mRNA_M-pyrifera_M_contig127310.5499.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig127310.5499.1 vs. uniprot
Match: A0A2D6BTE8_9DELT (LLM class flavin-dependent oxidoreductase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D6BTE8_9DELT) HSP 1 Score: 204 bits (519), Expect = 6.870e-63 Identity = 97/169 (57.40%), Postives = 117/169 (69.23%), Query Frame = 1
Query: 1 LATISELAPGRLRLGVGVGGEDRHEIEICGIDPTTRGARLDECIHVVRALSTGEKLTFHGSHIDVTDAQILPAVEPSIPLIVGGRSTAAVRRAGRLGDGWLGIWASPSRFSEVVDQTAAIADECGREGVLWRHGMQVWCSFGKS-DVAGGRLARSMEQLYQVPFGRFAR 504
+A+++E APGRL LGVG+GGEDRHEIEICG+DP TRG R DEC+ +R L GEK + G DA ILPA +P +PL++GGRS AAVRRAGR GDGWLG+W S +RF EV+DQ A GR+ W HG+QVW DVA GRLAR ME Y+ P+ RF R
Sbjct: 75 IASLAEAAPGRLVLGVGLGGEDRHEIEICGVDPATRGRRTDECLVALRGLLGGEKFSLDGEFFQFEDAWILPAPDPPVPLVIGGRSDAAVRRAGRHGDGWLGVWCSATRFGEVIDQVDRHASSAGRKAPAWEHGLQVWVGVDADRDVARGRLARGMEGFYRTPYERFER 243
BLAST of mRNA_M-pyrifera_M_contig127310.5499.1 vs. uniprot
Match: A0A399XKM4_9BACT (LLM class flavin-dependent oxidoreductase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A399XKM4_9BACT) HSP 1 Score: 202 bits (513), Expect = 1.280e-61 Identity = 90/169 (53.25%), Postives = 122/169 (72.19%), Query Frame = 1
Query: 1 LATISELAPGRLRLGVGVGGEDRHEIEICGIDPTTRGARLDECIHVVRALSTGEKLTFHGSHIDVTDAQILPAVEPSIPLIVGGRSTAAVRRAGRLGDGWLGIWASPSRFSEVVDQTAAIADECGREGVLWRHGMQVWCSFGKS-DVAGGRLARSMEQLYQVPFGRFAR 504
L+T+S LAPGRL LGVGVGGEDRHE+EIC +DP++RG R DECI +V+AL G+ + F G D+ A ++P P+ P+++GGRS AA+RR GR GDGW+G W SP RF+ Q A +A+E GR + W H +Q WC FG+S + A GR+AR+M+ LY++PF +F R
Sbjct: 102 LSTLSSLAPGRLTLGVGVGGEDRHEVEICSVDPSSRGRRTDECIQIVKALLGGQAVDFKGEFFDIERALVIPPTVPAPPIVIGGRSDAAIRRTGRYGDGWIGTWVSPDRFAAATAQIADLAEESGRGVLRWHHAVQTWCGFGESREDARGRVARAMQGLYRIPFEKFER 270
BLAST of mRNA_M-pyrifera_M_contig127310.5499.1 vs. uniprot
Match: UPI00177D38AF (LLM class flavin-dependent oxidoreductase n=1 Tax=Nocardioides cynanchi TaxID=2558918 RepID=UPI00177D38AF) HSP 1 Score: 197 bits (501), Expect = 3.820e-60 Identity = 93/169 (55.03%), Postives = 117/169 (69.23%), Query Frame = 1
Query: 1 LATISELAPGRLRLGVGVGGEDRHEIEICGIDPTTRGARLDECIHVVRALSTGEKLTFHGSHIDVTDAQILPAVEPSIPLIVGGRSTAAVRRAGRLGDGWLGIWASPSRFSEVVDQTAAIADECGREGVLWRHGMQVWCSFGKSDVAGGR-LARSMEQLYQVPFGRFAR 504
L+T++E APGRL LGVGVGGEDRHE+E+CG+DP TRG R DEC+ V+R L G+ +T HG D+ +A +LPA +P++VGGRS AA+ RA R GDGWLGIW S R++EVV + A +AD GR V WRHG+ VWC G G LA +M LY +PF FAR
