mRNA_M-pyrifera_M_contig127352.5509.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig127352.5509.1
Unique NamemRNA_M-pyrifera_M_contig127352.5509.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig127352.5509.1 vs. uniprot
Match: A0A517WEZ1_9PLAN (Choline-sulfatase n=6 Tax=Gimesia TaxID=1649453 RepID=A0A517WEZ1_9PLAN)

HSP 1 Score: 302 bits (773), Expect = 5.130e-99
Identity = 148/150 (98.67%), Postives = 149/150 (99.33%), Query Frame = 1
Query:    1 KHTNFENDTRVPLIIRAPGMQAQGKTSEALVEFVDIYPTLCDLAGLPIPTHLEGTSFKPLLSNPQRPWKPAAFSQYPRGRVMGYSMKTDRYRYTEWQDRKSGKVVDRELYDHRQDGAENENIAGQPDQKQVVKQLSAQLKKNWKGAVVPD 450
            KHTNFENDTRVPLIIRAPGMQAQGKTSEALVEFVDIYPTLCDLAGLP+P HLEGTSFKPLLSNPQRPWKPAAFSQYPRGRVMGYSMKTDRYRYTEWQDRKSGKVVDRELYDHRQDGAENENIAGQPDQKQVVKQLSAQLKKNWKGAVVPD
Sbjct:  344 KHTNFENDTRVPLIIRAPGMQAQGKTSEALVEFVDIYPTLCDLAGLPLPAHLEGTSFKPLLSNPQRPWKPAAFSQYPRGRVMGYSMKTDRYRYTEWQDRKSGKVVDRELYDHRQDGAENENIAGQPDQKQVVKQLSAQLKKNWKGAVVPD 493          
BLAST of mRNA_M-pyrifera_M_contig127352.5509.1 vs. uniprot
Match: A0A517Q912_9PLAN (Choline-sulfatase n=5 Tax=Gimesia TaxID=1649453 RepID=A0A517Q912_9PLAN)

HSP 1 Score: 291 bits (745), Expect = 8.540e-95
Identity = 142/150 (94.67%), Postives = 147/150 (98.00%), Query Frame = 1
Query:    1 KHTNFENDTRVPLIIRAPGMQAQGKTSEALVEFVDIYPTLCDLAGLPIPTHLEGTSFKPLLSNPQRPWKPAAFSQYPRGRVMGYSMKTDRYRYTEWQDRKSGKVVDRELYDHRQDGAENENIAGQPDQKQVVKQLSAQLKKNWKGAVVPD 450
            KHTNFENDTRVPLIIRAPGMQAQGKTSEALVEFVDIYPTLCDLAGLP+P HLEGTSFKPLL+NPQRPWKPAAFSQYPRGRVMGYSMKTDRYRYTEWQDRKSGKV+ RELYDH+QDGAENENIAG+PDQK VVKQLSAQLKKNWKGAVVPD
Sbjct:  344 KHTNFENDTRVPLIIRAPGMQAQGKTSEALVEFVDIYPTLCDLAGLPLPAHLEGTSFKPLLTNPQRPWKPAAFSQYPRGRVMGYSMKTDRYRYTEWQDRKSGKVMARELYDHQQDGAENENIAGKPDQKPVVKQLSAQLKKNWKGAVVPD 493          
BLAST of mRNA_M-pyrifera_M_contig127352.5509.1 vs. uniprot
Match: A0A517WZE9_9PLAN (Arylsulfatase n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WZE9_9PLAN)

HSP 1 Score: 253 bits (647), Expect = 4.430e-80
Identity = 123/150 (82.00%), Postives = 134/150 (89.33%), Query Frame = 1
Query:    1 KHTNFENDTRVPLIIRAPGMQAQGKTSEALVEFVDIYPTLCDLAGLPIPTHLEGTSFKPLLSNPQRPWKPAAFSQYPRGRVMGYSMKTDRYRYTEWQDRKSGKVVDRELYDHRQDGAENENIAGQPDQKQVVKQLSAQLKKNWKGAVVPD 450
            KHTNFE DTRVPLIIRAP +QA GKT+ ALVEFVDIYPTLC+LA +P+P HLEGTSFKPLL NP RPWKPAAFSQYPRG +MGYSMKTDRYRYTEW++RKSGK+V RELYDH+ D AEN+NIA QPDQK VV QLS QLKKNWKGAVVPD
Sbjct:  342 KHTNFELDTRVPLIIRAPQIQASGKTTRALVEFVDIYPTLCELARIPLPDHLEGTSFKPLLENPNRPWKPAAFSQYPRGSMMGYSMKTDRYRYTEWRERKSGKIVGRELYDHQHDSAENKNIANQPDQKTVVGQLSRQLKKNWKGAVVPD 491          
BLAST of mRNA_M-pyrifera_M_contig127352.5509.1 vs. uniprot
Match: A0A5C5UXM2_9BACT (Choline-sulfatase n=1 Tax=Blastopirellula retiformator TaxID=2527970 RepID=A0A5C5UXM2_9BACT)

