mRNA_M-pyrifera_M_contig12742.5522.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig12742.5522.1
Unique NamemRNA_M-pyrifera_M_contig12742.5522.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig12742.5522.1 vs. uniprot
Match: A0A6H5J951_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J951_9PHAE)

HSP 1 Score: 426 bits (1096), Expect = 4.530e-143
Identity = 270/428 (63.08%), Postives = 317/428 (74.07%), Query Frame = 1
Query:   43 KRHKLAKVMGGSAPDNRNSSSSRVVGGG---KSKRLRPKRGDEAMDVDDDLSKVTAAAAVIEEEKPKLREVLEELRARSKGLAEKVATLAARAAGEVAEDPGPRDEGASFFAAKQTLLLSYCREVCSYAAAKATGQAIHGTGVAGRMVELRTVMEKLRPMDRKLKYQTDKLLRLA-SAGPKSVAFSEAGDDEDDPLSFRPRPEAMALRGEEPDGTGEISRNGDSERSGSALAQTREGSESGLYRVPRLSSVPYDEDGVAVPGGGGARRNERRLEKRLDKLRRGEVMETLREEFGEQPETVKAPGNAGAAGVSENKMKRLLDEDQERLDFEEDHMVRLTVTRKAKKARAQMEKDAGRLETIADVGSAADFVRAAKDADGFGVEMEGGEDDVFSGGRGRRGRXXXXX--ALGRAMGAVGGSLPRGGKRRG 1308
            KR KL K +      NR+++ +   GG    K++R     G  AM+V+ D      A A+IE EKP+L + LEELR R++ + EKVA+L+ RA  E+ EDP PR EGASF A KQTLLLSYCRE+CSYAAAKA G+A+ G G AGR+VELRTVMEKLRPMDRKLKYQTDKLLR+A SAG  +         +DDPLSFRPRPE MA  GE+P    E S   D+ERS S+  +  E  + GLYR PRL+S+PYDEDG++     GA R E+RLE+R DKLRRGEVMETLREEFGEQPETV+A GNAGA+GVSE KMK+LL+ED+ERLDFEEDHMVRLTVTRKAKKARA+MEKDAGRLETIADVGSAADF+R AK+ADGFG +MEGG+DD F         XXXXX  ALGRAMGAVGGS+  GG   G
Sbjct:   63 KRRKLPKAV-----TNRSANETPAGGGAAIAKNQRSSNGSGKTAMEVEGDGKINKEAKALIELEKPRLWQTLEELRDRARDVEEKVASLSERAREEMDEDPWPRHEGASFLALKQTLLLSYCREICSYAAAKARGEALGGGGAAGRLVELRTVMEKLRPMDRKLKYQTDKLLRVAASAGGSADGEVGGSGGDDDPLSFRPRPEGMAPWGEDPSTAAEDS-GIDAERSSSSAGRGGEADQEGLYRAPRLASMPYDEDGLST----GAARGEKRLERRRDKLRRGEVMETLREEFGEQPETVRAVGNAGASGVSEAKMKKLLEEDKERLDFEEDHMVRLTVTRKAKKARARMEKDAGRLETIADVGSAADFIRVAKNADGFGADMEGGDDDAFGXXXXXXXXXXXXXXXALGRAMGAVGGSMSGGGYAEG 480          
BLAST of mRNA_M-pyrifera_M_contig12742.5522.1 vs. uniprot
Match: A0A4D9DG17_9STRA (Sas10 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DG17_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.800e-32
Identity = 113/305 (37.05%), Postives = 164/305 (53.77%), Query Frame = 1
Query:  229 PKLREVLEELRARSKGLAEKVATLAARAAGEVAEDP----GPRDEGASFFAAKQTLLLSYCREVCSYAAAKATGQAIHGTGVAGRMVELRTVMEKLRPMDRKLKYQTDKLLRLASAGPKSVAFSEAGDDEDDPLSFRPRPEAMA-LRGEE--PDGTGEISRNGDSERSGSALAQTREGSESGLYRVPRLSSVPYDEDGVAVPGGGGARRNERRLEKRLDKLRRGEVMETLREEFGEQPETVKAPGNAGAAGVSENKMKRLLDEDQERLDFEEDHMVRLTVTRKAKKARAQMEKDAGRLETIADVG 1122
            P+L  +LE+ + +   L ++V  LA     E+A D        +EG ++   KQ LLL+YC  +  Y   KA G+A+    V  ++VELR  MEK+RP+D KLKY  D+L ++AS    S          DDPLSFRP P+ +   RG++   DG G+   N +             G    LYR PRL++VPY E    V GG  +++ E    KRL+KLRR E+++TL E++ ++PE V     A    +  +  +R  D ++ER  FEE+   RL  +R+ KKAR    + A RLETIAD+G
