mRNA_M-pyrifera_M_contig12724.5483.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12724.5483.1 vs. uniprot
Match: A0A6H5L0Q6_9PHAE (PNPLA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Q6_9PHAE) HSP 1 Score: 416 bits (1068), Expect = 8.460e-139 Identity = 205/276 (74.28%), Postives = 232/276 (84.06%), Query Frame = 1
Query: 16 ASVRSSPPSLSEWLKEGPFVLAMSPGFFGFYAHIGALVALEAAGLLEKVSFAVGASAGGLVAGLFASGMSPEVMGKTVVKFRRADFWDPVGFGGLLRGKKFEGIVENTLPEGVQRFDQCRVPLAVSAFDVSRLTTRVVNEGRIAPALRATCTFPGLFAPVWHEQGVLVDGGIRDTTGMWCVPEEQENCRRVLNVTFGCRDGRGVCVPPSRFPTESNPRPVKE-MEIASLALTGLPRPHPFAMERGAEALEVRRGFAQGTCIYGHPLVQQMPASVWL 840
A V SP SLS WLKEGPFVL+MSPGFFGFYAHIGAL+AL+ GLL +VSFA GASAGGLVAGLFA+G+SP MG TVVKFRR+DFWDPVGFGGLLRGKKFE IV+ TLP GV+RFDQ R+PLAVSAFDVSRLTTR ++EG IA ALRATCTFPGLF+PVWH++GVLVDGG+RDTTGMWCVPEE+++CRR+LNVTFG R+GRGVCVPPS FPT SNPRP + MEI SL LTGLPRPHPFAMERG +A+E R Q G PL++ S W+
Sbjct: 175 AGVLESPRSLSAWLKEGPFVLSMSPGFFGFYAHIGALIALDNEGLLNEVSFATGASAGGLVAGLFAAGLSPTDMGDTVVKFRRSDFWDPVGFGGLLRGKKFEDIVKGTLPGGVRRFDQGRIPLAVSAFDVSRLTTRTLDEGCIAQALRATCTFPGLFSPVWHDRGVLVDGGVRDTTGMWCVPEERQDCRRILNVTFGSRNGRGVCVPPSSFPTASNPRPAPDGMEIVSLPLTGLPRPHPFAMERGVDAMEAARN--QVAAAIGEPLLKGHGRSHWI 448
BLAST of mRNA_M-pyrifera_M_contig12724.5483.1 vs. uniprot
Match: D8LEM2_ECTSI (Patatin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEM2_ECTSI) HSP 1 Score: 406 bits (1043), Expect = 2.150e-136 Identity = 202/281 (71.89%), Postives = 230/281 (81.85%), Query Frame = 1
Query: 1 AVGFSASVRSSPPSLSEWLKEGPFVLAMSPGFFGFYAHIGALVALEAAGLLEKVSFAVGASAGGLVAGLFASGMSPEVMGKTVVKFRRADFWDPVGFGGLLRGKKFEGIVENTLPEGVQRFDQCRVPLAVSAFDVSRLTTRVVNEGRIAPALRATCTFPGLFAPVWHEQGVLVDGGIRDTTGMWCVPEEQENCRRVLNVTFGCRDGRGVCVPPSRFPTESNPRPVKE-MEIASLALTGLPRPHPFAMERGAEALEVRRGFAQGTCIYGHPLVQQMPASVWL 840
A G A V SP SLS WLKEGPFVL+MSPGFFGFYAHIGAL+AL+ GLL +VSFA GASAGGLVAGLFA+G+SP MG+TVVKFRR+DFWDPVGFGGLLRGKKFE IV+ TLP+ V+RFDQ R+PLAVSAFDVSRL TR ++EG IA ALRATCTFPGLFAPVWH++GVLVDGG+RDTTGMWCVPEE+++CRR+LNVTFG R+GRGVCVPPS FPT SNPRP + MEI SL L GL HPFAMERG +A+E R Q G PL++ S W+
Sbjct: 22 ATGDGAGVVESPRSLSAWLKEGPFVLSMSPGFFGFYAHIGALIALDNEGLLNEVSFATGASAGGLVAGLFAAGLSPTDMGETVVKFRRSDFWDPVGFGGLLRGKKFEDIVKGTLPDDVRRFDQGRIPLAVSAFDVSRLMTRTLDEGCIAQALRATCTFPGLFAPVWHDRGVLVDGGVRDTTGMWCVPEERQDCRRILNVTFGSRNGRGVCVPPSSFPTASNPRPAPDGMEIVSLPLAGLXXXHPFAMERGVDAMEAARD--QVAAAIGEPLLKGHGRSHWI 300