HSP 1 Score: 199 bits (506), Expect = 4.880e-59
Identity = 97/146 (66.44%), Postives = 114/146 (78.08%), Query Frame = 1
Query:    1 KHTNFENDTRVPLIIRAPGMQAQGKTSEALVEFVDIYPTLCDLAGLPIPTHLEGTSFKPLLSNPQRPWKPAAFSQYPRGRVMGYSMKTDRYRYTEWQDRKSGKVVDRELYDHRQDGAENENIAGQPDQKQVVKQLSAQLKKNWKGA 438
            KHTNFEND   PLIIRAPG +A GK S+ALVEFVDIYPTLCDLAGL  P HLEG+S  PLL  P   WKPAAFSQYPRG VMGY+MKTDRYR+T W+++K+G+V++ ELYDH+ D AENEN+AG+    ++V QL  QL   WK A
Sbjct:  342 KHTNFENDANAPLIIRAPGQKAPGKPSDALVEFVDIYPTLCDLAGLDKPQHLEGSSAAPLLDKPGAKWKPAAFSQYPRGAVMGYTMKTDRYRFTAWKNKKTGEVLETELYDHQVDPAENENVAGEAKNAELVAQLQKQLDAGWKAA 487          
BLAST of mRNA_M-pyrifera_M_contig127352.5509.1 vs. uniprot
Match: A0A7C3F177_9BACT (DUF4976 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C3F177_9BACT)

HSP 1 Score: 196 bits (499), Expect = 4.690e-58
Identity = 90/146 (61.64%), Postives = 114/146 (78.08%), Query Frame = 1
Query:    1 KHTNFENDTRVPLIIRAPGMQAQGKTSEALVEFVDIYPTLCDLAGLPIPTHLEGTSFKPLLSNPQRPWKPAAFSQYPRGRVMGYSMKTDRYRYTEWQDRKSGKVVDRELYDHRQDGAENENIAGQPDQKQVVKQLSAQLKKNWKGA 438
            KHTNFE DT  PL++R PG +  G+ ++ALVEFVDIYPTLC+ AGLP+P HLEGTS  PL  +P+RPWK A FSQYPRGR MGY+M+TDR+RYTEW+DR +G+   RELYDH+ D  EN N+A +P+ K  V++LSA+LK  W+ A
Sbjct:  335 KHTNFELDTHAPLVLRVPGQKNAGRKTQALVEFVDIYPTLCEAAGLPVPGHLEGTSLMPLTKDPERPWKAAVFSQYPRGRTMGYTMRTDRWRYTEWRDRGTGEATARELYDHQADPGENVNLAARPEHKATVEELSAKLKAGWRAA 480          
BLAST of mRNA_M-pyrifera_M_contig127352.5509.1 vs. uniprot
Match: A0A3D3V000_9BACT (Iduronate sulfatase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A3D3V000_9BACT)

HSP 1 Score: 196 bits (497), Expect = 9.690e-58
Identity = 90/146 (61.64%), Postives = 113/146 (77.40%), Query Frame = 1
Query:    1 KHTNFENDTRVPLIIRAPGMQAQGKTSEALVEFVDIYPTLCDLAGLPIPTHLEGTSFKPLLSNPQRPWKPAAFSQYPRGRVMGYSMKTDRYRYTEWQDRKSGKVVDRELYDHRQDGAENENIAGQPDQKQVVKQLSAQLKKNWKGA 438
            KHTNFE DT VP+I+  PGM+  G+ + AL E+VDIYPTLC    L IP+HLEG S  PL+ NPQRPWK AAFSQYPRGR+MGY+M+T+R+RYTEWQDRK+GK++ RELYDH +D  EN N A QP+ +  +K+L+  LKK W+ A
Sbjct:  337 KHTNFELDTHVPMILSVPGMKTTGRRTRALTEYVDIYPTLCQACDLKIPSHLEGRSMMPLVDNPQRPWKKAAFSQYPRGRIMGYTMRTERFRYTEWQDRKTGKLMARELYDHEKDPQENVNAAAQPEHEHDIKRLAGMLKKGWRAA 482          
BLAST of mRNA_M-pyrifera_M_contig127352.5509.1 vs. uniprot
Match: A0A2S8F3C5_9BACT (Iduronate sulfatase n=2 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8F3C5_9BACT)

HSP 1 Score: 196 bits (497), Expect = 1.060e-57
Identity = 98/150 (65.33%), Postives = 117/150 (78.00%), Query Frame = 1
Query:    1 KHTNFENDTRVPLIIRAPGMQAQGKTSEALVEFVDIYPTLCDLAGLPIPTHLEGTSFKPLLSNPQRPWKPAAFSQYPRGR-VMGYSMKTDRYRYTEWQDRKSGKVVDRELYDHRQDGAENENIAGQPDQKQVVKQLSAQLKKNWKGAVVP 447
            KHTNFEND   PLIIRAPG ++ G  ++ALVEFVDIYPTLC+LA LP+P HLEGTS  PLL  P   WKPAAFSQYPRGR +MGY+MKTDRYR+T W+++KSG+VV  ELYDH+ D AEN+N+AG  + K++V QL  QL   WK AV P
Sbjct:  341 KHTNFENDANAPLIIRAPGQKSPGAKTDALVEFVDIYPTLCELADLPLPEHLEGTSAAPLLDTPDAKWKPAAFSQYPRGRDIMGYTMKTDRYRFTAWKNKKSGEVVATELYDHQVDPAENDNVAGAAENKELVAQLQQQLDAGWK-AVKP 489          
BLAST of mRNA_M-pyrifera_M_contig127352.5509.1 vs. uniprot
Match: A0A5Q4GF38_9PLAN (DUF4976 domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A5Q4GF38_9PLAN)

HSP 1 Score: 192 bits (488), Expect = 1.840e-56
Identity = 94/143 (65.73%), Postives = 109/143 (76.22%), Query Frame = 1
Query:    1 KHTNFENDTRVPLIIRAPGMQAQGKTSEALVEFVDIYPTLCDLAGLPIPTHLEGTSFKPLLSNPQRPWKPAAFSQYPRGRVMGYSMKTDRYRYTEWQDRKSGKVVDRELYDHRQDGAENENIAGQPDQKQVVKQLSAQLKKNW 429
            KHTNFENDT  PLIIRAPG +A G  + ALVEFVDIYPTLCDLAGL  P HLEGTS  PL+ +P +PWK AAFSQYPRG VMGYSM+TDRYR+T W+ RK+ ++   ELYDH  D AE ENIAG  DQ ++V+ L  QL + W
Sbjct:  331 KHTNFENDTHAPLIIRAPGQKAAGSKTRALVEFVDIYPTLCDLAGLDKPDHLEGTSAAPLMDDPDQPWKAAAFSQYPRGPVMGYSMRTDRYRFTVWKHRKTRQIEATELYDHHSDPAETENIAGDADQAELVQSLLTQLNEGW 473          
BLAST of mRNA_M-pyrifera_M_contig127352.5509.1 vs. uniprot
Match: A0A7Y2U6Q9_9BACT (Sulfatase (Fragment) n=1 Tax=Akkermansiaceae bacterium TaxID=2562705 RepID=A0A7Y2U6Q9_9BACT)

HSP 1 Score: 192 bits (487), Expect = 2.820e-56
Identity = 95/143 (66.43%), Postives = 115/143 (80.42%), Query Frame = 1
Query:    1 KHTNFENDTRVPLIIRAPGMQAQGKTSEALVEFVDIYPTLCDLAGLPIPTHLEGTSFKPLLSNPQRPWKPAAFSQYPRGRV---MGYSMKTDRYRYTEWQDRKSGKVVDRELYDHRQDGAENENIAGQPDQKQVVKQLSAQLK 420
            KHTNFE DTRVPLI+RAPGM+A GK + AL E VD+YP+L DL GL  P HL+GTSF PLL  P++ WK AAFSQYPRGR    MGYSM+TDRYRYTEW++ +SGKV+ RELYDH+ D AEN N+AGQ  Q+Q+VK+LS +L+
Sbjct:  340 KHTNFELDTRVPLIVRAPGMKAAGKKTRALTELVDLYPSLVDLCGLDAPKHLQGTSFAPLLDQPRQTWKTAAFSQYPRGRARSTMGYSMRTDRYRYTEWRNNQSGKVIARELYDHQTDPAENNNLAGQAKQQQLVKKLSTKLR 482          
BLAST of mRNA_M-pyrifera_M_contig127352.5509.1 vs. uniprot
Match: A0A7C4MUB9_9BACT (DUF4976 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C4MUB9_9BACT)