Sbjct: 76 LSTLAESAPGRLVLGVGVGGEDRHEVEVCGVDPRTRGRRTDECLAVLRGLLAGDPVTHHGDFFDLEEALVLPAPSLPVPIVVGGRSDAALARAARFGDGWLGIWVSARRYAEVVSRIAELADAEGRGEVAWRHGLNVWCGLGADPTEGREHLAAAMTALYGLPFEAFAR 244
BLAST of mRNA_M-pyrifera_M_contig127310.5499.1 vs. uniprot
Match: A0A2D7I5X8_9DELT (LLM class flavin-dependent oxidoreductase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D7I5X8_9DELT) HSP 1 Score: 197 bits (500), Expect = 8.300e-60 Identity = 87/167 (52.10%), Postives = 118/167 (70.66%), Query Frame = 1
Query: 1 LATISELAPGRLRLGVGVGGEDRHEIEICGIDPTTRGARLDECIHVVRALSTGEKLTFHGSHIDVTDAQILPAVEPSIPLIVGGRSTAAVRRAGRLGDGWLGIWASPSRFSEVVDQTAAIADECGREGVLWRHGMQVWCSFGKS-DVAGGRLARSMEQLYQVPFGRF 498
+A++ E APGRL LGVG+GGEDRHEIEICG+DP+TRG R +EC+ +VR L +GE + F G ++ A I PA +P++P ++GGRS AA+RR GR GDGWLG+W SP R++EV+ Q A E R+ V W+HG+Q+W + A RLA ME +Y++PF RF
Sbjct: 91 IASLCESAPGRLVLGVGIGGEDRHEIEICGVDPSTRGRRTNECLEIVRGLLSGEPIDFSGEFFELHQALIRPAPDPAVPFLIGGRSDAAIRRTGRFGDGWLGVWCSPRRYAEVISQIKEHAQEANRKAVRWQHGLQIWVGIDSDRNSARARLAAQMESMYKIPFERF 257
BLAST of mRNA_M-pyrifera_M_contig127310.5499.1 vs. uniprot
Match: A0A424JRN7_9PROT (LLM class flavin-dependent oxidoreductase n=2 Tax=Bacteria TaxID=2 RepID=A0A424JRN7_9PROT) HSP 1 Score: 195 bits (496), Expect = 3.330e-59 Identity = 89/167 (53.29%), Postives = 116/167 (69.46%), Query Frame = 1
Query: 1 LATISELAPGRLRLGVGVGGEDRHEIEICGIDPTTRGARLDECIHVVRALSTGEKLTFHGSHIDVTDAQILPAVEPSIPLIVGGRSTAAVRRAGRLGDGWLGIWASPSRFSEVVDQTAAIADECGREGVLWRHGMQVWCSFGKS-DVAGGRLARSMEQLYQVPFGRF 498
+A++ E APGRL LGVGVGGEDRHEIEICG+DP+TRG R +EC+ V+R L +GE F G + A I P +P +P+++GGRS AA+RR RLGDGWLG+W SP R+ +V+ Q A A E GR V WRHG+Q+W ++ + A LA ME +YQ+PF RF
Sbjct: 91 IASLCESAPGRLVLGVGVGGEDRHEIEICGVDPSTRGRRTNECLEVLRGLLSGESTDFSGEFFQLEKALIKPCPDPPVPILIGGRSDAAIRRTARLGDGWLGVWCSPRRYKDVLAQVAEEASEAGRNDVAWRHGLQIWVGVDETREAARKHLAARMESMYQIPFERF 257
BLAST of mRNA_M-pyrifera_M_contig127310.5499.1 vs. uniprot
Match: A0A6G0A5K3_9ACTN (LLM class flavin-dependent oxidoreductase n=2 Tax=Bacteria TaxID=2 RepID=A0A6G0A5K3_9ACTN) HSP 1 Score: 194 bits (492), Expect = 1.010e-58 Identity = 93/169 (55.03%), Postives = 116/169 (68.64%), Query Frame = 1
Query: 1 LATISELAPGRLRLGVGVGGEDRHEIEICGIDPTTRGARLDECIHVVRALSTGEKLTFHGSHIDVTDAQILPAVEPSIPLIVGGRSTAAVRRAGRLGDGWLGIWASPSRFSEVVDQTAAIADECGREGVLWRHGMQVWCSFGKS-DVAGGRLARSMEQLYQVPFGRFAR 504