BLAST of mRNA_M-pyrifera_M_contig12724.5483.1 vs. uniprot
Match: A0A835YR40_9STRA (Phospholipase A(2) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR40_9STRA) HSP 1 Score: 295 bits (755), Expect = 4.940e-88 Identity = 143/248 (57.66%), Postives = 182/248 (73.39%), Query Frame = 1
Query: 34 PPSLSEWL-KEGPFVLAMSPGFFGFYAHIGALVALEAAGLLE-KVSFAVGASAGGLVAGLFASGMSPEVMGKTVVKFRRADFWDPVGFGGLLRGKKFEGIVENTLPEGVQRFDQCRVPLAVSAFDVSRLTTRVVNEGRIAPALRATCTFPGLFAPVWHEQGVLVDGGIRDTTGMWCVPEEQENCRRVLNVTFGCRDGRGVCVPPSRFPTESNPRPVK---EMEIASLALTGLPRPHPFAMERGAEALE 762
PPSL++WL ++ + L ++PGFFGFYAHIG L AL+ AGLLE KVSF GASAG LV GL+A+G++P M + VV ++R DFWDP G G +LRG+ FEG++ ++LPEGV FDQCR+PL V+ + +SR TTRV+ EG IA ALRA+CTFP LF PVWH QGVL+DGG+ DT GMW +P ++ R +LN+TFG VPPS FP S+PRP EI S A+TG+PRPHPFAM +GA A+E
Sbjct: 25 PPSLAQWLAQQSKYALGLAPGFFGFYAHIGVLKALDEAGLLEGKVSFVSGASAGALVGGLYAAGLTPSEMAQRVVAYQRGDFWDPPGVGAMLRGRAFEGLIRSSLPEGVTTFDQCRLPLGVTGYSLSRFTTRVIQEGDIALALRASCTFPVLFQPVWHPQGVLMDGGVFDTAGMWSIPSNGDDYRCILNITFGTGPVVDQVVPPSLFPCRSHPRPPSAGGRKEIVSFAITGVPRPHPFAMHKGAAAIE 272
BLAST of mRNA_M-pyrifera_M_contig12724.5483.1 vs. uniprot
Match: A0A2D5EXV4_9DELT (Patatin n=2 Tax=Myxococcales TaxID=29 RepID=A0A2D5EXV4_9DELT) HSP 1 Score: 186 bits (473), Expect = 9.720e-55 Identity = 107/250 (42.80%), Postives = 143/250 (57.20%), Query Frame = 1
Query: 37 PSLSEWLKEGPFVLAMSPGFFGFYAHIGALVALEAAGLLEKVSFAVGASAGGLVAGLFASGMSPEVMGKTVVKFRRADFWDPVGFGGLLRGKKFEGIVENTLPEGVQRFDQCRVPLAVSAFDVSRLTTRVVNEGRIAPALRATCTFPGLFAPVWHEQGVLVDGGIRDTTGMWCVPEEQENCRRVLNVTFGCRD-----GRGVCVPPSRFPTESNPRPVKEMEIASLALTGLPRPHPFAMERGAEALEVRR 771
P+L EWL+E PF L +S GFFGF+AH G + LE A LL + G+SAG LVAG +A+G+ + +T ++ R DFWDP GLLRG+ F G++E TLP G RF++CR P+AVS FDV TRV++ G IAPA+ A+C FPG+F PVW ++ +DGGI D G +P E RVL G R G P+R + ++ + GLPR PF +E+G A E R
Sbjct: 4 PTLREWLREEPFTLGLSSGFFGFFAHAGFVEVLEEASLLP--ARLAGSSAGALVAGCWAAGLDAPAIARTFLELERRDFWDPAPGAGLLRGRLFRGLLEETLPRG--RFEECRRPVAVSVFDVLGRRTRVLDRGPIAPAVHASCAFPGMFQPVWIDRRPYLDGGIADRPGALALPPEG----RVLYHHLGSRSPWRRRGSAALAIPAR------------PNLRAVVVEGLPRVSPFRLEQGRVAYEHAR 233
BLAST of mRNA_M-pyrifera_M_contig12724.5483.1 vs. uniprot
Match: A0A6N7Q127_9DELT (Patatin n=1 Tax=Polyangium spumosum TaxID=889282 RepID=A0A6N7Q127_9DELT) HSP 1 Score: 177 bits (449), Expect = 5.210e-51 Identity = 110/252 (43.65%), Postives = 147/252 (58.33%), Query Frame = 1
Query: 16 ASVRSSPPSLSEWLKEGPFVLAMSPGFFGFYAHIGALVALEAAGLLE-KVSFAVGASAGGLVAGLFASGMSPEVMGKTVVKFRRADFWDPVGFGGLLRGKKFEGIVENTLPEGVQRFDQCRVPLAVSAFDVSRLTTRVVNEGRIAPALRATCTFPGLFAPVWHEQGVLVDGGIRDTTGMWCVPEEQENCRRVLNVTFGCRDG-RGVCVPPSRFPTESNPRPVKEMEIASLALTGLPRPHPFAMERGAEALEV 765
ASVR + P+L EWL EGPF + +S GFFGF+AH G + LE GL +VS G+SAG LV G++A+G S + +++ +R DFWD GLL GK F +E LP V+ FD+CRVPLAVS +DV TRV+ EG +APA++A+CT PGLF PVWHE L+DGGI D G+ +P + R+L R R V P + P +A+L + LPR PF + GA A ++
Sbjct: 10 ASVRPT-PTLREWLHEGPFSMGLSSGFFGFFAHAGVMTVLEDEGLSPARVS---GSSAGALVGGIWAAGASAVTIRDELLRLKREDFWDMRPGPGLLAGKLFRARLEALLP--VRTFDRCRVPLAVSVYDVFSRKTRVLAEGPLAPAIQASCTVPGLFHPVWHEGRPLLDGGILDRHGLAGMPPGE----RLLYHHLASRSPWRKVNSPSLKVPERGG--------MAALVIESLPRVGPFRLPEGARAFDI 243
BLAST of mRNA_M-pyrifera_M_contig12724.5483.1 vs. uniprot
Match: A0A4U1H7W2_9DELT (Patatin n=1 Tax=Polyangium aurulentum TaxID=2567896 RepID=A0A4U1H7W2_9DELT) HSP 1 Score: 176 bits (447), Expect = 1.160e-50 Identity = 104/252 (41.27%), Postives = 139/252 (55.16%), Query Frame = 1
Query: 34 PPSLSEWLKEGPFVLAMSPGFFGFYAHIGALVALEAAGLLEKVSFAVGASAGGLVAGLFASGMSPEVMGKTVVKFRRADFWDPVGFGGLLRGKKFEGIVENTLPEGVQRFDQCRVPLAVSAFDVSRLTTRVVNEGRIAPALRATCTFPGLFAPVWHEQGVLVDGGIRDTTGMWCVPEEQENCRRVLNVT--FGCRDGRGVCVPPSRFPTESNPRPVKEMEIASLALTGLPRPHPFAMERGAEALEVRRGFAQ 783
PP+L EWL+EGPF + MS GFFGF+AH G + LE GL + G+SAG LV GL+A+G+ + +++ RR DFWDP GLL G F ++ LP V+ FDQCR PLAVS +DV TRV+ G +APA++A+CT PGLF PVW E L+DGGI D G+ +PE L + R + VP + + +L + LPR PF + GA A E+ R A+
Sbjct: 15 PPTLREWLREGPFAIGMSSGFFGFFAHAGVMTVLEDEGLAP--ARVAGSSAGALVGGLWAAGLDAAAIRDELLRLRREDFWDPRPGLGLLAGALFRARLQALLP--VRSFDQCRAPLAVSVYDVRARGTRVLECGPLAPAIQASCTVPGLFHPVWLEGRPLLDGGILDRPGLAGMPEGTRLFYHHLAARSPWRRRQSPALAVP-------------ERQGMTALVIASLPRVGPFRLPEGARAFEIARRAAR 249
BLAST of mRNA_M-pyrifera_M_contig12724.5483.1 vs. uniprot
Match: A0A4U1J9U9_9DELT (Patatin n=1 Tax=Polyangium fumosum TaxID=889272 RepID=A0A4U1J9U9_9DELT) HSP 1 Score: 172 bits (437), Expect = 3.770e-49 Identity = 102/244 (41.80%), Postives = 139/244 (56.97%), Query Frame = 1
Query: 37 PSLSEWLKEGPFVLAMSPGFFGFYAHIGALVALEAAGLLE-KVSFAVGASAGGLVAGLFASGMSPEVMGKTVVKFRRADFWDPVGFGGLLRGKKFEGIVENTLPEGVQRFDQCRVPLAVSAFDVSRLTTRVVNEGRIAPALRATCTFPGLFAPVWHEQGVLVDGGIRDTTGMWCVPEEQENCRRVLNVTFGCRDGRGVCVPPSRFPTESNPRPVKEMEIASLALTGLPRPHPFAMERGAEALEV 765
P+L EWL+EGPF + +S GFFGF+AH G + LE GL +VS G+SAG LV G++A+G S + +++ +R DFWD GLL GK F +E LP V FD+CRVPLAVS +DV TRV+ G +APA++A+CT PGLF PVWHE L+DGGI D G+ +P ++ R + R P + PT + +L + LPR PF + GA A ++
Sbjct: 16 PTLREWLREGPFSMGLSSGFFGFFAHAGVMTVLEDEGLAPTRVS---GSSAGALVGGIWAAGASAVTIRDELLRLKREDFWDMRLGPGLLAGKLFRARLEALLP--VPTFDRCRVPLAVSVYDVFARGTRVLAGGPLAPAIQASCTVPGLFHPVWHEGRPLLDGGILDRHGLAGMPADE---RLFYHHLASRSPWRKADSPSLKVPTRDG--------MTALVIEALPRVGPFRLPEGARAFDI 243
BLAST of mRNA_M-pyrifera_M_contig12724.5483.1 vs. uniprot
Match: A0A0K1PGW7_9DELT (PNPLA domain-containing protein n=2 Tax=Vulgatibacter incomptus TaxID=1391653 RepID=A0A0K1PGW7_9DELT) HSP 1 Score: 170 bits (430), Expect = 2.910e-48 Identity = 108/246 (43.90%), Postives = 134/246 (54.47%), Query Frame = 1
Query: 40 SLSEWLKEGPFVLAMSPGFFGFYAHIGALVALEAAGLLE-KVSFAVGASAGGLVAGLFASGMSPEVMGKTVVKFRRADFWDPVGFG-GLLRGKKFEGIVENTLPEGVQRFDQCRVPLAVSAFDVSRLTTRVVNEGRIAPALRATCTFPGLFAPVWHEQGVLVDGGIRDTTGMWCVPEEQENCRRVLNVTFGCRDGRGVCVPPSRFPTESNPRPVKEMEIASLALTGLPRPHPFAMERGAEALEVRR 771
+L+EWL E PF LAMS GFF FYAH G L ALE AGL +VS G+SAG LV G +A+G+ V+ + + R DFWDP GFG GLLRG+ F +E LP + FD+CRVP AVS FDV TRV+ GR+ PA+ A+C P LF PV E DGGI D G+ +P RVL+ SR P + P + S + GLPR PF +E G A + R
Sbjct: 10 TLAEWLAEEPFALAMSSGFFSFYAHTGFLAALEDAGLTPARVS---GSSAGALVGGAWAAGVDAPVLAAELERLERRDFWDP-GFGPGLLRGRLFRERIEGLLP--AETFDRCRVPAAVSVFDVRSRKTRVIEMGRLGPAICASCAVPFLFQPVRIEGRSYFDGGILDRPGLAGMPPSTP---RVLHHHIA-----------SRSPWRMSAEPPSRQGMLSFVIDGLPRSGPFRLEEGRRAFSLAR 235
BLAST of mRNA_M-pyrifera_M_contig12724.5483.1 vs. uniprot
Match: A0A7W0VK99_9DELT (Patatin-like phospholipase family protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7W0VK99_9DELT) HSP 1 Score: 169 bits (427), Expect = 5.460e-48 Identity = 94/245 (38.37%), Postives = 134/245 (54.69%), Query Frame = 1
Query: 37 PSLSEWLKEGPFVLAMSPGFFGFYAHIGALVALEAAGLLEKVSFAVGASAGGLVAGLFASGMSPEVMGKTVVKFRRADFWDPVGFGGLLRGKKFEGIVENTLPEGVQRFDQCRVPLAVSAFDVSRLTTRVVNEGRIAPALRATCTFPGLFAPVWHEQGVLVDGGIRDTTGMWCVPEEQENCRRVLNVTFGCRDGRGVCVPPSRFPTESNPRPVKEMEIASLALTGLPRPHPFAMERGAEALEVRR 771
P+L EWL GPF +AMS GFF FYAH G AL A GL + G+SAG +VAG + +G+ PE G+ + + RR DFWDP G+L G KF+ ++ LP + R + CR+P+ +S FD+ TRV+ G +A A+RA+C PG+F PVW ++ DGGI D G+ +P + + F P P K ++ +L L GLPR +PF ++ G AL++ R