Sbjct:  235 PELLTLLEDFKDKLSELQDRVEPLA-----EMARDGTCAVSLNEEGVAYLEVKQQLLLNYCLNLTYYLLLKAEGRAVKDHPVIAQLVELRVAMEKMRPLDAKLKYHLDRLTKVASVDGSSRIH-------DDPLSFRPNPDLLVGKRGQDRVEDGNGKDLDNTEGN-----------GHREVLYRPPRLAAVPYGEK-TGVDGGRESKK-EALARKRLEKLRRSELLQTLTEQYRDKPELV-----AEHKSLENSVQQRADDAEEERRVFEEERFTRLVTSRRDKKARRLANEQATRLETIADIG 509          
BLAST of mRNA_M-pyrifera_M_contig12742.5522.1 vs. uniprot
Match: A0A835ZC79_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC79_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.840e-31
Identity = 122/384 (31.77%), Postives = 176/384 (45.83%), Query Frame = 1
Query:  235 LREVLEELRARSKGLAEKVATLAARAAGEVAEDPGPRDEGASFFAAKQTLLLSYCREVCSYAAAKATGQAIHGTGVAGRMVELRTVMEKLRPMDRKLKYQTDKLLRLASAGPKSVAFSEAGDDED---------DPLSFRPRPEAMALRG-----------------EEPD-GTGEISRNGDSERSGSALAQTREGSESGLYRVPRLSSVPYDEDGVAVPGGGGARRNERRLEKRLDKLRRGEVMETLREEFGEQPETVKAPGNAGAAGVSENKMKRLLDEDQERLDFEEDHMVRLTVTRKAKKARAQMEKDAGRLETIADVGSAADFVRAAKDADGFGVEMEGGEDDVFSGGRGRRGRXXXXXALGRAMGAVGGSLPRGGKRR 1305
            LR+V+E+   +++ +  KV  L  R   E     G   +G S+  AKQ +LLSYC  +C Y   K  G+ +       +++ELR  +E+LRP+D +LKYQ DKL R A+A                        DPLSFRP P+A+  +                   EP  G           R G          +SG YR PR+++VPY+EDG A    G  RR+ERR+E+R D+ R GE++ETLREEFG++PE V+  G +G   V++   ++L  E+                                  +TIADVG+  DF+R   D +G GV +           RGR  +     A+G A+G   GSL R  K++
Sbjct:   27 LRQVMEDFDEKAQEVQSKVDDLLLRLEQEKDARVG---DGVSYLVAKQQMLLSYCLNLCVYLGRKLRGEGVADHAATWQLLELRGALERLRPLDARLKYQLDKLFRAAAAPXXXXXXXXXXXXXXXXXXXXXXADPLSFRPNPDALVAKDGGXXXXXXXXXXXXXXXXEPRLGGYRAKAAARGRRGGXXXXXXXXXXDSGAYRAPRMAAVPYEEDGAA----GTRRRDERRVERRRDRARTGEILETLREEFGDRPEVVRGGGGSGM--VNDQARRKLDREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTIADVGNVGDFMRLGDDEEG-GVGV-----------RGRGPKSGSKRAVGGALGMAVGSLGRKHKKQ 389          
BLAST of mRNA_M-pyrifera_M_contig12742.5522.1 vs. uniprot
Match: A0A835YU38_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU38_9STRA)

HSP 1 Score: 131 bits (330), Expect = 5.780e-30
Identity = 114/353 (32.29%), Postives = 163/353 (46.18%), Query Frame = 1
Query:  235 LREVLEELRARSKGLAEKVATLAARAAGEVAEDPGPRDEGASFFAAKQTLLLSYCREVCSYAAAKATGQAIHGTGVAGRMVELRTVMEKLRPMDRKLKYQTDKLLRLASAGPKSVAFSEAGDDED---------DPLSFRPRPEAMALRG-----------------EEPD-GTGEISRNGDSERSGSALAQTREGSESGLYRVPRLSSVPYDEDGVAVPGGGGARRNERRLEKRLDKLRRGEVMETLREEFGEQPETVKAPGNAGAAGVSENKMKRLLDEDQERLDFEEDHMVRLTVTRKAKKARAQMEKDAGRLETIADVGSAADFVRAAKDADGFGVEMEG---GEDDVF 1203