L TISELAPGRL LGVGVGGEDRHE+EICG+DP++RG R+DE + V+R L +G ++FHG D+ DA + P IP++VGGRS AA+RRA R G+GW IW SP RF E V + +IA GR+ V +H + VWC FG D A LA +ME YQ+PF RF R
Sbjct: 83 LVTISELAPGRLVLGVGVGGEDRHEVEICGVDPSSRGRRMDESLEVLRGLLSGRPVSFHGEFFDIDDALVAPVPSEPIPVLVGGRSDAAIRRAARFGEGWWAIWVSPRRFGEAVSEIESIAIGEGRDRVPMQHALNVWCGFGSGRDEARAALAPTMEAFYQLPFERFER 251
BLAST of mRNA_M-pyrifera_M_contig127310.5499.1 vs. uniprot
Match: UPI001C96662C (LLM class flavin-dependent oxidoreductase n=1 Tax=Modestobacter marinus TaxID=477641 RepID=UPI001C96662C) HSP 1 Score: 193 bits (491), Expect = 1.550e-58 Identity = 96/169 (56.80%), Postives = 117/169 (69.23%), Query Frame = 1
Query: 1 LATISELAPGRLRLGVGVGGEDRHEIEICGIDPTTRGARLDECIHVVRALSTGEKLTFHGSHIDVTDAQILPAVEPSIPLIVGGRSTAAVRRAGRLGDGWLGIWASPSRFSEVVDQTAAIADECGREGVLWRHGMQVWCSFGKS-DVAGGRLARSMEQLYQVPFGRFAR 504
LA ++ LAPGRL LGVGVGGED HE E+CG+DPTTRG R DE + +VR L TGE +T G V +AQ+LP +P+++GGRS AAVRRA R GDGWLGIW SP RF+ V+ + A A GR V WRHG+QVWC FG + A G LA +ME +Y +PF FAR
Sbjct: 86 LADLAALAPGRLVLGVGVGGEDPHEFEVCGVDPTTRGRRTDEALPLVRRLLTGEPVTSAGPCFPVREAQVLPPAG-DLPIVIGGRSAAAVRRAARHGDGWLGIWISPRRFATVIAEVAEQAAAAGRTDVEWRHGLQVWCGFGAGVEAATGPLAAAMESMYGLPFSSFAR 253
BLAST of mRNA_M-pyrifera_M_contig127310.5499.1 vs. uniprot
Match: UPI0013EF9D6E (LLM class flavin-dependent oxidoreductase n=1 Tax=Frankia TaxID=1854 RepID=UPI0013EF9D6E) HSP 1 Score: 193 bits (491), Expect = 2.950e-58 Identity = 86/169 (50.89%), Postives = 117/169 (69.23%), Query Frame = 1
Query: 1 LATISELAPGRLRLGVGVGGEDRHEIEICGIDPTTRGARLDECIHVVRALSTGEKLTFHGSHIDVTDAQILPAVEPSIPLIVGGRSTAAVRRAGRLGDGWLGIWASPSRFSEVVDQTAAIADECGREGVLWRHGMQVWCSFGKS-DVAGGRLARSMEQLYQVPFGRFAR 504
+AT++ +APGR GVG+GGEDR E+E CG+DP TRG R+DE + ++RAL GE +T G H + + ++ P +P+++GGRS AAVRRAGR GDGWLG+W SP RF+ VV A GR GV+WRHG+ WC FG+S + AG ++R+ME Y VPF RF++
Sbjct: 100 VATLAAIAPGRFVFGVGIGGEDRAEVEACGVDPATRGRRMDEALAILRALLAGEAVTVDGEHFRLREVRVSPPPPGGVPIVIGGRSAAAVRRAGRHGDGWLGVWISPDRFASVVADVDHTAVSSGRHGVVWRHGLLAWCGFGRSVEAAGALVSRAMEDFYGVPFERFSK 268
BLAST of mRNA_M-pyrifera_M_contig127310.5499.1 vs. uniprot
Match: A0A7V8YP08_9ACTN (LLM class flavin-dependent oxidoreductase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V8YP08_9ACTN) HSP 1 Score: 191 bits (486), Expect = 8.310e-58 Identity = 90/167 (53.89%), Postives = 116/167 (69.46%), Query Frame = 1
