mRNA_M-pyrifera_M_contig127290.5493.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig127290.5493.1 vs. uniprot
Match: A0A6P8YJ38_THRPL (protein CutA homolog n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8YJ38_THRPL) HSP 1 Score: 131 bits (330), Expect = 4.140e-37 Identity = 63/96 (65.62%), Postives = 76/96 (79.17%), Query Frame = 1
Query: 25 LVYVTAPSAEVAKGLARQLVTHRLAACVNIVPSVTSVYEWEGRIEEDTECLLMIKTRNDPVAALSSLVEEEHPYDVPEVISVPIEGGSEKYLAWIA 312
+ YVTAPS EVAK LAR +V +LAACVNIVP VTSVYEWEG++ ED+E L+MIKTR +A + LV+ +HPYD PEVISVPIE GSE YL W++
Sbjct: 43 IAYVTAPSEEVAKKLARSIVQQKLAACVNIVPKVTSVYEWEGKLNEDSEVLMMIKTRTSLIADVVQLVKNDHPYDCPEVISVPIESGSEDYLKWVS 138
BLAST of mRNA_M-pyrifera_M_contig127290.5493.1 vs. uniprot
Match: UPI000C204DF4 (protein CutA homolog n=1 Tax=Onthophagus taurus TaxID=166361 RepID=UPI000C204DF4) HSP 1 Score: 127 bits (320), Expect = 1.330e-35 Identity = 59/93 (63.44%), Postives = 76/93 (81.72%), Query Frame = 1
Query: 31 YVTAPSAEVAKGLARQLVTHRLAACVNIVPSVTSVYEWEGRIEEDTECLLMIKTRNDPVAALSSLVEEEHPYDVPEVISVPIEGGSEKYLAWI 309
YVTAP+ EVAK +A LV+H+LAACVNI+P +TSVYEWEG+IEED+E L+MIKTR+ + L+ V+ HPY V EVIS+PIEGG+++YL WI
Sbjct: 43 YVTAPNEEVAKKIAHGLVSHKLAACVNIIPKITSVYEWEGKIEEDSEVLMMIKTRSTKIPELTEFVKSNHPYTVCEVISIPIEGGNQQYLNWI 135
BLAST of mRNA_M-pyrifera_M_contig127290.5493.1 vs. uniprot
Match: UPI000614C902 (protein CutA homolog n=1 Tax=Megachile rotundata TaxID=143995 RepID=UPI000614C902) HSP 1 Score: 123 bits (309), Expect = 6.210e-34 Identity = 61/96 (63.54%), Postives = 74/96 (77.08%), Query Frame = 1
Query: 25 LVYVTAPSAEVAKGLARQLVTHRLAACVNIVPSVTSVYEWEGRIEEDTECLLMIKTRNDPVAALSSLVEEEHPYDVPEVISVPIEGGSEKYLAWIA 312
+VYVT P+ EVAK LA LV +LAACVNI+P +TSVYEW+ I ED E LLMIKTR D V AL+ V+E HPY+V EVIS+PI+ G+EKYL WI+
Sbjct: 39 VVYVTVPTQEVAKKLAHGLVKDKLAACVNIIPGLTSVYEWKNEINEDNELLLMIKTRTDTVNALTKYVKENHPYEVCEVISLPIQNGNEKYLQWIS 134
BLAST of mRNA_M-pyrifera_M_contig127290.5493.1 vs. uniprot
Match: A0A1I8AQ40_9BILA (Uncharacterized protein n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I8AQ40_9BILA) HSP 1 Score: 123 bits (308), Expect = 1.320e-33 Identity = 60/104 (57.69%), Postives = 75/104 (72.12%), Query Frame = 1
Query: 25 LVYVTAPSAEVAKGLARQLVTHRLAACVNIVPSVTSVYEWEGRIEEDTECLLMIKTRNDPVAALSSLVEEEHPYDVPEVISVPIEGGSEKYLAWIAFETSKVPS 336
+VYVT PS EVA+ ++R +V +LAACVNIVP VTS+YEWE +IEE +E LL+IKTR + + L V HPYDVPE IS+PIE GSE YL W+ +T PS