            LR+V+E+   +++ +  KV  L  R   E     G   +G S+  AKQ +LLSYC  +C Y   K  G+ +       +++ELR  +E+LRP+D +LKYQ DKL R A+A                        DPLSFRP P+A+  +                   EP  G           R G          +SG YR PR+++VPY+EDG A    G  RR+ERR+E+R D+ R GE++ETLREEFG++PE V+  G +G   V++   ++L  E+                                  +TIADVG+  DF+R   D +G GV + G   G D V 
Sbjct:   27 LRQVMEDFDEKAQEVQSKVDDLLLRLEQEKDARVG---DGVSYLVAKQQMLLSYCLNLCVYLGRKLRGEGVADHAATWQLLELRGALERLRPLDARLKYQLDKLFRAAAAPXXXXXXXXXXXXXXXXXXXXXXADPLSFRPNPDALVAKDGGXXXXXXXXXXXXXXXXEPRLGGYRAKAAARGRRGGXXXXXXXXXXDSGAYRAPRMAAVPYEEDGAA----GTRRRDERRVERRRDRARTGEILETLREEFGDRPEVVRGGGGSGM--VNDQARRKLDREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTIADVGNVGDFMRLGDDEEG-GVGIRGTGNGSDGVL 369          
BLAST of mRNA_M-pyrifera_M_contig12742.5522.1 vs. uniprot
Match: A0A836CGQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGQ1_9STRA)

HSP 1 Score: 112 bits (280), Expect = 2.250e-24
Identity = 96/300 (32.00%), Postives = 141/300 (47.00%), Query Frame = 1
Query:  235 LREVLEELRARSKGLAEKVATLAARAAGEVAEDPGPRDEGASFFAAKQTLLLSYCREVCSYAAAKATGQAIHGTGVAGRMVELRTVMEKLRPMDRKLKYQTDKLLRLASA----GPKSVAFSEAGDDED------DPLSFRPRPEAMALRGEEPDGTGEISRNGDSERSGSALAQTREGSESGLYRVPRLSSVPYDEDGVAVPGGGGARRNER---------------------RLEKRLDKLRRGEVMETLREEFGEQPETVKAPGNAGAAGVSENKMKRLLDEDQERLDFEEDHMVRL 1041
            LR+V+E+   +++ +  KV  L  R   E     G   +G S+  AKQ +LLSYC  +C Y   K  G+ +       +++ELR  +E+LRP+D +LKYQ DKL R A+A    G ++    +A +         DPLSFRP P+A+  +    DG             G                 PRL    Y     A    GG                           R+E+R D+ R GE++ETLREEFG++PE V+  G +G   V++   ++L  E++ER +FEEDHM+RL
Sbjct:   27 LRQVMEDFDEKAQEVQSKVDDLLLRLEQEKDARVG---DGVSYLVAKQQMLLSYCLNLCVYLGRKLRGEGVADHAATWQLLELRGALERLRPLDARLKYQLDKLFRAAAAPASGGARAAPHPDAAEHAXXXXXXADPLSFRPNPDALVAK----DG-------------GXXXXXXXXXXXXXXXXEPRLGG--YRAKAAARGRRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXRVERRRDRARTGEILETLREEFGDRPEVVRGGGGSGM--VNDQARRKLDREERERREFEEDHMIRL 302          
BLAST of mRNA_M-pyrifera_M_contig12742.5522.1 vs. uniprot
Match: A0A5D6XJV1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJV1_9STRA)

HSP 1 Score: 115 bits (287), Expect = 6.170e-24
Identity = 85/265 (32.08%), Postives = 138/265 (52.08%), Query Frame = 1
Query:  328 EDPGPRDEGASFFAAKQTLLLSYCREVCSYAAAKATG-QAIHGTGVAGRMVELRTVMEKLRPMDRKLKYQTDKLLRLASAGPKSVAFSEAGDDEDDPLSFRPRPEAMALRGEEPDGTGEISRNGDSERSGSALAQTREGSESGLYRVPRLSSVPYDEDGVAVPGGGGARRNERRLEKRLDKLRRGEVMETLREEFGEQPETVKAPGNAGAAGVSENKMKRLLDEDQERLDFEEDHMVRLTVTRKAKKARAQMEKDAGRLETIADV 1119
            E+  P +EG S+   K   LL+Y +    +A  K    + +    V   +V  RT++E++RP+DRKLKYQ DK+L++A +G         G D D+ L++ P P+ +  +       G+   + DS R G+A       S+ G+YR PRL+SVPYDE+         A +  +R E+   ++++  ++  LREEF E+P  + A G++          K L  E+ E+ D+EE   VRL  +RK K  + Q E++A R + +  V
