mRNA_M-pyrifera_M_contig127325.5503.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig127325.5503.1 vs. uniprot
Match: A0A2G9H886_9LAMI (Serine/threonine protein kinase n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9H886_9LAMI) HSP 1 Score: 68.2 bits (165), Expect = 1.010e-10 Identity = 42/103 (40.78%), Postives = 59/103 (57.28%), Query Frame = 1
Query: 25 CGWFGVSCNGDGVVTSLALPSNNLVGSIPPSLASLRSLTSLNVSDNRGLSGVLLYPFSWASFPAMEVLDFSNTAYLVSIVDI-LLPPKLKILRLSGSPVHGEV 330
C W GV C+G G +T+L LPS L+GSIPPS+ +L S++ L++S N LSG L F +AS ++V+D S I LP +K LS + HG +
Sbjct: 80 CSWEGVGCDGSGKLTNLWLPSRGLIGSIPPSIVNLSSISQLSLSHN-WLSGSLPDGF-FASLNQLQVVDLSRNRLAGEIPPSDKLPATVKTFNLSSNHFHGTI 180
BLAST of mRNA_M-pyrifera_M_contig127325.5503.1 vs. uniprot
Match: A0A314XJU8_PRUYE (Receptor-like protein 2 n=1 Tax=Prunus yedoensis var. nudiflora TaxID=2094558 RepID=A0A314XJU8_PRUYE) HSP 1 Score: 67.8 bits (164), Expect = 1.220e-10 Identity = 48/133 (36.09%), Postives = 66/133 (49.62%), Query Frame = 1
Query: 25 CGWFGVSCNGDGVVTSLALPSNNLVGSIPPSLASLRSLTSLNVSDNRGLSGVLLYPFS-----WASFPAMEVLDFSNTAYLVSIVDILLPPKLKILRLSGSPVHGEVP----RLPDSLVDFRVAQTQVTGAVP 396
C W G++CN DG VT L LPS L G I PSL +L LT LN+ N L P S + +E+LD SN L + + LP ++I+ LS + HG VP + +L F V+ +G +P
Sbjct: 21 CYWEGITCNQDGWVTRLHLPSKGLKGGIHPSLGNLTHLTHLNLCHNS-----LYCPTSNEIEFFLPLNHLEILDLSNNL-LSGELPLSLPSNIQIVDLSTNHFHGVVPSSFFQQARNLTSFNVSNNTFSGPIP 147
BLAST of mRNA_M-pyrifera_M_contig127325.5503.1 vs. uniprot
Match: M5W258_PRUPE (Uncharacterized protein (Fragment) n=1 Tax=Prunus persica TaxID=3760 RepID=M5W258_PRUPE) HSP 1 Score: 67.0 bits (162), Expect = 2.470e-10 Identity = 48/133 (36.09%), Postives = 66/133 (49.62%), Query Frame = 1
Query: 25 CGWFGVSCNGDGVVTSLALPSNNLVGSIPPSLASLRSLTSLNVSDNRGLSGVLLYPFS-----WASFPAMEVLDFSNTAYLVSIVDILLPPKLKILRLSGSPVHGEVP----RLPDSLVDFRVAQTQVTGAVP 396
C W G++CN DG VT L LPS L G I PSL +L LT LN+S N L P S + +E+LD S L + + LP ++I+ LS + HG VP + +L F V+ +G +P
Sbjct: 5 CYWEGITCNQDGWVTRLHLPSKGLKGGIHPSLGNLTHLTHLNLSHNS-----LYCPTSKEIEFFLPLNRLEILDLSYNL-LSGELPLSLPSNIQIVDLSTNHFHGVVPSSFFQQARNLTSFNVSNNTFSGPIP 131
BLAST of mRNA_M-pyrifera_M_contig127325.5503.1 vs. uniprot
Match: A0A6P5SE81_PRUAV (receptor-like protein 2 n=6 Tax=Prunus TaxID=3754 RepID=A0A6P5SE81_PRUAV) HSP 1 Score: 65.9 bits (159), Expect = 6.280e-10 Identity = 47/133 (35.34%), Postives = 66/133 (49.62%), Query Frame = 1
Query: 25 CGWFGVSCNGDGVVTSLALPSNNLVGSIPPSLASLRSLTSLNVSDNRGLSGVLLYPFS-----WASFPAMEVLDFSNTAYLVSIVDILLPPKLKILRLSGSPVHGEVP----RLPDSLVDFRVAQTQVTGAVP 396
C W G++CN DG VT L LPS L G I PSL +L LT LN+S N L P S + +E+LD S L + + LP ++I+ LS + HG VP + +L F ++ +G +P
