mRNA_M-pyrifera_M_contig12743.5523.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12743.5523.1 vs. uniprot
Match: D8LPW4_ECTSI (Phosphatidate cytidylyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPW4_ECTSI) HSP 1 Score: 349 bits (895), Expect = 4.990e-115 Identity = 216/389 (55.53%), Postives = 251/389 (64.52%), Query Frame = 1
Query: 1 MGLRERFMTAGVGIPLALWAIFCDARICLALFLGLQAICVQELNQLLRKTSAARAIAAA-VGAEDTRRPFFLQAIAAAVSLASAFGGRDASAVVMSVGTTLLVARRLALMRDHWEAASLAAERAAARKTKTRGKDGALDTRSGWSGRGVSVGVVESGVFLLALEGSAMAWLVGGWSSLAAIRFRASMGAADVVILLAIVFNSDNGGLFAGSLSKALRRRQRPHRSXXXXXXXXXXXXXXXXXXLSPPNRPTTTTATP----PGILSVASPNKTWVGVIGAVALGTATALALRPGLRLFSGAFFSSWSSSGRGGFIDPEEAFSLGGMGLGLLGGAGAGICVVGVVGDLWESLLKRMAMVKDSGTIFPGHGGCLDRLDGVLAAAPLYLAII 1152
MGLRERF+TA V +PLALWAIF DA +CL+L L LQA+CVQE+ +LLR+T AARAIAA VG F IA VSL +AF GRDA+ + M VG L+VARRL LMRDHW A+ L+AE K G G GV+E+GVFLLALE SAM W+V G SSL A+RFR S GAADVV LLA+VFNSDNGGL AGS+ K LRR+++ H S +PP TP PG+L+VASP KTWVGV G++ALGTATAL L L S G + FS+GGM G LG GAG+C+VGVVGDLWESLLKR AMVKDSGT+FPGHGGCLDRLDGVL AAPLYLA++
Sbjct: 1 MGLRERFLTAAVALPLALWAIFHDAWLCLSLVLVLQAVCVQEVGELLRRTRAARAIAATGVGVALLGSTFLFHVIAETVSLITAFCGRDAAGIAMCVGMALIVARRLVLMRDHWVASKLSAE-------KPVGVSGGXXXXXXXX---XXAGVMEAGVFLLALEISAMLWMVCGCSSLVALRFRGSRGAADVVFLLAVVFNSDNGGLLAGSMYKVLRRKRQLHLSSSELLQRHQRSSASQ----TPPAAAGAAEMTPGQKHPGLLTVASPGKTWVGVTGSIALGTATALTLEQALLFLLHEPLLSRVGESLPGEEERGGVFSVGGMSSGRLGVVGAGLCIVGVVGDLWESLLKRTAMVKDSGTVFPGHGGCLDRLDGVLTAAPLYLAVL 375
BLAST of mRNA_M-pyrifera_M_contig12743.5523.1 vs. uniprot
Match: UPI00066FC107 (phosphatidate cytidylyltransferase n=1 Tax=Frateuria defendens TaxID=2219559 RepID=UPI00066FC107) HSP 1 Score: 85.5 bits (210), Expect = 2.910e-15 Identity = 55/117 (47.01%), Postives = 61/117 (52.14%), Query Frame = 1
Query: 790 SPNKTWVGVIGAVALGTATALALRPGLRLFSGAFFSSWSSSGRGGFIDPEEAFSLGGMGLGLLGGAGAGICVVGVVGDLWESLLKRMAMVKDSGTIFPGHGGCLDRLDGVLAAAPLY 1140
SPNKTW GV GA+A G A LA W RGG + GL LL G +VGDL ESL KR A VKDSGT+FPGHGG LDRLD V AA P++
Sbjct: 173 SPNKTWAGVYGALAAGVAVVLA-------------GGWLLGVRGGQL----------FGLALLAVVAVG---ASIVGDLLESLFKRHAQVKDSGTLFPGHGGLLDRLDSVFAALPVF 263
BLAST of mRNA_M-pyrifera_M_contig12743.5523.1 vs. uniprot
Match: A0A4R3YKF2_9GAMM (Phosphatidate cytidylyltransferase n=1 Tax=Luteibacter rhizovicinus TaxID=242606 RepID=A0A4R3YKF2_9GAMM) HSP 1 Score: 85.5 bits (210), Expect = 2.960e-15 Identity = 55/119 (46.22%), Postives = 65/119 (54.62%), Query Frame = 1
Query: 790 SPNKTWVGVIGAVALGTATALALRPGLRLFSGAFFSSWSSSGRGGFIDPEEAFSLGGMGLGLLGGAGAGICVVGVVGDLWESLLKRMAMVKDSGTIFPGHGGCLDRLDGVLAAAPLYLA 1146
SP KTW GV GA+ G F++W G D + L +GLGLL A + VVGDL+ESLLKR A VKDSGT+FPGHGG LDRLD V AA P++ A
Sbjct: 173 SPGKTWAGVYGALVAGA-----------------FTAWLGGWLLGVPDTDHMLGL--IGLGLLTVAAS------VVGDLFESLLKRHADVKDSGTLFPGHGGLLDRLDSVFAALPVFAA 266
BLAST of mRNA_M-pyrifera_M_contig12743.5523.1 vs. uniprot
