCTCACGGCGCGCGCCGTGTCGCCAGTTACCTTCA AGCGCAAGGCGGCGGCCTGGTCGCACGAGGTGAAGCTGCGGCTGCCCGCC GCCCTCTCGCCGCGCCACCACCTCGTCTTCGACTTTGCGCACGTCAACTG CGAGAAGGCCGCCAAGGGCGCGGCGCCGCTGGAGACGCCGCTGGGCTTTG CCGCCGCGCCGCTGCTGGCCGAGGGCAGGCCGCTGGCCGACGGCGCCCAG CTGCTGCCCGTGGCCGCCGCCAAGCTGCCCACCTACCTCTCGGCCGAGGC GCAGGCCAACTGCCGCTGGGTGGACAACAAGAAGCCGCTCTTCGCCTTCC GCACGCGCCTCGTCTCCTCGGTGCTGGCGCAGAACGGCCAGCTGCACGCC TTCTTCGCCCAGGCCGAGGCCGGCGCCGACTCCTTCCAGCTGGAGCAGGC C
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig127477:5..505-

>mRNA_M-pyrifera_M_contig127477.5534.1 ID=mRNA_M-pyrifera_M_contig127477.5534.1|Name=mRNA_M-pyrifera_M_contig127477.5534.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1002bp|location=Sequence derived from alignment at M-pyrifera_M_contig127477:5..505- (Macrocystis pyrifera P11B4 male)
GACACGGACGAGGACCCGGACGCGCCGCCCCTGCGTGCGGTCTACGGCGG
CGCCTGCGAGGCAGAGCTCACGGCGCGCGCCGTGTCGCCAGTTACCTTCA
AGCGCAAGGCGGCGGCCTGGTCGCACGAGGTGAAGCTGCGGCTGCCCGCC
GCCCTCTCGCCGCGCCACCACCTCGTCTTCGACTTTGCGCACGTCAACTG
CGAGAAGGCCGCCAAGGGCGCGGCGCCGCTGGAGACGCCGCTGGGCTTTG
CCGCCGCGCCGCTGCTGGCCGAGGGCAGGCCGCTGGCCGACGGCGCCCAG
CTGCTGCCCGTGGCCGCCGCCAAGCTGCCCACCTACCTCTCGGCCGAGGC
GCAGGCCAACTGCCGCTGGGTGGACAACAAGAAGCCGCTCTTCGCCTTCC
GCACGCGCCTCGTCTCCTCGGTGCTGGCGCAGAACGGCCAGCTGCACGCC
TTCTTCGCCCAGGCCGAGGCCGGCGCCGACTCCTTCCAGCTGGAGCAGGC
CGACACGGACGAGGACCCGGACGCGCCGCCCCTGCGTGCGGTCTACGGCG
GCGCCTGCGAGGCAGAGCTCACGGCGCGCGCCGTGTCGCCAGTTACCTTC
AAGCGCAAGGCGGCGGCCTGGTCGCACGAGGTGAAGCTGCGGCTGCCCGC
CGCCCTCTCGCCGCGCCACCACCTCGTCTTCGACTTTGCGCACGTCAACT
GCGAGAAGGCCGCCAAGGGCGCGGCGCCGCTGGAGACGCCGCTGGGCTTT
GCCGCCGCGCCGCTGCTGGCCGAGGGCAGGCCGCTGGCCGACGGCGCCCA
GCTGCTGCCCGTGGCCGCCGCCAAGCTGCCCACCTACCTCTCGGCCGAGG
CGCAGGCCAACTGCCGCTGGGTGGACAACAAGAAGCCGCTCTTCGCCTTC
CGCACGCGCCTCGTCTCCTCGGTGCTGGCGCAGAACGGCCAGCTGCACGC
CTTCTTCGCCCAGGCCGAGGCCGGCGCCGACTCCTTCCAGCTGGAGCAGG
CC
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