HSP 1 Score: 191 bits (485), Expect = 1.130e-55
Identity = 94/146 (64.38%), Postives = 113/146 (77.40%), Query Frame = 1
Query:    1 KHTNFENDTRVPLIIRAPGMQAQGKTSEALVEFVDIYPTLCDLAGLPIPTHLEGTSFKPLLSNPQRPWKPAAFSQYPRGRVMGYSMKTDRYRYTEWQDRKSGKVVDRELYDHRQDGAENENIAGQPDQKQVVKQLSAQLKKNWKGA 438
            KHTNFE  TR PLII APG +A G+ S ALVEFVDIYPTL +L GLP+P  LEGTS  PLL  P RPWK AAFSQYPR   MGY+M+TDRYRYTEW+ RK G ++  ELYDH++D  EN N+AG+P+ K+ V++L+AQLK  W+GA
Sbjct:  365 KHTNFEKATRSPLIISAPGQKAAGRRSSALVEFVDIYPTLVELCGLPMPEGLEGTSAVPLLDEPDRPWKTAAFSQYPRSGAMGYTMRTDRYRYTEWRPRKPGPLLGVELYDHQEDPEENVNLAGRPEWKETVEKLAAQLKAGWQGA 510          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127352.5509.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517WEZ1_9PLAN5.130e-9998.67Choline-sulfatase n=6 Tax=Gimesia TaxID=1649453 Re... [more]
A0A517Q912_9PLAN8.540e-9594.67Choline-sulfatase n=5 Tax=Gimesia TaxID=1649453 Re... [more]
A0A517WZE9_9PLAN4.430e-8082.00Arylsulfatase n=2 Tax=Gimesia aquarii TaxID=252796... [more]
A0A5C5UXM2_9BACT4.880e-5966.44Choline-sulfatase n=1 Tax=Blastopirellula retiform... [more]
A0A7C3F177_9BACT4.690e-5861.64DUF4976 domain-containing protein n=1 Tax=Planctom... [more]
A0A3D3V000_9BACT9.690e-5861.64Iduronate sulfatase n=1 Tax=Phycisphaerales bacter... [more]
A0A2S8F3C5_9BACT1.060e-5765.33Iduronate sulfatase n=2 Tax=Blastopirellula marina... [more]
A0A5Q4GF38_9PLAN1.840e-5665.73DUF4976 domain-containing protein n=1 Tax=Planctom... [more]
A0A7Y2U6Q9_9BACT2.820e-5666.43Sulfatase (Fragment) n=1 Tax=Akkermansiaceae bacte... [more]
A0A7C4MUB9_9BACT1.130e-5564.38DUF4976 domain-containing protein n=1 Tax=Planctom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig127352contigM-pyrifera_M_contig127352:53..505 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score193.7
Seed ortholog evalue6.1e-47
Seed eggNOG ortholog314230.DSM3645_06014
Hectar predicted targeting categoryother localisation
EggNOG free text desc.COG3119 Arylsulfatase A and related enzymes
EggNOG OGs2J24M@203682,COG3119@1,COG3119@2
COG Functional cat.P
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size453
Cds size453
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815787.6122155-CDS-M-pyrifera_M_contig127352:52..5051622815787.6122155-CDS-M-pyrifera_M_contig127352:52..505Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig127352 53..505 -
1692277569.5010514-CDS-M-pyrifera_M_contig127352:52..5051692277569.5010514-CDS-M-pyrifera_M_contig127352:52..505Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig127352 53..505 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig127352.5509.1prot_M-pyrifera_M_contig127352.5509.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig127352 53..505 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig127352.5509.1