Sbjct: 2 PTLGEWLANGPFGVAMSSGFFAFYAHTGMAAALLARGL--RPIHVAGSSAGAMVAGAYGAGIDPESHGRVLSQLRREDFWDPRLGWGVLSGNKFDALLREMLP--IARIEDCRIPVRISVFDILARRTRVLETGDLATAIRASCAVPGMFHPVWIDRRPYWDGGILDRPGIAGLPPGRLLYHHITGPVF--------------------PIP-KRPDMVTLVLDGLPRANPFRLDAGRRALDLAR 221
BLAST of mRNA_M-pyrifera_M_contig12724.5483.1 vs. uniprot
Match: A0A7S3M828_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M828_9STRA) HSP 1 Score: 174 bits (440), Expect = 1.720e-46 Identity = 103/278 (37.05%), Postives = 151/278 (54.32%), Query Frame = 1
Query: 70 FVLAMSPGFFGFYAHIGALVALEAAGLLEKVSFAVGASAGGLVAGLFASGMSPEVMGKTVVKFRRADFWDPVGFGGLLRGKKFEGIVENTLPEGVQRFDQCRVPLAVSAFDVSRLTTRVVNEGRIAPALRATCTFPGLFAPVWHEQGVLVDGGIRDTTGMWCVP---------------EEQENC------RRVLNVTFGCRDGRGVCVPPSRFPTESNPRPVKEMEIASLALTGLPRPHPFAMER-GAEALEVRRGFAQGTCIYGHPLVQQMPASVW 837
+ LA++PGFFGFY HIG L ALE L S G+SAG LV G ++GM+PE M K V++ +RAD WD G GGLL+G+ FE ++E LP VQR ++C+ PLAV+ +D+ R T + EG++A A+RA+CTFPG+F PV E +DGG+ D G+ +P E QE+ + V+N+ FG +PP +K ++ ++ + +P HPF+M+ G EA + R H +Q+ A+ W
Sbjct: 53 YALALTPGFFGFYGHIGVLKALEETNCLRP-SHVSGSSAGALVGGFLSAGMTPEEMIKAVLEIKRADIWDVGGVGGLLKGELFEQLIERNLP--VQRIEECKYPLAVTTYDLMRFKTLHLTEGKLAQAMRASCTFPGMFQPVMIEGSPNIDGGVFDNVGLMALPHALGLHKSQSVNDCTECQESASDKTRMQLVVNIVFGRSSVASSVLPPQ----------LKNHKLLTVVVENIPSVHPFSMDTMGVEAYKAARAATLKALHSSH--MQEFSANHW 315 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12724.5483.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12724.5483.1 >prot_M-pyrifera_M_contig12724.5483.1 ID=prot_M-pyrifera_M_contig12724.5483.1|Name=mRNA_M-pyrifera_M_contig12724.5483.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=280bp AVGFSASVRSSPPSLSEWLKEGPFVLAMSPGFFGFYAHIGALVALEAAGLback to top mRNA from alignment at M-pyrifera_M_contig12724:3959..8672+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12724.5483.1 ID=mRNA_M-pyrifera_M_contig12724.5483.1|Name=mRNA_M-pyrifera_M_contig12724.5483.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4714bp|location=Sequence derived from alignment at M-pyrifera_M_contig12724:3959..8672+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12724:3959..8672+ >mRNA_M-pyrifera_M_contig12724.5483.1 ID=mRNA_M-pyrifera_M_contig12724.5483.1|Name=mRNA_M-pyrifera_M_contig12724.5483.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1680bp|location=Sequence derived from alignment at M-pyrifera_M_contig12724:3959..8672+ (Macrocystis pyrifera P11B4 male)back to top |