mRNA_M-pyrifera_M_contig127174.5480.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig127174.5480.1 vs. uniprot
Match: A0A5A8C326_CAFRO (DNA primase n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C326_CAFRO) HSP 1 Score: 205 bits (522), Expect = 6.210e-62 Identity = 97/164 (59.15%), Postives = 114/164 (69.51%), Query Frame = 1
Query: 19 KDAFRTVERELVFDIDLTDYDEIRFCCSGAAICRRCWPYMTAAIEVLDRALLEDFGFKHRLWVYSGRRGVHCWVSDKQARALQDHGRAAVAEYLQVVAGGGEHTAKRRTVHIGPSTPP---SIKRATDQLDRIFREYILPDEGQGLLGSEHPERWEKVLEFLPD 501
K +F VEREL+FDIDLTDYDEIR CCSGA IC RCWPYMT AI V+DR L EDFGFKH WVYSGRRGVHCWV D+ ARAL + GR+A+ EY + G T ++ + P T P S+KRA L+ +F E I+P+ GQGLL ERWE VL F+PD
Sbjct: 34 KGSFLPVERELIFDIDLTDYDEIRTCCSGAGICHRCWPYMTVAIRVIDRGLREDFGFKHIFWVYSGRRGVHCWVCDRSARALGNDGRSAIVEYFSAING----TMEKNAADLVPLTVPLHPSLKRALGDLETMFIENIIPESGQGLLADGQTERWESVLAFVPD 193
BLAST of mRNA_M-pyrifera_M_contig127174.5480.1 vs. uniprot
Match: A0A5A8CL85_CAFRO (DNA primase n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CL85_CAFRO) HSP 1 Score: 207 bits (527), Expect = 7.400e-62 Identity = 98/165 (59.39%), Postives = 115/165 (69.70%), Query Frame = 1
Query: 16 KKDAFRTVERELVFDIDLTDYDEIRFCCSGAAICRRCWPYMTAAIEVLDRALLEDFGFKHRLWVYSGRRGVHCWVSDKQARALQDHGRAAVAEYLQVVAGGGEHTAKRRTVHIGPSTPP---SIKRATDQLDRIFREYILPDEGQGLLGSEHPERWEKVLEFLPD 501
KK +F VEREL+FDIDLTDYDEIR CCSGA IC RCWPYMT AI V+DR L EDFGFKH WVYSGRRGVHCWV D+ ARAL + GR+A+ EY + G T ++ + P T P S+KRA L+ +F E I+P+ GQGLL ERWE VL F+PD
Sbjct: 148 KKGSFLPVERELIFDIDLTDYDEIRTCCSGAGICHRCWPYMTVAIRVIDRGLREDFGFKHIFWVYSGRRGVHCWVCDRSARALGNDGRSAIVEYFSAING----TMEKNAADLVPLTVPLHPSLKRALGDLETMFIENIIPESGQGLLADGQTERWESVLAFVPD 308
BLAST of mRNA_M-pyrifera_M_contig127174.5480.1 vs. uniprot
Match: A0A7S1CRX4_9STRA (DNA primase (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CRX4_9STRA) HSP 1 Score: 199 bits (505), Expect = 5.250e-59 Identity = 91/167 (54.49%), Postives = 119/167 (71.26%), Query Frame = 1
Query: 1 KHTTMKKDAFRTVERELVFDIDLTDYDEIRFCCSGAAICRRCWPYMTAAIEVLDRALLEDFGFKHRLWVYSGRRGVHCWVSDKQARALQDHGRAAVAEYLQVVAGGGEHTAKRRTVHIGPSTPPSIKRATDQLDRIFREYILPDEGQGLLGSEHPERWEKVLEFLPD 501
KH T+KKDAF+ V+RELVFDIDLTDYD++R CCSGA IC +CW YM AI+VLD L EDFGFK+ L++YSGRRGVHCWV D+ AR L +H R AV +Y V+GG +H +K T + P +RA +L+ F E+++ +GQG+L S+ E W KVL+ +PD
Sbjct: 142 KHNTVKKDAFKPVQRELVFDIDLTDYDDVRTCCSGATICNKCWQYMNVAIKVLDVGLREDFGFKNILFIYSGRRGVHCWVCDESARTLSNHERTAVVDYFSAVSGGSDHGSK--TAAVTSPLVPCFERAFAELEAFFTEWVITKKGQGILESD--EHWGKVLDMVPD 304
BLAST of mRNA_M-pyrifera_M_contig127174.5480.1 vs. uniprot