Query: 1 LATISELAPGRLRLGVGVGGEDRHEIEICGIDPTTRGARLDECIHVVRALSTGEKLTFHGSHIDVTDAQILPAVEPSIPLIVGGRSTAAVRRAGRLGDGWLGIWASPSRFSEVVDQTAAIADECGREGVLWRHGMQVWCSFGKS-DVAGGRLARSMEQLYQVPFGRF 498
L+T++ +APGRL GVG+GGEDRHE+E+CGIDP TRG R+DE + V+RAL TGE +TFHG + + +A I PA IP++VGGRS AA RRAGRLG+GW+G+W S RF++V++ AD GR V W H VWC+FG + D RLA ME Y +PF F
Sbjct: 83 LSTVAHMAPGRLVFGVGIGGEDRHEVEVCGIDPRTRGRRMDEHLTVLRALLTGEPVTFHGEFVSIDEACIQPAPPLPIPIVVGGRSDAAARRAGRLGEGWVGVWNSARRFADVMEIVGEEADRVGRGDVEWCHAQTVWCAFGPNRDAVRDRLATKMEHYYGLPFDSF 249
BLAST of mRNA_M-pyrifera_M_contig127310.5499.1 vs. uniprot
Match: UPI001EF62619 (LLM class flavin-dependent oxidoreductase n=6 Tax=Frankia TaxID=1854 RepID=UPI001EF62619) HSP 1 Score: 192 bits (488), Expect = 1.220e-57 Identity = 87/169 (51.48%), Postives = 118/169 (69.82%), Query Frame = 1
Query: 1 LATISELAPGRLRLGVGVGGEDRHEIEICGIDPTTRGARLDECIHVVRALSTGEKLTFHGSHIDVTDAQILPAVEPSIPLIVGGRSTAAVRRAGRLGDGWLGIWASPSRFSEVVDQTAAIADECGREGVLWRHGMQVWCSFGKS-DVAGGRLARSMEQLYQVPFGRFAR 504
+AT++ LAPGR GVG+GGEDR EIE CG+DP TRG R+DE + V+RAL GE +T G H + D ++ P ++P+++GGRS AAVRRAGR GDGWLG+W SP R++ V + +A GR G+ WRH + VWC FG+S + AG ++R+ME Y VPF RF++
Sbjct: 120 VATLAALAPGRFVFGVGIGGEDRAEIEACGVDPATRGRRMDEALVVLRALLAGEAVTVDGEHFRLRDVRVSPPPAVAVPIVIGGRSAAAVRRAGRHGDGWLGVWVSPDRYAAVTAEIDGVAVSAGRTGMAWRHALLVWCGFGRSVEDAGCSVSRAMESFYGVPFDRFSK 288 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127310.5499.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig127310.5499.1 >prot_M-pyrifera_M_contig127310.5499.1 ID=prot_M-pyrifera_M_contig127310.5499.1|Name=mRNA_M-pyrifera_M_contig127310.5499.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=168bp LATISELAPGRLRLGVGVGGEDRHEIEICGIDPTTRGARLDECIHVVRALback to top mRNA from alignment at M-pyrifera_M_contig127310:2..505+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig127310.5499.1 ID=mRNA_M-pyrifera_M_contig127310.5499.1|Name=mRNA_M-pyrifera_M_contig127310.5499.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=504bp|location=Sequence derived from alignment at M-pyrifera_M_contig127310:2..505+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig127310:2..505+ >mRNA_M-pyrifera_M_contig127310.5499.1 ID=mRNA_M-pyrifera_M_contig127310.5499.1|Name=mRNA_M-pyrifera_M_contig127310.5499.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1008bp|location=Sequence derived from alignment at M-pyrifera_M_contig127310:2..505+ (Macrocystis pyrifera P11B4 male)back to top |