Sbjct: 47 VVYVTVPSMEVARNISRSIVGGKLAACVNIVPGVTSIYEWENKIEESSELLLIIKTREEAIEELKKEVHRLHPYDVPEFISLPIEEGSEPYLKWVKDQTQFSPS 150
BLAST of mRNA_M-pyrifera_M_contig127290.5493.1 vs. uniprot
Match: A0A1X7V6M9_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7V6M9_AMPQE) HSP 1 Score: 122 bits (307), Expect = 1.720e-33 Identity = 53/102 (51.96%), Postives = 78/102 (76.47%), Query Frame = 1
Query: 16 NAVLVYVTAPSAEVAKGLARQLVTHRLAACVNIVPSVTSVYEWEGRIEEDTECLLMIKTRNDPVAALSSLVEEEHPYDVPEVISVPIEGGSEKYLAWIAFET 321
+ ++ +VT PS EVA+ L+R ++ RLAACVNI+P +TS+YEWEG ++ED+E L+++KT D +++L+S +E+ HPYDVPEVIS I GS+KYL W+ T
Sbjct: 47 SCLVTFVTCPSMEVARDLSRNILRSRLAACVNIIPQITSIYEWEGELQEDSEFLMVVKTSKDQISSLTSFIEQNHPYDVPEVISTEINHGSKKYLDWVMSST 148
BLAST of mRNA_M-pyrifera_M_contig127290.5493.1 vs. uniprot
Match: A0A1I8B6P6_MELHA (Uncharacterized protein n=1 Tax=Meloidogyne hapla TaxID=6305 RepID=A0A1I8B6P6_MELHA) HSP 1 Score: 121 bits (304), Expect = 1.870e-33 Identity = 55/99 (55.56%), Postives = 76/99 (76.77%), Query Frame = 1
Query: 25 LVYVTAPSAEVAKGLARQLVTHRLAACVNIVPSVTSVYEWEGRIEEDTECLLMIKTRNDPVAALSSLVEEEHPYDVPEVISVPIEGGSEKYLAWIAFET 321
+VYVT PSAE+ K +A++++ RLAACVNI+P +TS+YEW+G++EE+ E LL+IKT +D + L +V + HPYDVPE I +PIE GSE YL WI +T
Sbjct: 12 VVYVTVPSAEIGKNIAKEIIQKRLAACVNIIPHLTSIYEWKGKVEEENESLLIIKTESDRLIQLEEIVTKIHPYDVPEFIVLPIEKGSEPYLKWIYEQT 110
BLAST of mRNA_M-pyrifera_M_contig127290.5493.1 vs. uniprot
Match: A0A4Z2F0H5_9TELE (Protein CutA n=1 Tax=Liparis tanakae TaxID=230148 RepID=A0A4Z2F0H5_9TELE) HSP 1 Score: 121 bits (304), Expect = 2.230e-33 Identity = 58/93 (62.37%), Postives = 73/93 (78.49%), Query Frame = 1
Query: 31 YVTAPSAEVAKGLARQLVTHRLAACVNIVPSVTSVYEWEGRIEEDTECLLMIKTRNDPVAALSSLVEEEHPYDVPEVISVPIEGGSEKYLAWI 309
+VT P+A VAK LAR +V +LAACVNI+P++TSVYEW+G+IEED+E LLMIKTR+ V AL+ V HPY+V EVIS+PIE G+ YL WI
Sbjct: 29 FVTCPNASVAKELARAIVERKLAACVNIIPAITSVYEWQGKIEEDSEVLLMIKTRSSKVPALAEYVRSHHPYEVAEVISLPIEQGNPPYLKWI 121
BLAST of mRNA_M-pyrifera_M_contig127290.5493.1 vs. uniprot
Match: UPI001C9B30C3 (protein CutA homolog n=1 Tax=Colletes gigas TaxID=935657 RepID=UPI001C9B30C3) HSP 1 Score: 122 bits (305), Expect = 2.910e-33 Identity = 58/95 (61.05%), Postives = 76/95 (80.00%), Query Frame = 1
Query: 25 LVYVTAPSAEVAKGLARQLVTHRLAACVNIVPSVTSVYEWEGRIEEDTECLLMIKTRNDPVAALSSLVEEEHPYDVPEVISVPIEGGSEKYLAWI 309
+VYVT P+ E AK +A LV ++LAACVNI+PS+TSVYEW+ +I ED+E L+MIKTR D V +L+ V+E HPY+V EVIS+PI+ G+EKYL WI