Match: D7G7Y8_ECTSI (DNA primase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Y8_ECTSI) HSP 1 Score: 199 bits (506), Expect = 7.160e-59 Identity = 94/166 (56.63%), Postives = 118/166 (71.08%), Query Frame = 1
Query: 4 HTTMKKDAFRTVERELVFDIDLTDYDEIRFCCSGAAICRRCWPYMTAAIEVLDRALLEDFGFKHRLWVYSGRRGVHCWVSDKQARALQDHGRAAVAEYLQVVAGGGEHTAKRRTVHIGPSTPPSIKRATDQLDRIFREYILPDEGQGLLGSEHPERWEKVLEFLPD 501
H +K AF+ VERELVFDIDLTDYD++R CCSGA IC RCW YMT A+EV+D L +DFGFKH LWVYSGRRGVHCWV+D ARAL + GR AVA+Y VVAG + K V++ PS++RA + L+ +F E+I+ +EGQGLL P W K+L +P+
Sbjct: 141 HLAVKPGAFQPVERELVFDIDLTDYDDVRTCCSGAKICNRCWSYMTMAVEVMDVGLRQDFGFKHILWVYSGRRGVHCWVADDAARALTNEGRGAVADYFGVVAGNDNQSKK---VNVSLPIHPSLRRAYETLEPLFLEHIITEEGQGLLSD--PSHWGKLLATVPE 301
BLAST of mRNA_M-pyrifera_M_contig127174.5480.1 vs. uniprot
Match: A0A2C9K7U8_BIOGL (DNA primase n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9K7U8_BIOGL) HSP 1 Score: 189 bits (480), Expect = 4.890e-56 Identity = 90/163 (55.21%), Postives = 115/163 (70.55%), Query Frame = 1
Query: 10 TMKKDAFRTVERELVFDIDLTDYDEIRFCCSGAAICRRCWPYMTAAIEVLDRALLEDFGFKHRLWVYSGRRGVHCWVSDKQARALQDHGRAAVAEYLQVVAGGGEHTAKRRTVHIGPSTPPSIKRATDQLDRIFREYILPDEGQGLLGSEHPERWEKVLEFLP 498
T+K AF E+ELVFDID+TDYD++RFCCSGA ICR CWP M A+++LDRAL EDFGF+H LWVYSGRRG+HCWV D+ AR L GR+A+AEYL +V GG T R+ + + PSI+ A D + + F EYI+ Q LLG E E+W+KV+ +P
Sbjct: 64 TIKSTAFLAQEKELVFDIDMTDYDDVRFCCSGADICRNCWPLMIMAVKILDRALREDFGFQHILWVYSGRRGIHCWVCDETARTLSAQGRSAIAEYLTLVKGG--ETVSRKVI-LPDKLHPSIRHAVDIISKYFLEYIVKK--QDLLGDE--EKWKKVIAMIP 219
BLAST of mRNA_M-pyrifera_M_contig127174.5480.1 vs. uniprot
Match: A0A4P9XM36_9FUNG (DNA primase small subunit (Fragment) n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XM36_9FUNG) HSP 1 Score: 184 bits (467), Expect = 9.420e-56 Identity = 87/159 (54.72%), Postives = 115/159 (72.33%), Query Frame = 1
Query: 25 AFRTVERELVFDIDLTDYDEIRFCCSGAAICRRCWPYMTAAIEVLDRALLEDFGFKHRLWVYSGRRGVHCWVSDKQARALQDHGRAAVAEYLQVVAGGGEHTAKRRTVHIGPSTPPSIKRATDQLDRIFREYILPDEGQGLLGSEHPERWEKVLEFLPD 501
FR +E+ELVFDID+TDYDE+R CCSG IC +CW +MT AI++LDRAL EDFGFKH LWVYSGRRGVHCWV D +AR L + GR A+ +L+V+ GG + + R V++ P +++RA ++ F E IL + Q +LG+ PERW+KVLE +PD
Sbjct: 87 VFRPLEKELVFDIDMTDYDEVRSCCSGGDICLQCWDFMTIAIKILDRALREDFGFKHLLWVYSGRRGVHCWVCDPRARRLTNEGRKAIIGWLEVIKGGAQ---RARKVNLPQVLPVALQRAESIMNDYFEESIL--DKQEILGT--PERWQKVLEIIPD 238
BLAST of mRNA_M-pyrifera_M_contig127174.5480.1 vs. uniprot
Match: V9KXR3_CALMI (DNA primase n=5 Tax=Callorhinchus milii TaxID=7868 RepID=V9KXR3_CALMI) HSP 1 Score: 189 bits (479), