mRNA_M-pyrifera_M_contig1272.5482.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig1272.5482.1
Unique NamemRNA_M-pyrifera_M_contig1272.5482.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig1272.5482.1 vs. uniprot
Match: D8LJD9_ECTSI (PH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJD9_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 8.810e-83
Identity = 132/221 (59.73%), Postives = 170/221 (76.92%), Query Frame = 1 
Query:    1 MPVHVFHGKADHMVPIAAVEWMAEEMPACTLSVKMGGTHALLMDAGVLDCVLEFICEDFKHFEEHAADR-------ADGEAADERGP--ALSFPKHTFDHARHFKATGYLCCREGMLMKAWKDRYFVLEGFGMYEYDGPSSSTARRVVDLRGTVAHVLMDSAEA----HASDPVNRLFPFKLVDAKHRVLYYLGANTTEDRALWVEILTKASRFSMGSGEE 624
            MPVHVFHG+ADHMVP  A +WMAEEMPACT+SVKMGGTHAL+MD+GV+DCVLE +CEDFKHFEEHAA R       ++ +++  + P  A SFP HT    +HF+A G L CREG+L+K+W++RYFVL+G+ ++++DGP S+TARRVVDLRG+VA +    AEA     ++   +RLFPFKL DA HR+L+ L A +T DR+ WVE LTKASRFS GSG++
Sbjct:  287 MPVHVFHGRADHMVPFPAAQWMAEEMPACTVSVKMGGTHALIMDSGVVDCVLECMCEDFKHFEEHAASRRLKKRPPSESKSSAGKVPEAAFSFPAHT----QHFQAKGVLRCREGVLIKSWEERYFVLDGYELHQFDGPDSATARRVVDLRGSVAKMREGDAEALSRERSASTQHRLFPFKLYDANHRLLHELAAKSTGDRSSWVETLTKASRFSAGSGDD 503
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1272.5482.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJD9_ECTSI8.810e-8359.73PH domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1272contigM-pyrifera_M_contig1272:15171..23080 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score268.1
Seed ortholog evalue3.8e-69
Seed eggNOG ortholog2880.D8LJD9
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ureidoglycolate hydrolase activity
EggNOG OGs2QTP8@2759,COG3194@1
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size687
Cds size687
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1272.5482.1prot_M-pyrifera_M_contig1272.5482.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig1272 15171..23080 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815786.033386-CDS-M-pyrifera_M_contig1272:15170..152091622815786.033386-CDS-M-pyrifera_M_contig1272:15170..15209Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1272 15171..15209 +
1692277568.6755676-CDS-M-pyrifera_M_contig1272:15170..152091692277568.6755676-CDS-M-pyrifera_M_contig1272:15170..15209Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1272 15171..15209 +
1622815786.076876-CDS-M-pyrifera_M_contig1272:15941..160121622815786.076876-CDS-M-pyrifera_M_contig1272:15941..16012Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1272 15942..16012 +
1692277568.6869652-CDS-M-pyrifera_M_contig1272:15941..160121692277568.6869652-CDS-M-pyrifera_M_contig1272:15941..16012Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1272 15942..16012 +
1622815786.0873363-CDS-M-pyrifera_M_contig1272:16703..168271622815786.0873363-CDS-M-pyrifera_M_contig1272:16703..16827Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1272 16704..16827 +
1692277568.6977396-CDS-M-pyrifera_M_contig1272:16703..168271692277568.6977396-CDS-M-pyrifera_M_contig1272:16703..16827Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1272 16704..16827 +
1622815786.0994804-CDS-M-pyrifera_M_contig1272:17482..175921622815786.0994804-CDS-M-pyrifera_M_contig1272:17482..17592Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1272 17483..17592 +
1692277568.7128294-CDS-M-pyrifera_M_contig1272:17482..175921692277568.7128294-CDS-M-pyrifera_M_contig1272:17482..17592Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1272 17483..17592 +
1622815786.1468894-CDS-M-pyrifera_M_contig1272:18032..181921622815786.1468894-CDS-M-pyrifera_M_contig1272:18032..18192Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1272 18033..18192 +
1692277568.7258563-CDS-M-pyrifera_M_contig1272:18032..181921692277568.7258563-CDS-M-pyrifera_M_contig1272:18032..18192Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1272 18033..18192 +
1622815786.1591465-CDS-M-pyrifera_M_contig1272:22897..230801622815786.1591465-CDS-M-pyrifera_M_contig1272:22897..23080Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1272 22898..23080 +
1692277568.7338417-CDS-M-pyrifera_M_contig1272:22897..230801692277568.7338417-CDS-M-pyrifera_M_contig1272:22897..23080Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1272 22898..23080 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig1272.5482.1