Sbjct: 39 VVYVTVPTQEDAKTIAHGLVKNKLAACVNIIPSITSVYEWKNKINEDSELLMMIKTRTDTVDSLTKYVKENHPYEVCEVISLPIQNGNEKYLQWI 133
BLAST of mRNA_M-pyrifera_M_contig127290.5493.1 vs. uniprot
Match: A0A0L7R8S8_9HYME (Protein CutA like protein n=1 Tax=Habropoda laboriosa TaxID=597456 RepID=A0A0L7R8S8_9HYME) HSP 1 Score: 121 bits (304), Expect = 3.780e-33 Identity = 60/94 (63.83%), Postives = 73/94 (77.66%), Query Frame = 1
Query: 31 YVTAPSAEVAKGLARQLVTHRLAACVNIVPSVTSVYEWEGRIEEDTECLLMIKTRNDPVAALSSLVEEEHPYDVPEVISVPIEGGSEKYLAWIA 312
YVT P+ +VAK LA LV ++LAACVNI+P +TSVYEW+ I ED+E LLMIKTR D V AL+ V E HPY+V EVIS+PI+ GSEKYL WI+
Sbjct: 41 YVTVPTEDVAKKLAHGLVKNKLAACVNIIPQLTSVYEWKNEINEDSELLLMIKTRTDTVDALTKYVMENHPYEVCEVISLPIKNGSEKYLKWIS 134
BLAST of mRNA_M-pyrifera_M_contig127290.5493.1 vs. uniprot
Match: UPI0006C9B515 (protein CutA homolog n=1 Tax=Trichogramma pretiosum TaxID=7493 RepID=UPI0006C9B515) HSP 1 Score: 121 bits (304), Expect = 4.370e-33 Identity = 58/94 (61.70%), Postives = 74/94 (78.72%), Query Frame = 1
Query: 31 YVTAPSAEVAKGLARQLVTHRLAACVNIVPSVTSVYEWEGRIEEDTECLLMIKTRNDPVAALSSLVEEEHPYDVPEVISVPIEGGSEKYLAWIA 312
YVT P+ EVAK LA LV+ +LAACVNI+P +TSVYEW+ I ED E LLMIKTR D V AL+ V+E HPY+V EVIS+PI+ G+++YL+WI+
Sbjct: 40 YVTVPTDEVAKKLAHGLVSKKLAACVNIIPKITSVYEWKNEINEDNELLLMIKTRTDTVDALTKFVKENHPYEVCEVISLPIQNGNDQYLSWIS 133 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127290.5493.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig127290.5493.1 >prot_M-pyrifera_M_contig127290.5493.1 ID=prot_M-pyrifera_M_contig127290.5493.1|Name=mRNA_M-pyrifera_M_contig127290.5493.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=113bp MQRLANAVLVYVTAPSAEVAKGLARQLVTHRLAACVNIVPSVTSVYEWEGback to top mRNA from alignment at M-pyrifera_M_contig127290:11..349+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig127290.5493.1 ID=mRNA_M-pyrifera_M_contig127290.5493.1|Name=mRNA_M-pyrifera_M_contig127290.5493.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=339bp|location=Sequence derived from alignment at M-pyrifera_M_contig127290:11..349+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig127290:11..349+ >mRNA_M-pyrifera_M_contig127290.5493.1 ID=mRNA_M-pyrifera_M_contig127290.5493.1|Name=mRNA_M-pyrifera_M_contig127290.5493.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=678bp|location=Sequence derived from alignment at M-pyrifera_M_contig127290:11..349+ (Macrocystis pyrifera P11B4 male)back to top |