Match: UPI00055B7308 (phosphatidate cytidylyltransferase n=1 Tax=Luteibacter sp. 9135 TaxID=1500893 RepID=UPI00055B7308) HSP 1 Score: 82.8 bits (203), Expect = 2.560e-14 Identity = 54/120 (45.00%), Postives = 67/120 (55.83%), Query Frame = 1
Query: 790 SPNKTWVGVIGAVALGTATALALRPGLRLFSGAFFSSWSSSGRGGFIDPEEAFSLGGMG-LGLLGGAGAGICVVGVVGDLWESLLKRMAMVKDSGTIFPGHGGCLDRLDGVLAAAPLYLA 1146
SP KTW GV GA+ G+A A+ F W + +A L G+G LGLL V +VGDL+ESL+KR A VKDSG +FPGHGG LDRLD V AA P+++A
Sbjct: 172 SPGKTWAGVYGALVGGSAFAV-------------FGGW-------LLGVNDAPHLVGLGVLGLL------TVAVAIVGDLFESLMKRHAEVKDSGQLFPGHGGLLDRLDSVFAALPIFVA 265
BLAST of mRNA_M-pyrifera_M_contig12743.5523.1 vs. uniprot
Match: A0A5D8Z9A8_9GAMM (Phosphatidate cytidylyltransferase n=1 Tax=Lysobacter lacus TaxID=1643323 RepID=A0A5D8Z9A8_9GAMM) HSP 1 Score: 82.8 bits (203), Expect = 2.800e-14 Identity = 51/117 (43.59%), Postives = 65/117 (55.56%), Query Frame = 1
Query: 790 SPNKTWVGVIGAVALGTATALALRPGLRLFSGAFFSSWSSSGRGGFIDPEEAFSLGGMGLGLLGGAGAGICVVGVVGDLWESLLKRMAMVKDSGTIFPGHGGCLDRLDGVLAAAPLY 1140
SPNKTW G++G V +GT AL G LF+ +DP + L + A +V V+GDL+ESLLKR A KDSGT+ PGHGG LDR+D VLAA P++
Sbjct: 179 SPNKTWEGLVGGVVVGTLVAL----GFSLFA--------------HVDPRD--------LPKVALVAAASILVSVIGDLFESLLKRHAGKKDSGTLIPGHGGALDRIDAVLAALPVF 269
BLAST of mRNA_M-pyrifera_M_contig12743.5523.1 vs. uniprot
Match: A0A6I4J2D8_9SPHN (Phosphatidate cytidylyltransferase n=2 Tax=Sphingomonas TaxID=13687 RepID=A0A6I4J2D8_9SPHN) HSP 1 Score: 82.4 bits (202), Expect = 2.860e-14 Identity = 56/128 (43.75%), Postives = 69/128 (53.91%), Query Frame = 1
Query: 769 PGILSVASPNKTWVGVIGAVALGTATALALRPGLRLFSGAFFSSWSSSGRGGFIDPEEAFSLGGMGLGLLGGAGAGICVVGVVGDLWESLLKRMAMVKDSGTIFPGHGGCLDRLDGVLAAAPLYLAII 1152
P + SPNKTW G+IG G A+AL L GL L W +G + P+ AF A + V+ +GDL+ES LKR A VKDSGTI PGHGG LDRLDG++ AP A+I
Sbjct: 156 PKLAPTVSPNKTWAGLIG----GVASALIL--GLLL--------WQFAG----LPPQLAF------------ASPVLAVIAQIGDLYESWLKRQAGVKDSGTILPGHGGVLDRLDGLVPVAPAAAALI 253
BLAST of mRNA_M-pyrifera_M_contig12743.5523.1 vs. uniprot
Match: A4BS27_9GAMM (Phosphatidate cytidylyltransferase n=2 Tax=Nitrococcus mobilis TaxID=35797 RepID=A4BS27_9GAMM) HSP 1 Score: 82.0 bits (201), Expect = 4.090e-14 Identity = 66/210 (31.43%), Postives = 92/210 (43.81%), Query Frame = 1
Query: 508 LVGGWSSLAAIRFRASMGAADVVILLAIVFNSDNGGLFAGSLSKALRRRQRPHRSXXXXXXXXXXXXXXXXXXLSPPNRPTTTTATPPGILSVASPNKTWVGVIGAVALGTATALALRPGLRLFSGAFFSSWSSSGRGGFIDPEEAFSLGGMGLGLLGGAGAGICVVGVVGDLWESLLKRMAMVKDSGTIFPGHGGCLDRLDGVLAAAPL 1137
LV W ++ A + + G+ V +LL +V+ SD GG FAG RR+ P SP KTW GVIG++ LG L G +++ + G P + +GL LL + +VGDL+ES+LKR +KDSG + PGHGG LDR+DG+LAAAP+
Sbjct: 107 LVAFWFAIVATHDKEAFGSYWVTMLLFLVWGSDTGGYFAGRTWG--RRKLAPR----------------------------------------LSPGKTWEGVIGSMILGV-----------LLGGVYYACGRALG----FAPAGTSLIALLGLALL------TIGISIVGDLFESMLKRQRGIKDSGGLLPGHGGVLDRIDGLLAAAPI 253
BLAST of mRNA_M-pyrifera_M_contig12743.5523.1 vs. uniprot
Match: A0A1I0M6L1_9GAMM (Phosphatidate cytidylyltransferase n=2 Tax=unclassified Luteibacter TaxID=2620188 RepID=A0A1I0M6L1_9GAMM) HSP 1 Score: 82.0 bits (201), Expect = 4.760e-14 Identity = 57/119 (47.90%), Postives = 64/119 (53.78%), Query Frame = 1
Query: 790 SPNKTWVGVIGAVALGTATALALRPGLRLFSGAFFSSWSSSGRGGFIDPEEAFSLGGMGLGLLGGAGAGICVVGVVGDLWESLLKRMAMVKDSGTIFPGHGGCLDRLDGVLAAAPLYLA 1146
SP KTW GV GAVA G AL GGF+ GG +GLL G V VVGDL+ESL+KR A VKDSG IFPGHGG LDRLD V AA P+++A
Sbjct: 172 SPGKTWAGVYGAVAAGGLVALL---------------------GGFL---LGVRDGGQLVGLLV-LGVVTVAVAVVGDLFESLMKRHASVKDSGNIFPGHGGLLDRLDSVFAAIPVFVA 265
BLAST of mRNA_M-pyrifera_M_contig12743.5523.1 vs. uniprot
Match: A0A833GKC0_9GAMM (Phosphatidate cytidylyltransferase n=1 Tax=Dokdonella sp. TaxID=2291710 RepID=A0A833GKC0_9GAMM) HSP 1 Score: 79.7 bits (195), Expect = 6.830e-14 Identity = 52/119 (43.70%), Postives = 65/119 (54.62%), Query Frame = 1
Query: 790 SPNKTWVGVIGAVALGTATALALRPGLRLFSGAFFSSWSSSGRGGFIDPEEAFSLGGMGLGLLGGAGAGICVVGVVGDLWESLLKRMAMVKDSGTIFPGHGGCLDRLDGVLAAAPLYLA 1146
SPNKTW GV GA AL AL W +D + + G +G+ LL A + +VGDL ESLLKR A VKDSG++FPGHGG LDR D +LAA P+++A
Sbjct: 85 SPNKTWAGVWGAFALAGVVALV-------------GGW-------LLDWRDGWLAGLLGVALLTVAAS------IVGDLIESLLKRHANVKDSGSLFPGHGGLLDRADSLLAALPVFVA 177
BLAST of mRNA_M-pyrifera_M_contig12743.5523.1 vs. uniprot
Match: A0A0G9H874_9GAMM (Phosphatidate cytidylyltransferase n=4 Tax=Luteibacter TaxID=242605 RepID=A0A0G9H874_9GAMM) HSP 1 Score: 80.5 bits (197), Expect = 1.640e-13 Identity = 53/119 (44.54%), Postives = 64/119 (53.78%), Query Frame = 1
Query: 790 SPNKTWVGVIGAVALGTATALALRPGLRLFSGAFFSSWSSSGRGGFIDPEEAFSLGGMGLGLLGGAGAGICVVGVVGDLWESLLKRMAMVKDSGTIFPGHGGCLDRLDGVLAAAPLYLA 1146
SP KTW GV GA+ G S+ + G I E L +GLG+LG G VVG DL+ESL+KR A VKDSG++FPGHGG LDRLD V AA P++ A
Sbjct: 172 SPGKTWAGVYGAIVAG--------------------SFITVLGGYLIGVRETSQL--VGLGVLGVITVGFAVVG---DLFESLMKRHASVKDSGSLFPGHGGLLDRLDSVFAALPIFAA 265 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12743.5523.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12743.5523.1 >prot_M-pyrifera_M_contig12743.5523.1 ID=prot_M-pyrifera_M_contig12743.5523.1|Name=mRNA_M-pyrifera_M_contig12743.5523.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=384bp MGLRERFMTAGVGIPLALWAIFCDARICLALFLGLQAICVQELNQLLRKTback to top mRNA from alignment at M-pyrifera_M_contig12743:1304..7991- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12743.5523.1 ID=mRNA_M-pyrifera_M_contig12743.5523.1|Name=mRNA_M-pyrifera_M_contig12743.5523.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6688bp|location=Sequence derived from alignment at M-pyrifera_M_contig12743:1304..7991- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12743:1304..7991- >mRNA_M-pyrifera_M_contig12743.5523.1 ID=mRNA_M-pyrifera_M_contig12743.5523.1|Name=mRNA_M-pyrifera_M_contig12743.5523.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2304bp|location=Sequence derived from alignment at M-pyrifera_M_contig12743:1304..7991- (Macrocystis pyrifera P11B4 male)back to top |