Sbjct: 53 CYWEGITCNQDGWVTRLHLPSKGLKGGIHPSLGNLTHLTHLNLSHNS-----LYCPTSNEIEFFFPLNCLEILDLSYNL-LSGELPLSLPSNIQIVDLSTNHFHGVVPSSFFQQARNLTSFNLSNNTFSGPIP 179
BLAST of mRNA_M-pyrifera_M_contig127325.5503.1 vs. uniprot
Match: M5WGT9_PRUPE (LRRNT_2 domain-containing protein n=1 Tax=Prunus persica TaxID=3760 RepID=M5WGT9_PRUPE) HSP 1 Score: 64.7 bits (156), Expect = 1.510e-9 Identity = 53/133 (39.85%), Postives = 68/133 (51.13%), Query Frame = 1
Query: 25 CGWFGVSCNGDGVVTSLALPSNNLVGSIPPS---LASLRSLTSLNVSDNRGLSGVLLYPFSWASFPAMEVLDFSNTAYLVSIVDILLPPKLKI--LRLSGSPVHGEVP----RLPDSLVDFRVAQTQVTGAVP 396
C W G++CN DG VT L LPS L G I PS L +L LT LN+S N L G L F S +E+LD S L+S L PP I L LS + HG +P + SL F V+ ++G++P
Sbjct: 51 CQWKGITCNQDGWVTHLLLPSKELKGGIFPSSSSLGNLTHLTHLNLSHN-SLCGSLTEFF--LSLNRLEILDLSYN--LLSGELPLYPPSSNIQKLDLSSNHFHGAIPSSFFQKAWSLTSFNVSNNTLSGSIP 178
BLAST of mRNA_M-pyrifera_M_contig127325.5503.1 vs. uniprot
Match: A0A251PLE4_PRUPE (LRRNT_2 domain-containing protein n=9 Tax=Prunus TaxID=3754 RepID=A0A251PLE4_PRUPE) HSP 1 Score: 64.7 bits (156), Expect = 1.590e-9 Identity = 53/133 (39.85%), Postives = 68/133 (51.13%), Query Frame = 1
Query: 25 CGWFGVSCNGDGVVTSLALPSNNLVGSIPPS---LASLRSLTSLNVSDNRGLSGVLLYPFSWASFPAMEVLDFSNTAYLVSIVDILLPPKLKI--LRLSGSPVHGEVP----RLPDSLVDFRVAQTQVTGAVP 396
C W G++CN DG VT L LPS L G I PS L +L LT LN+S N L G L F S +E+LD S L+S L PP I L LS + HG +P + SL F V+ ++G++P
Sbjct: 57 CQWKGITCNQDGWVTHLLLPSKELKGGIFPSSSSLGNLTHLTHLNLSHN-SLCGSLTEFF--LSLNRLEILDLSYN--LLSGELPLYPPSSNIQKLDLSSNHFHGAIPSSFFQKAWSLTSFNVSNNTLSGSIP 184
BLAST of mRNA_M-pyrifera_M_contig127325.5503.1 vs. uniprot
Match: A0A2P6QN32_ROSCH (Putative non-specific serine/threonine protein kinase n=6 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6QN32_ROSCH) HSP 1 Score: 64.3 bits (155), Expect = 2.180e-9 Identity = 48/132 (36.36%), Postives = 68/132 (51.52%), Query Frame = 1
Query: 25 CGWFGVSCNGDGVVTSLALPSNNLV--GSIPPS--LASLRSLTSLNVSDNRGLSGVLLYPFSWASFPAMEVLDFSNTAYLVSIVDILLPPKLKILRLSGSPVHGEVP----RLPDSLVDFRVAQTQVTGAVP 396
C W G++CN DG VT L LPSN L G+I PS LA+L LT LN+S N LSG L + S +E+LD S + L ++++ LS + +HG V + +L F V+ +G +P
Sbjct: 53 CNWQGITCNRDGWVTHLQLPSNGLKLKGAIFPSSSLANLTHLTHLNLSHN-SLSGSLDQTEFFLSLNDLEILDLSYNLLFGVLPSSLPSSHIRMVDLSSNRLHGAVSSSFFQQAWNLTSFNVSNNTFSGPIP 183
BLAST of mRNA_M-pyrifera_M_contig127325.5503.1 vs. uniprot
Match: A0A314YP24_PRUYE (LRRNT_2 domain-containing protein n=2 Tax=Prunus TaxID=3754 RepID=A0A314YP24_PRUYE) HSP 1 Score: 62.4 bits (150), Expect = 1.020e-8 Identity = 42/129 (32.56%), Postives = 62/129 (48.06%), Query Frame = 1
Query: 25 CGWFGVSCNGDGVVTSLALPSNNLVGSIPP-SLASLRSLTSLNVSDNRGLSGVLLYPFSWASFPAMEVLDFSNTAYLVSIVDILLPPKLKILRLSGSPVHGEVPRL----PDSLVDFRVAQTQVTGAVP 396
C W G+SCN DG VT L LPS + G P SLA+L LT +N+S N L G L+ + ++EVLD S+ + L + + L + +HG +P L F + +G++P
Sbjct: 52 CHWSGISCNQDGWVTHLILPSKGIKGGFKPASLANLTHLTHINLSHN-SLYGSLVQTELFLPLKSLEVLDLSHNLLSGELPSSLPSNNILTVDLXXNHLHGAIPPTFFHGAWHLTSFNASNNTFSGSIP 179
BLAST of mRNA_M-pyrifera_M_contig127325.5503.1 vs. uniprot
Match: A0A2P6QN86_ROSCH (Putative non-specific serine/threonine protein kinase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6QN86_ROSCH) HSP 1 Score: 62.4 bits (150), Expect = 1.020e-8 Identity = 49/133 (36.84%), Postives = 70/133 (52.63%), Query Frame = 1
Query: 25 CGWFGVSCNGDGVVTSLALPSNNLV--GSIPPS--LASLRSLTSLNVSDNRGLSGVLLYPFSWASFPAMEVLDFSNTAYLVSIVDILLPPK-LKILRLSGSPVHGEVP----RLPDSLVDFRVAQTQVTGAVP 396
C W G++CN DG VT L LPS L G I PS LA+L LT LN+S N LSG L + S +E+LD S L+ ++ LP ++++ LS + +HG V + +L F V+ +G +P
Sbjct: 53 CNWEGITCNRDGWVTHLQLPSKGLKLKGGIFPSSSLANLTHLTHLNLSHN-SLSGSLDQTEFFLSLNDLEILDLSYNL-LIGVLPSSLPSSHIRMVDLSSNRLHGAVSSSFFQQAWNLTSFNVSNNTFSGPIP 183
BLAST of mRNA_M-pyrifera_M_contig127325.5503.1 vs. uniprot
Match: UPI000D091F63 (receptor-like protein 2 n=1 Tax=Rosa chinensis TaxID=74649 RepID=UPI000D091F63) HSP 1 Score: 62.4 bits (150), Expect = 1.050e-8 Identity = 49/133 (36.84%), Postives = 70/133 (52.63%), Query Frame = 1
Query: 25 CGWFGVSCNGDGVVTSLALPSNNLV--GSIPPS--LASLRSLTSLNVSDNRGLSGVLLYPFSWASFPAMEVLDFSNTAYLVSIVDILLPPK-LKILRLSGSPVHGEVP----RLPDSLVDFRVAQTQVTGAVP 396
C W G++CN DG VT L LPS L G I PS LA+L LT LN+S N LSG L + S +E+LD S L+ ++ LP ++++ LS + +HG V + +L F V+ +G +P
Sbjct: 53 CNWEGITCNRDGWVTHLQLPSKGLKLKGGIFPSSSLANLTHLTHLNLSHN-SLSGSLDQTEFFLSLNDLEILDLSYNL-LIGVLPSSLPSSHIRMVDLSSNRLHGAVSSSFFQQAWNLTSFNVSNNTFSGPIP 183 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127325.5503.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig127325.5503.1 >prot_M-pyrifera_M_contig127325.5503.1 ID=prot_M-pyrifera_M_contig127325.5503.1|Name=mRNA_M-pyrifera_M_contig127325.5503.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=132bp NKGVEKSPCGWFGVSCNGDGVVTSLALPSNNLVGSIPPSLASLRSLTSLNback to top mRNA from alignment at M-pyrifera_M_contig127325:85..480- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig127325.5503.1 ID=mRNA_M-pyrifera_M_contig127325.5503.1|Name=mRNA_M-pyrifera_M_contig127325.5503.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=396bp|location=Sequence derived from alignment at M-pyrifera_M_contig127325:85..480- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig127325:85..480- >mRNA_M-pyrifera_M_contig127325.5503.1 ID=mRNA_M-pyrifera_M_contig127325.5503.1|Name=mRNA_M-pyrifera_M_contig127325.5503.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=792bp|location=Sequence derived from alignment at M-pyrifera_M_contig127325:85..480- (Macrocystis pyrifera P11B4 male)back to top |