Sbjct:   30 ENDLPTEEGMSYLQVKNHALLAYTKLELFFALLKLEAPERVRDHAVFKELVRYRTLLERVRPLDRKLKYQIDKMLKVAVSG---------GKDMDESLNYAPNPDQLVGQ------DGQADSDDDSGRPGAA-------SKDGIYRAPRLASVPYDEEEKE------AAKKAKREERNRKRMQKSTILSELREEFSERPTEIFAGGSSAVD-------KELAREEAEKKDYEESRFVRLVTSRKDKIRKRQREQEANRADNVGSV 259          
BLAST of mRNA_M-pyrifera_M_contig12742.5522.1 vs. uniprot
Match: A0A2K5F1C8_AOTNA (Neuroguidin n=2 Tax=Eutheria TaxID=9347 RepID=A0A2K5F1C8_AOTNA)

HSP 1 Score: 110 bits (274), Expect = 1.940e-23
Identity = 95/304 (31.25%), Postives = 151/304 (49.67%), Query Frame = 1
Query:  199 AAAAVIEEEKPKLREVLEELRARSKGLAEKVATLAARAAGEVAEDPGPRDEGASFFAAKQTLLLSYCREVCSYAAAKATGQAIHGTGVAGRMVELRTVMEKLRPMDRKLKYQTDKLLRLASAGPKSVAFSEAGDDEDDPLSFRPRPEAMALRGEEPDGTGEISRNGDSERSGSALAQTREGSESGLYRVPRLSSVPYDEDGVAVPGGGGARRNERRLEKRLDKLRRGEVMETLREEFGEQPETVKAPGNAGAAGVSENKMKRLLDEDQERLDFEEDHMVRLTVTRKAKKARAQMEKDAGRLETI 1110
            AA  V+E + P    +L+ L+ +   +  +V +L  +    V     P ++G SF   K  LLL Y  ++      KA+G+++ G     R+VE+RTV+EKLRP+D+KLKYQ DKL++ A  G  S         E+DPL F+P P  M  +    D   + + +G SE SG    +      S  Y  PRL  V YDE          A R ++RLE+   +     V+  L+E++ + PE ++   +      S+        EDQ R+++EE  MVRL+V++K K  R +    + +L ++
Sbjct:    2 AAQGVLESDLPSAVTLLKNLQEQVMAVTAQVQSLTKK----VQAGAYPTEKGLSFLEVKDQLLLMYLMDLTHLILDKASGRSLQGHDAVLRLVEIRTVLEKLRPLDQKLKYQIDKLVKTAVTGSLS---------ENDPLRFKPHPSNMMSKLNSEDEEDDEAEDGQSEASGKKSVK----GVSKKYVPPRLVPVHYDETE--------AEREKQRLERAKRRALSSSVIRELKEQYSDAPEEIRDARHPHVTRQSQ--------EDQHRINYEESMMVRLSVSKKEKGRRKRANVMSSQLHSL 272          
BLAST of mRNA_M-pyrifera_M_contig12742.5522.1 vs. uniprot
Match: A0A8J6CFT6_DIALT (Sas10 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CFT6_DIALT)

HSP 1 Score: 114 bits (284), Expect = 2.060e-23
Identity = 99/287 (34.49%), Postives = 151/287 (52.61%), Query Frame = 1
Query:  211 VIEEEKPKLREVLEELRARSKGLAEKVATLAARA-AGEVAEDPGPRDEGASFFAAKQTLLLSYCREVCSYAAAKATGQAIHGTGVAGRMVELRTVMEKLRPMDRKLKYQTDKLLRLASA-GPKSVAFSEAGDDEDDPLSFRPRPEAMALRGEEPDGTGEISRNGDSERSGSALAQTREGSES-GLYRVPRLSSVPYDEDGVAVPGGGGARRNERRLEKRLDKLRRGEVMETLREEFGEQPETVKAPGNAGAAGVSENKMKRLLDEDQERLDFEEDHMVRLTVTRKAK 1062
            V+  + P+L  +L +L+++      +VA L A A AGE+    G       +   K  LLLSYC  V  + A KA+G A+    V  ++V LR V EKL P+D+KL++Q D+LL+LASA G    A    G       S RP P A+  +G E  G  +          G   A  R+G+ + G+YR P+L++V YD D      G   +++ER   +RL++  R  ++  LR EFG++PE + A   A     +    +RL  +++ER  +EE+H VRL +T+K K
Sbjct:  273 VVSRDAPELLMLLADLKSKLDETRSRVAPLVAAAGAGELRVGGG-----LGYLQTKLQLLLSYCTNVAFFLALKASGAAVRDHPVIAQLVRLRAVFEKLGPLDKKLRFQVDRLLQLASADGGADGARGATG-------SARPNPRALIAKGAE--GLADDXXXXXXXXXG---APRRKGAATDGIYRPPKLAAVEYDGD-APTELGKKVKKSERDAARRLERASRSALVRELRNEFGDEPEELAAVDLATGPRATGAASERLARDEEERRRYEEEHFVRLQLTKKQK 541          
BLAST of mRNA_M-pyrifera_M_contig12742.5522.1 vs. uniprot
Match: UPI0018858E46 (neuroguidin-like isoform X1 n=4 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI0018858E46)

HSP 1 Score: 110 bits (275), Expect = 2.140e-23
Identity = 93/272 (34.19%), Postives = 140/272 (51.47%), Query Frame = 1
Query:  286 KVATLAARAAGEVAEDPGPRDEGASFFAAKQTLLLSYCREVCSYAAAKATGQAIHGTGVAGRMVELRTVMEKLRPMDRKLKYQTDKLLRLASAGPKSVAFSEAGDDEDDPLSFRPRPEAMALRGEEPDGTGEISRNGDSERSGSALAQTREGSESGLYRVPRLSSVPYDEDGVAVPGGGGARRNERRLEKRLDKLRRGEVMETLREEFGEQ----PETVKAPGNAGAAGVSENKMKRLLDEDQERLDFEEDHMVRLTVTRKAKKARAQMEKD 1089
            K ++L A    +V +       G SF   K  LLLSY  ++    + K  G++I G     R+VELRTV+E++RP+D+KL+YQ DKL+R+A+ G       + G  E DPL F+P+P  +A R ++  G+G  S     E +  A  Q  +G+   LY  PR+++VPYD D  A          E R E+RL   RR  +  ++ +E G Q    PE V          +S+    R   E+ ER  +EED MVRL  T++ ++ R ++  D
Sbjct:   48 KTSSLVAALTAKVKDGQLDTAHGLSFLEMKNYLLLSYLADLTQVMSLKLRGRSIAGDASVDRLVELRTVLERIRPIDQKLRYQVDKLVRIATTG-------QLG--EGDPLRFKPQPGNLASRLDDEAGSGSDS----DEPAAGAGRQKSDGA--ALYVPPRIAAVPYDGDETA----------ESRRERRLAAARRRALSSSVMQELGRQYLDTPEEVH--------DLSDTYRNRSTREEAERTKYEEDFMVRLPETKQDQRRRRELTTD 286          
BLAST of mRNA_M-pyrifera_M_contig12742.5522.1 vs. uniprot
Match: A0A7S2R5P9_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R5P9_9STRA)

HSP 1 Score: 111 bits (277), Expect = 2.180e-23
Identity = 94/319 (29.47%), Postives = 153/319 (47.96%), Query Frame = 1
Query:  343 RDEGASFFAAKQTLLLSYCREVCSYAAAKATGQAIHGTGVAG---RMVELRTVMEKLRPMDRKLKYQTDKLLRLASAGPKSVAFSEAGDD-------EDDPLSFRPRPEAMALRGEEPDGTGEISRNGDSERSG-----------SALAQTREG-----------SESGLYRVPRLSSVPYDEDGVAVPGGGGARRNERRLEKRLDKLRRGEVMETLREEFGEQPETVKAPGNAGAAGVSENKMKRLLDEDQERLDFEEDHMVRLTVTRKAKKARAQ-MEKDAGRLETIADVGSAADFVRAAKDADGFGVEMEGGEDDV 1200
            + +   F   K  L+LSY  ++      +  G+    + V     R+ E++ ++EK RPM++K++YQ DKLL L+S      +    GDD        +DPLSFRP PE M  +GE+                            +A A   EG           S+ G+Y+ PRL+SVP+  +          ++ ER L+K+ +++R+ E ++T++ +FGE+PE     G A   G      +RL + D E+  +EE+  VRL  +RK KKAR + M ++A  L  I+D+G+          A+GF +  +  +DDV
Sbjct:   11 KKDSLDFLDVKNGLVLSYLIDLSRLTQLQLRGKTKEDSQVEACLKRLNEMKALLEKTRPMEKKMRYQLDKLLSLSSTSSTFASAGAGGDDATLSVNNNNDPLSFRPNPEKMITKGEDDXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKAALSEGKKKNKKDVDNHSKVGIYKAPRLASVPFATEEKEE------QKKERILKKQKERMRKSEFLQTIQSQFGEKPEEDDMGGGA-TIGKQREAARRLTERDAEKTRYEEESFVRLATSRKEKKARNRIMREEASNLNAISDIGNI---------ANGFSMAFDNEDDDV 313          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12742.5522.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J951_9PHAE4.530e-14363.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D9DG17_9STRA1.800e-3237.05Sas10 domain-containing protein n=2 Tax=Monodopsid... [more]
A0A835ZC79_9STRA1.840e-3131.77Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YU38_9STRA5.780e-3032.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CGQ1_9STRA2.250e-2432.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A5D6XJV1_9STRA6.170e-2432.08Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A2K5F1C8_AOTNA1.940e-2331.25Neuroguidin n=2 Tax=Eutheria TaxID=9347 RepID=A0A2... [more]
A0A8J6CFT6_DIALT2.060e-2334.49Sas10 domain-containing protein n=1 Tax=Diacronema... [more]
UPI0018858E462.140e-2334.19neuroguidin-like isoform X1 n=4 Tax=Pollicipes pol... [more]
A0A7S2R5P9_9STRA2.180e-2329.47Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12742contigM-pyrifera_M_contig12742:7241..8554 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score436.8
Seed ortholog evalue1.2e-119
Seed eggNOG ortholog2880.D7FH58
Preferred nameNGDN
KEGG koko:K08873,ko:K14765,ko:K14767
KEGG Pathwayko03015,map03015
Hectar predicted targeting categoryother localisation
GOsGO:0000447,GO:0000460,GO:0000462,GO:0000466,GO:0000469,GO:0000478,GO:0000479,GO:0000480,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005732,GO:0005737,GO:0005739,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030490,GO:0030532,GO:0030684,GO:0031974,GO:0031981,GO:0032040,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0120114,GO:1901360,GO:1901363,GO:1990904
EggNOG free text desc.maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
EggNOG OGsKOG3117@1,KOG3117@2759
Ec32 ortholog descriptionSas10/Utp3/C1D
Ec32 orthologEc-13_000850.1
EC2.7.11.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko03009,ko03019
Exons1
Model size1314
Cds size1314
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815788.4419792-CDS-M-pyrifera_M_contig12742:7240..85541622815788.4419792-CDS-M-pyrifera_M_contig12742:7240..8554Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12742 7241..8554 -
1692277569.969508-CDS-M-pyrifera_M_contig12742:7240..85541692277569.969508-CDS-M-pyrifera_M_contig12742:7240..8554Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12742 7241..8554 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12742.5522.1prot_M-pyrifera_M_contig12742.5522.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig12742 7241..8554 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig12742.5522.1

>prot_M-pyrifera_M_contig12742.5522.1 ID=prot_M-pyrifera_M_contig12742.5522.1|Name=mRNA_M-pyrifera_M_contig12742.5522.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=438bp
SNPSASKKGIKSPGKRHKLAKVMGGSAPDNRNSSSSRVVGGGKSKRLRPK
RGDEAMDVDDDLSKVTAAAAVIEEEKPKLREVLEELRARSKGLAEKVATL
AARAAGEVAEDPGPRDEGASFFAAKQTLLLSYCREVCSYAAAKATGQAIH
GTGVAGRMVELRTVMEKLRPMDRKLKYQTDKLLRLASAGPKSVAFSEAGD
DEDDPLSFRPRPEAMALRGEEPDGTGEISRNGDSERSGSALAQTREGSES
GLYRVPRLSSVPYDEDGVAVPGGGGARRNERRLEKRLDKLRRGEVMETLR
EEFGEQPETVKAPGNAGAAGVSENKMKRLLDEDQERLDFEEDHMVRLTVT
RKAKKARAQMEKDAGRLETIADVGSAADFVRAAKDADGFGVEMEGGEDDV
FSGGRGRRGRGKGKGALGRAMGAVGGSLPRGGKRRGK*
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mRNA from alignment at M-pyrifera_M_contig12742:7241..8554-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig12742.5522.1 ID=mRNA_M-pyrifera_M_contig12742.5522.1|Name=mRNA_M-pyrifera_M_contig12742.5522.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1314bp|location=Sequence derived from alignment at M-pyrifera_M_contig12742:7241..8554- (Macrocystis pyrifera P11B4 male)
TCGAACCCGAGCGCGAGCAAGAAGGGCATCAAGTCTCCTGGCAAAAGACA CAAGCTTGCCAAGGTAATGGGCGGGTCTGCCCCTGACAATCGCAACAGCA GCAGCAGCAGAGTGGTGGGTGGGGGGAAGAGCAAACGTTTGCGCCCCAAG CGTGGCGACGAGGCCATGGATGTGGACGATGATCTGAGCAAGGTCACGGC GGCGGCGGCGGTGATTGAGGAGGAGAAACCTAAGCTGCGCGAGGTTTTGG AAGAGCTGAGGGCCCGCTCCAAGGGTTTGGCGGAGAAGGTTGCAACGCTT GCTGCACGGGCCGCCGGGGAGGTCGCGGAGGATCCAGGTCCGAGGGACGA GGGCGCCTCATTCTTTGCGGCGAAGCAGACTTTGCTCCTCAGTTACTGCC GGGAGGTTTGTTCGTACGCTGCAGCTAAGGCGACGGGACAGGCCATACAT GGGACAGGAGTGGCCGGGAGGATGGTAGAGCTACGGACGGTGATGGAGAA GCTTCGGCCGATGGACCGGAAGCTTAAATACCAGACGGACAAGCTGCTGC GGCTCGCCTCGGCTGGGCCGAAGAGTGTGGCGTTTTCTGAGGCAGGGGAC GACGAAGATGATCCCCTGAGTTTCAGGCCTCGCCCGGAGGCGATGGCTCT GCGGGGGGAAGAACCCGACGGGACAGGCGAGATTTCGAGAAACGGGGACT CAGAAAGGAGCGGCTCGGCCTTGGCTCAAACCAGGGAGGGGTCCGAGTCG GGCCTCTACCGGGTGCCACGACTCTCGTCCGTGCCCTACGACGAAGATGG CGTTGCTGTGCCCGGGGGCGGGGGGGCGCGTAGAAACGAGAGACGGCTGG AAAAGAGGCTGGACAAGTTGCGCCGTGGGGAGGTGATGGAGACCCTTCGA GAGGAATTCGGTGAACAGCCCGAGACTGTCAAGGCTCCTGGAAATGCGGG CGCCGCGGGAGTTTCGGAGAACAAGATGAAACGTCTTCTCGATGAGGATC AAGAAAGGCTGGACTTTGAGGAGGATCACATGGTTCGCTTGACAGTTACA CGGAAGGCCAAGAAGGCAAGGGCGCAGATGGAGAAGGACGCGGGAAGACT GGAGACTATCGCCGATGTGGGGAGCGCCGCCGACTTCGTCAGAGCCGCCA AGGATGCCGACGGGTTTGGAGTGGAGATGGAAGGCGGTGAAGATGACGTG TTCAGCGGAGGGAGAGGACGCAGAGGCAGGGGAAAGGGCAAGGGGGCCTT GGGGCGCGCGATGGGCGCAGTCGGAGGAAGCTTGCCTAGAGGGGGGAAGA GGAGGGGCAAATAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig12742:7241..8554-

>mRNA_M-pyrifera_M_contig12742.5522.1 ID=mRNA_M-pyrifera_M_contig12742.5522.1|Name=mRNA_M-pyrifera_M_contig12742.5522.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2628bp|location=Sequence derived from alignment at M-pyrifera_M_contig12742:7241..8554- (Macrocystis pyrifera P11B4 male)
TCGAACCCGAGCGCGAGCAAGAAGGGCATCAAGTCTCCTGGCAAAAGACA
CAAGCTTGCCAAGGTAATGGGCGGGTCTGCCCCTGACAATCGCAACAGCA
GCAGCAGCAGAGTGGTGGGTGGGGGGAAGAGCAAACGTTTGCGCCCCAAG
CGTGGCGACGAGGCCATGGATGTGGACGATGATCTGAGCAAGGTCACGGC
GGCGGCGGCGGTGATTGAGGAGGAGAAACCTAAGCTGCGCGAGGTTTTGG
AAGAGCTGAGGGCCCGCTCCAAGGGTTTGGCGGAGAAGGTTGCAACGCTT
GCTGCACGGGCCGCCGGGGAGGTCGCGGAGGATCCAGGTCCGAGGGACGA
GGGCGCCTCATTCTTTGCGGCGAAGCAGACTTTGCTCCTCAGTTACTGCC
GGGAGGTTTGTTCGTACGCTGCAGCTAAGGCGACGGGACAGGCCATACAT
GGGACAGGAGTGGCCGGGAGGATGGTAGAGCTACGGACGGTGATGGAGAA
GCTTCGGCCGATGGACCGGAAGCTTAAATACCAGACGGACAAGCTGCTGC
GGCTCGCCTCGGCTGGGCCGAAGAGTGTGGCGTTTTCTGAGGCAGGGGAC
GACGAAGATGATCCCCTGAGTTTCAGGCCTCGCCCGGAGGCGATGGCTCT
GCGGGGGGAAGAACCCGACGGGACAGGCGAGATTTCGAGAAACGGGGACT
CAGAAAGGAGCGGCTCGGCCTTGGCTCAAACCAGGGAGGGGTCCGAGTCG
GGCCTCTACCGGGTGCCACGACTCTCGTCCGTGCCCTACGACGAAGATGG
CGTTGCTGTGCCCGGGGGCGGGGGGGCGCGTAGAAACGAGAGACGGCTGG
AAAAGAGGCTGGACAAGTTGCGCCGTGGGGAGGTGATGGAGACCCTTCGA
GAGGAATTCGGTGAACAGCCCGAGACTGTCAAGGCTCCTGGAAATGCGGG
CGCCGCGGGAGTTTCGGAGAACAAGATGAAACGTCTTCTCGATGAGGATC
AAGAAAGGCTGGACTTTGAGGAGGATCACATGGTTCGCTTGACAGTTACA
CGGAAGGCCAAGAAGGCAAGGGCGCAGATGGAGAAGGACGCGGGAAGACT
GGAGACTATCGCCGATGTGGGGAGCGCCGCCGACTTCGTCAGAGCCGCCA
AGGATGCCGACGGGTTTGGAGTGGAGATGGAAGGCGGTGAAGATGACGTG
TTCAGCGGAGGGAGAGGACGCAGAGGCAGGGGAAAGGGCAAGGGGGCCTT
GGGGCGCGCGATGGGCGCAGTCGGAGGAAGCTTGCCTAGAGGGGGGAAGA
GGAGGGGCAAATAATCGAACCCGAGCGCGAGCAAGAAGGGCATCAAGTCT
CCTGGCAAAAGACACAAGCTTGCCAAGGTAATGGGCGGGTCTGCCCCTGA
CAATCGCAACAGCAGCAGCAGCAGAGTGGTGGGTGGGGGGAAGAGCAAAC
GTTTGCGCCCCAAGCGTGGCGACGAGGCCATGGATGTGGACGATGATCTG
AGCAAGGTCACGGCGGCGGCGGCGGTGATTGAGGAGGAGAAACCTAAGCT
GCGCGAGGTTTTGGAAGAGCTGAGGGCCCGCTCCAAGGGTTTGGCGGAGA
AGGTTGCAACGCTTGCTGCACGGGCCGCCGGGGAGGTCGCGGAGGATCCA
GGTCCGAGGGACGAGGGCGCCTCATTCTTTGCGGCGAAGCAGACTTTGCT
CCTCAGTTACTGCCGGGAGGTTTGTTCGTACGCTGCAGCTAAGGCGACGG
GACAGGCCATACATGGGACAGGAGTGGCCGGGAGGATGGTAGAGCTACGG
ACGGTGATGGAGAAGCTTCGGCCGATGGACCGGAAGCTTAAATACCAGAC
GGACAAGCTGCTGCGGCTCGCCTCGGCTGGGCCGAAGAGTGTGGCGTTTT
CTGAGGCAGGGGACGACGAAGATGATCCCCTGAGTTTCAGGCCTCGCCCG
GAGGCGATGGCTCTGCGGGGGGAAGAACCCGACGGGACAGGCGAGATTTC
GAGAAACGGGGACTCAGAAAGGAGCGGCTCGGCCTTGGCTCAAACCAGGG
AGGGGTCCGAGTCGGGCCTCTACCGGGTGCCACGACTCTCGTCCGTGCCC
TACGACGAAGATGGCGTTGCTGTGCCCGGGGGCGGGGGGGCGCGTAGAAA
CGAGAGACGGCTGGAAAAGAGGCTGGACAAGTTGCGCCGTGGGGAGGTGA
TGGAGACCCTTCGAGAGGAATTCGGTGAACAGCCCGAGACTGTCAAGGCT
CCTGGAAATGCGGGCGCCGCGGGAGTTTCGGAGAACAAGATGAAACGTCT
TCTCGATGAGGATCAAGAAAGGCTGGACTTTGAGGAGGATCACATGGTTC
GCTTGACAGTTACACGGAAGGCCAAGAAGGCAAGGGCGCAGATGGAGAAG
GACGCGGGAAGACTGGAGACTATCGCCGATGTGGGGAGCGCCGCCGACTT
CGTCAGAGCCGCCAAGGATGCCGACGGGTTTGGAGTGGAGATGGAAGGCG
GTGAAGATGACGTGTTCAGCGGAGGGAGAGGACGCAGAGGCAGGGGAAAG
GGCAAGGGGGCCTTGGGGCGCGCGATGGGCGCAGTCGGAGGAAGCTTGCC
TAGAGGGGGGAAGAGGAGGGGCAAATAA
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