>prot_M-pyrifera_M_contig127352.5509.1 ID=prot_M-pyrifera_M_contig127352.5509.1|Name=mRNA_M-pyrifera_M_contig127352.5509.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=151bp
KHTNFENDTRVPLIIRAPGMQAQGKTSEALVEFVDIYPTLCDLAGLPIPT
HLEGTSFKPLLSNPQRPWKPAAFSQYPRGRVMGYSMKTDRYRYTEWQDRK
SGKVVDRELYDHRQDGAENENIAGQPDQKQVVKQLSAQLKKNWKGAVVPD
*
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mRNA from alignment at M-pyrifera_M_contig127352:53..505-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig127352.5509.1 ID=mRNA_M-pyrifera_M_contig127352.5509.1|Name=mRNA_M-pyrifera_M_contig127352.5509.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=453bp|location=Sequence derived from alignment at M-pyrifera_M_contig127352:53..505- (Macrocystis pyrifera P11B4 male)
AAACATACGAACTTTGAAAACGACACCCGCGTGCCGCTCATCATTCGGGC ACCGGGAATGCAGGCGCAGGGAAAAACCAGTGAGGCCCTGGTGGAGTTTG TGGATATCTACCCGACACTCTGCGATTTAGCAGGACTCCCCATCCCCACG CACCTGGAAGGGACCAGCTTCAAACCGTTGTTAAGCAACCCGCAGCGTCC CTGGAAGCCGGCCGCTTTCAGCCAGTATCCACGGGGACGCGTGATGGGTT ATTCGATGAAAACGGATCGCTACCGCTACACCGAATGGCAGGACCGCAAG TCAGGCAAGGTCGTCGACCGCGAATTGTACGACCATCGGCAGGATGGAGC CGAGAACGAAAACATCGCCGGCCAGCCGGACCAAAAGCAGGTGGTGAAAC AACTATCGGCGCAGCTGAAAAAGAACTGGAAAGGGGCGGTGGTGCCTGAT TGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig127352:53..505-

>mRNA_M-pyrifera_M_contig127352.5509.1 ID=mRNA_M-pyrifera_M_contig127352.5509.1|Name=mRNA_M-pyrifera_M_contig127352.5509.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=906bp|location=Sequence derived from alignment at M-pyrifera_M_contig127352:53..505- (Macrocystis pyrifera P11B4 male)
AAACATACGAACTTTGAAAACGACACCCGCGTGCCGCTCATCATTCGGGC
ACCGGGAATGCAGGCGCAGGGAAAAACCAGTGAGGCCCTGGTGGAGTTTG
TGGATATCTACCCGACACTCTGCGATTTAGCAGGACTCCCCATCCCCACG
CACCTGGAAGGGACCAGCTTCAAACCGTTGTTAAGCAACCCGCAGCGTCC
CTGGAAGCCGGCCGCTTTCAGCCAGTATCCACGGGGACGCGTGATGGGTT
ATTCGATGAAAACGGATCGCTACCGCTACACCGAATGGCAGGACCGCAAG
TCAGGCAAGGTCGTCGACCGCGAATTGTACGACCATCGGCAGGATGGAGC
CGAGAACGAAAACATCGCCGGCCAGCCGGACCAAAAGCAGGTGGTGAAAC
AACTATCGGCGCAGCTGAAAAAGAACTGGAAAGGGGCGGTGGTGCCTGAT
TGAAAACATACGAACTTTGAAAACGACACCCGCGTGCCGCTCATCATTCG
GGCACCGGGAATGCAGGCGCAGGGAAAAACCAGTGAGGCCCTGGTGGAGT
TTGTGGATATCTACCCGACACTCTGCGATTTAGCAGGACTCCCCATCCCC
ACGCACCTGGAAGGGACCAGCTTCAAACCGTTGTTAAGCAACCCGCAGCG
TCCCTGGAAGCCGGCCGCTTTCAGCCAGTATCCACGGGGACGCGTGATGG
GTTATTCGATGAAAACGGATCGCTACCGCTACACCGAATGGCAGGACCGC
AAGTCAGGCAAGGTCGTCGACCGCGAATTGTACGACCATCGGCAGGATGG
AGCCGAGAACGAAAACATCGCCGGCCAGCCGGACCAAAAGCAGGTGGTGA
AACAACTATCGGCGCAGCTGAAAAAGAACTGGAAAGGGGCGGTGGTGCCT
GATTGA
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