>prot_M-pyrifera_M_contig1272.5482.1 ID=prot_M-pyrifera_M_contig1272.5482.1|Name=mRNA_M-pyrifera_M_contig1272.5482.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=229bp
MPVHVFHGKADHMVPIAAVEWMAEEMPACTLSVKMGGTHALLMDAGVLDC
VLEFICEDFKHFEEHAADRADGEAADERGPALSFPKHTFDHARHFKATGY
LCCREGMLMKAWKDRYFVLEGFGMYEYDGPSSSTARRVVDLRGTVAHVLM
DSAEAHASDPVNRLFPFKLVDAKHRVLYYLGANTTEDRALWVEILTKASR
FSMGSGEELEEFVSKRSLVTTTAGGSEGV
back to top

mRNA from alignment at M-pyrifera_M_contig1272:15171..23080+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig1272.5482.1 ID=mRNA_M-pyrifera_M_contig1272.5482.1|Name=mRNA_M-pyrifera_M_contig1272.5482.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7910bp|location=Sequence derived from alignment at M-pyrifera_M_contig1272:15171..23080+ (Macrocystis pyrifera P11B4 male)
ATGCCTGTTCATGTCTTCCATGGAAAGGCGGACCATATGGTGAGGGTCTT
CAGTAGATCAAGGGTTCACGGTGGTAACGTGATGATGATGAGGATGATGA
TGTCACTTTAGCTTATTTCCCCGAAATTCAGGCCTTGGTCGCTCCACAGG
CTTACAACAAAGGCGTCTCGATGGAGAAAACGCGTACTGGTACAAAATAA
TACGTGCACCTATCAGTACGCAAGGGAACGGTGCTGACAGACTGTGGAAT
GCCATCCCTATCGCATCCAAAGCACATAATACTGTTGTGCCGAATACATG
GCTTGTCCGTTTGGCCTGAGTGACCATCGTGATATGCATAAAGAAAGCGA
CGAGCGGGATTGCTTGCGGCATTATCAAGAAGTTCATATGCCGGCATCTA
GCCCGTTACATCATGATGTCCAAACCCTCCATGATGGGGTTGCTGGCGAT
CAAGTTGCTGTTGGACAAGGGACACGCGTTCTGGATTACAGTGCCCTCTA
TTGTGATCTAGAGAAGTTTGCCCCTTCTAGGGCAGATGCTACGTTTGCCC
TTGGGTTAGGTCCACCGTGCCGTACTTGCGCGTGTGTTGTAAGCGCCTTG
CCTTCGCGGGCGAATCCCGTATGGGCGATCGTTCATCGCCCCGTCCCCAC
TGGTTTTGTGTCTTTAGACCTGTCTACGCTTGATCACCCACTGGCTTTGT
GTCTTTCGATAATTAATGGGGTGTTTTGGCTCCCCCACCCCCCCCTGCTC
TCTTGCTGTACCGTGTTACAGGTCCCGATAGCGGCGGTGGAGTGGATGGC
GGAGGAGATGCCTGCGTGTACGTTGTCCGTGAAGATGGGAGGGTGAGAAA
ACGCCCGCTTCGCTTCCACATACTATCACCAATCAGGTTGCCAAGAAGGG
AGGCGTTGTGTGACCATATCTGCTGTCTGTCGCATCATTTGCTGTAGAAA
CGAAGTTCTATTTTAGGGCGCGACCGTGCACGGTGATGTTGCTGAATACC
TTATTGCACACATCGGACAGGTCATCTACAGAGCTCTCCCACTTCATGAC
CTACAGTAGCTCGTTCAGGGAAGATATAGGTGCCTGATCTGTACCTGGTA
CGATCTAGTTCATGTCAGCGGGTGGGAGCTGTATATTCTGCATGATCTAG
CACATGTTCATTGAGTTTGAATCTGTACTACGCAGGTGCTGCACAACCTC
TCACAGCGGCAGGTGAGGATCTAAATTATCCATCTGTAGATGATCTATCT
GTAGATGACCTATCTGATCTGTCCGATGTGTTGGTTGAGTGCCGAAGGGC
CCGGCGCCATAACTTGCGCCTGTCCTATTTCTCTTACACTCTGCTTGGTG
TACTGCTCGTCTTGGACAATGCAGCCTCTTCAGTATAGACTATATAGCAA
AATGCTGCTTGCGCAAATAGGAAAAGCGGGCACGCAATGATACCCACCAT
TTGATGCTCTTAACGGAAATGGTAACCGTCATATATGCTGCCACGTTCCG
GCGTGTTGATGGTTGTTTCGCCGTGTTTGGCAGTACACACGCTCTTTTAA
TGGATGCCGGAGTGCTGGACTGCGTGCTGGAATTCATTTGCGAGGACTTC
AAGCATTTCGAGGAGCATGCTGCAGACCGAGCAGACGGGGAAGCCGCCGA
CGAGCGGGTAAGCTTCACTCTTTCCTCACATTCCCGGAGAGAGTGGTAGT
TTACACAATGTCCTCTTTTCGTGTTCCTCGCTCAATGGGCGGTATTTTCA
GAATTGTAGATGCTTGAATTTGGTCTCGCGGTGTGCGCTTGTCGAGCATG
CGGGGCCAAACCCACCCGTGTCTGCCTACACTTCTGCTCTTGTTTCGAGA
CATGGTAGTCGCCATCAACGCGGTGTGTTCACTTTGCGCTTTCCTCCCTT
ATGTATTTGCTTCTCTCTCCGAGGGTCTCCTTGTCGTTTTCTCCGGAGTC
GTGCTATTAAGGTCAGGGGGTAGAGGGGATAGTTTCGGGCAAGAACAACT
CGGACTGACGGGGCTTCCTCATCAACTGGGCAACTACCCACCAATCGGTT
TTCACTCTAGTTTGGTTTTTTGCTGTTGGAGTATTTCCGTTGTATGTCGG
GAGGGCAGTCAAGTTTTAGGTGAGGTGCTTATATAGAGCTCCTCACGTTT
ATTCATAGGACCATAGGACCGTAGCAGCCTGAGAAAAAACAAGTACCCCT
TCCTACCGTAGCTTGACTCTCTCGCACACCCTGCCCTGCGTTACCTTGCC
GTGACGCCGATGAAAATCCCGATGATACTACTCGCTTGTTTGCATGTTCC
CGGTGGATCAAGGGACCTGCCTTAAGCTTTCCAAAACACACATTCGACCA
CGCCCGGCACTTCAAGGCAACGGGCTACCTGTGCTGCCGTGAAGGAATGC
TGATGAAGGCTTGGAAGGACAGGTGTCTTGTTGTGTCACATGCTGCTTGC
TTATTGCGTTGTTGGACCCAGGCTACAGAGTACGGCGTATACCCGTGTGG
GGAGTGGGACGTAGAAAAAAGGGGTGCATGGTGATATGAGCGGTGTGGAA
TCGTTGTTGAGGCTCCAATGAAAAAACGACGTATGTCAGTCATGCGGAAT
ACATAGTTATGGGTTGGTCCATGTTTGACCACAGCGCTGCATTTTGCCGG
AGATCCTATTAATACTCCACTCCAGAGTTTTTTTAGCCTGTCCTGTGACT
GCGAAGTAGATTTTTGACGATGAGTGAATTCGAGATTAACAGCAACCAAA
ACAATCCTGTTGCTTTGATTCAGAGGAGTTACACAGCTGGACAGGGGTGT
GGGCAGAGGCTCGGAAACACGATCGAAAGTTTGACTCCAATCCCACTGAC
CTACTGTAGCAGGTACTTTGTCCTTGAGGGGTTCGGGATGTACGAGTACG
ACGGACCAAGCAGTTCGACGGCGCGCCGTGTTGTGGACCTTAGGGGAACA
GTCGCGCATGTCCTCATGGATTCCGCTGAAGCCCATGCTTCCGACCCTGT
AAACCGGCTGTTCCCATTCAAGGTGCGATTTCCCCTATATCGTGCTGAGA
TACGCAAAGCTCTAGGGCTGTGGTTCGGAGCGAAAGTGCTATTTAAGTTT
ATCCGTTTCGGAAAAAAGCCGGCTAATCGATTTCATCGAGTAGATCGACC
TGCTTTACTTTCGAGTGAAATCGAACTCGCCAAGCGAGCCCCAATCTCCC
ACCCCCCCTCTCCCACCCCCTCGGCTGGCGAAGGGGCCACTACCCGGTAA
AGGATGGTATTCCCTAAGTTTCCTAGGGTTCTAATCCAAACGTGTCCGAC
CAAAAGTTGTGAGATTTGTAAAAATGCCAAAAAACGGTATTCCAGTTGGA
AAATCCATAAAAAGATATACCAAAGGATTTCACGCCAGTTGACGGTACAC
AAAATGAAATCACCTCAGAATAATCCCGACAGGGACATATATATTTTTTG
TCCCGGTATACCGTTTTAAGGAAAAAACATGTCGCCAAGACCAACTCTAC
AGTTCAGTCGATTGATAATGTCATGTGACCCCTCCTATTCAGAGACTACC
GAACTGCGTCCAAATTTTGCCAAACGGCCCCTATAACGGTCGACGCCCAT
ATCGCGCGCAGTGAAATTCGATAACTGACCCACACACAAGCCGCCTGCGC
CAACTTCCGCCTTCTCCGCAACCCTGTGCCTCGCGCTCGTGCGTGACCCA
CTCAAACACCCCTTGTACATGAGTCGCTAGTGCAATAATCACGGTACGAG
CATCCTTCGCAAATTACGCACATACAACACATCAGACAAATGAGGGCTCT
AACGTAGACAAGTTTGTCGCCCAACGGCACGCTCAACATCGATGCTCGCT
GCTGGCTGCAGACCGCGCAATATGGCTTCGTCCTATCGTGGGCTTGCATG
CCTAGGAGTTGGAGGAAAAAATCGGTGACCTGTTTTATCAGGGGCCGTAT
GGCTTTCCACATTATGCTCCGAATTTGAAACAGAATGTTCTTGGGTTCGT
ACGTCATCGCGTTTTTGAAGCTACCAGGCACCCTTGTATGGTAATCGTCA
CTCAGCAGCAACAGCGTTAGGGAGTTTGAGAGCAATAAGAGCAGCAGCAA
CAGCACTGATTGTTCTGATCATAGTCAATCAGCAGCAACTACGGCAGGGG
GGCTGACAGCAACAACTGCAGCAGCGTCAGCACCGCCAATTAGCAGTGCC
GCTGCTGCTGTCTGCAGCACGCCGCTGTCATTATTGCTGCTGTGCTGCTG
CTGGCTGCTGCTAGCAGTGTAAAAATTCGACGAAATGCCCTTCCAAACTT
GAAGCTTCGGCGCATAGCCTCGTATGTCCGCGGTATACCGTTTTCTGGGA
AGCATTCGATCTCGCTCGAAATACAAAAATACTCAAATCTACTCCCAAAG
CTCCCAAGTAAAGCGAGCCACGTCCACGAGGAGCAGATAAACAGTCACCA
CAACAACACACAGCGACGGTGAGAGCCAGGCTGCCGCGGGGTTTGCCGGG
CACCAACGTGTAGCGCGAAGGACAGAAGGAGGGTGGCCGTGTTCGTGCCT
GAGTATGGCCTGGTTGTGGAGTCTCGACCGGAGCACAAGCGGTACGATAT
GCGCATTTTCTAGGCAATTGTGTCCGTGTACGTACCATTGTGGACGGAAA
TGTAAGCATCGATAGGTACCCATCTTACTACCCCATTGAACCCTGCATTT
CCGTCCAGTTTGGAACGACACTTAGTGTCAGCTGATCTTTGTTGAATCTG
CGACCCTGTGTGGTCGACAACTCAAACTAGCTGAAGTCGCGCACCCACGG
GCGATGGACCTTTTCGAGACTCCGAAGTCGGGCTGCCGGCCGTTCTCGAA
TCCGACGAGTGTCGGCAGCGAGAGGGCCATCGGGGATAGGCTTGTGGAGG
AACGCCAGGAAAAGGAAAGTATCGTTTTCGTACATACTGGGTATATATGA
AGAAAATACGGTGTGCATTTATCATAGACGATTGTTTCTACAGGGGAACA
GGATGGTTATTTTTCACTGGTGACCGCTTCTACGCCAGCGGGGCGGGTCA
TATATTCGCACGCAACAACACCCGTCTACACCCACCCACCCATCCACCTG
AAGGGTCAACTCATGCGCCGGGTGCGGGTGGGTGATGTTCTGCACGAGCT
CACCATGAGGCGGGGAAGGAGAGAAAAAACTAGGTATTAATTCTCATTGT
TCTTGAACTATAGTGTTGGATAGGGGAGGCTCTCCCATCCCCTTGCCGTA
GGACCCTCAAAAGACATCCACATTCCACATTCAAATATGCATCCCATCGA
ATCATTAAATGCCTCTTATGGGACACTGCACTCTGAGAGCTCAAACCAAC
GCAAGATTCCAAGCTATGCTGGCTTTGAATCCAACGTCTTTCCAGTATAA
TCAATTCAAATAGTCAATATCTCAAGCTTCAAGGACCAAAAACTCGACGA
TCTCAGTTTTTAACCTTCAAGTATTTTTCTACCCCTGGAACCCCTCGACG
TTCAATCAGTGAGCCGTACGTAGTACAGCTTACCAAATCTGTGTCTTCCA
TATAAATCAACCACCAAACCACAGGCAATATCAACTGCAGTTGAGCACCT
TGACATCGGCCTCCCAATATTTCAACAGGTCAACCACCAAAAATTCCCAT
TCAAGACTACTAAAACTCATAGCAGTTTTCGAAAATCCATGAGCACATAC
TGCTGTACTTCTTTATATTGTGGGTGGGTTAGAGGGTAAGTGGGTTACTA
GGTGGGTGGGCCATAGGTGTGGATGGGTGTTATTGGTTCGTATTAATACC
CGCCCCGCGGGCGAAGCAACGGCCGGAACACCAGGAAAGTAAAAACATCG
TTTTCGTGCATAGATACCAGAATGAAGGAAAAACAGGGTTTGTATTTTAT
CATGGGCGACTTTTTTTCTGGGGAAAAGGGCTATTTTTTACTTGTAGTAC
GACCGCTGCTACACCAGCGGGACGGGTATGTATACGCACCCTGCAGTACC
CTTCCACACACATGGTCCACCCATCCACCCACCCACCCCACCTCACCCTT
CCCATCCACCCACCAACCCACCTACCAACCCACCCACCCTCCTAACCGCC
CAAAATATATAGCAGTACAGCAGTACGTATGTTACCCACCCACCCACCCA
CCCCACCCACTAACGTACTGGTACTTTTACTCTATAAGTGTATGTGCACC
TACCTGCCCACCTACCCACCAACCCACCCACGATATACAGCAGTACACAT
CAGCATGCAGCAGCGGGGCCGGGGTGTATACCCGCCCACCCAAACCTATC
CACACCCATAGCCCACCAACCCATCCACCCACCCCACTCACCCACCCCAC
CCACACCTACCAACCCTCTCACCCACCCACCCACCCACGATGTACAGCAG
TACAGCAGTACGCATCTTACTCACCCATCTACGTACCGGTACTTACGCTC
AAAAAGTGTATGTGCACCTAACACCAACCCACCCACCAATCCTCCCACGA
TGTACAACAGTACATACAGCAATATGTAGCAGCAGCACAGTACGTATGCT
ACCCATCCACCCACCGCAGTACATACAACAACGCATCAGTACGTATATTA
CACACACACACCACACACCCACCCCGCCCATCCGTTCCCGTATTTTTTCA
ATGGTTTTCGTGGTGTTGGTGGCTTTACGTGATTTCTTGTCAATAGCAGC
AGTAGTAGGTTAGCTCCCCAGCATCGTTATTATTAAATTATCCATACGTG
CCTCAGGGGTCCCAGGAGTACCCGAAAAAAAAACCGTGCACCCCTATCAC
CGAGCCGTAGACATGGAGGTCATACTACTAAACTATTATTAGGTTGGTTG
ACCGTCACCTGCCTGTTTCGTTCCGTTTTGCAGTTCCCTACCGAACTCTA
ACCTTGTCCTCGACACCGACCACCGCCACGACGATCGCCATACACGCACC
TATCAAGGTGACACTGTTATAGATTCGTGACGTGTATGTTGCTACTGCAG
CTCATGTTACCTCCGTCCAACCTTTAAGGGACACCAAGGGAACAGTAGGA
CACGAATATTGCCCTGCTCTACAGTTTGAAAATAGCGCAAAATCAATCGC
TGTGGTTCGCAGTCCTACAAAACTCTCTTTTTTACATGTTCATGCGCTAG
GACTGGGGCCATGTACATTATTGTCATTTTTCGCGACATGCCGTGGCATG
CCGTGGCACGACCTGCGGCAAAACTTCCACGGCATACCACGGAATCTTCC
ACGGCATACCACGGAATCTTCCACGGCATACCACGGAATCTTCCACGGAC
CCCCACGGCATACCATGGGACTCTAACCCTAACCCTAACCCTAACCCCAA
CCCTAATGCCGTGGAAGGTTTTGCCGCAGGTCGTGCCACGGCATGCCGCG
CGAAAAAAAGACAATAATGTACATCCCTGGGCGAAACTGTAGCATTGACG
CCGGTCCGCAACAAACTGACGCTATCAAACAAACGGGTAGCTGCCGGCAT
GCGCTGCTCGCTTGGGTCACAGCTGCAGCACGTTGCGTTTGTTTTTGCCT
ATGCATCTGTCCTTTTCTTCCTTCAGGCTTATGCGATTCCCATCGACATG
TTGTGGTCCACATGTCAAGCACGATGATCTTTAGCGAGTTTAATGTTCAG
CTCAATGCAGCACCCGCCGCCACCTCCCCTTCGCCGTCATTTTCCCGTCG
GGTTAATCCCCCTACAACTCCGCACAGCTGGTCGACGCCAAGCATCGTGT
ACTGTACTACCTAGGCGCAAACACCACCGAAGACCGCGCTTTATGGGTGG
AAATCCTCACGAAGGCATCACGGTTTTCGATGGGATCCGGAGAGGAGCTC
GAAGAGTTTGTGAGCAAGCGCTCCCTTGTGACGACAACGGCGGGGGGAAG
CGAGGGGGTG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig1272:15171..23080+

>mRNA_M-pyrifera_M_contig1272.5482.1 ID=mRNA_M-pyrifera_M_contig1272.5482.1|Name=mRNA_M-pyrifera_M_contig1272.5482.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1374bp|location=Sequence derived from alignment at M-pyrifera_M_contig1272:15171..23080+ (Macrocystis pyrifera P11B4 male)
ATGCCTGTTCATGTCTTCCATGGAAAGGCGGACCATATGATGCCTGTTCA
TGTCTTCCATGGAAAGGCGGACCATATGGTCCCGATAGCGGCGGTGGAGT
GGATGGCGGAGGAGATGCCTGCGTGTACGTTGTCCGTGAAGATGGGAGGG
TCCCGATAGCGGCGGTGGAGTGGATGGCGGAGGAGATGCCTGCGTGTACG
TTGTCCGTGAAGATGGGAGGTACACACGCTCTTTTAATGGATGCCGGAGT
GCTGGACTGCGTGCTGGAATTCATTTGCGAGGACTTCAAGCATTTCGAGG
AGCATGCTGCAGACCGAGCAGACGGGGAAGCCGCCGACGAGCGGTACACA
CGCTCTTTTAATGGATGCCGGAGTGCTGGACTGCGTGCTGGAATTCATTT
GCGAGGACTTCAAGCATTTCGAGGAGCATGCTGCAGACCGAGCAGACGGG
GAAGCCGCCGACGAGCGGGGACCTGCCTTAAGCTTTCCAAAACACACATT
CGACCACGCCCGGCACTTCAAGGCAACGGGCTACCTGTGCTGCCGTGAAG
GAATGCTGATGAAGGCTTGGAAGGACAGGGACCTGCCTTAAGCTTTCCAA
AACACACATTCGACCACGCCCGGCACTTCAAGGCAACGGGCTACCTGTGC
TGCCGTGAAGGAATGCTGATGAAGGCTTGGAAGGACAGGTACTTTGTCCT
TGAGGGGTTCGGGATGTACGAGTACGACGGACCAAGCAGTTCGACGGCGC
GCCGTGTTGTGGACCTTAGGGGAACAGTCGCGCATGTCCTCATGGATTCC
GCTGAAGCCCATGCTTCCGACCCTGTAAACCGGCTGTTCCCATTCAAGGT
ACTTTGTCCTTGAGGGGTTCGGGATGTACGAGTACGACGGACCAAGCAGT
TCGACGGCGCGCCGTGTTGTGGACCTTAGGGGAACAGTCGCGCATGTCCT
CATGGATTCCGCTGAAGCCCATGCTTCCGACCCTGTAAACCGGCTGTTCC
CATTCAAGCTGGTCGACGCCAAGCATCGTGTACTGTACTACCTAGGCGCA
AACACCACCGAAGACCGCGCTTTATGGGTGGAAATCCTCACGAAGGCATC
ACGGTTTTCGATGGGATCCGGAGAGGAGCTCGAAGAGTTTGTGAGCAAGC
GCTCCCTTGTGACGACAACGGCGGGGGGAAGCGAGGGGGTGCTGGTCGAC
GCCAAGCATCGTGTACTGTACTACCTAGGCGCAAACACCACCGAAGACCG
CGCTTTATGGGTGGAAATCCTCACGAAGGCATCACGGTTTTCGATGGGAT
CCGGAGAGGAGCTCGAAGAGTTTGTGAGCAAGCGCTCCCTTGTGACGACA
ACGGCGGGGGGAAGCGAGGGGGTG
back to top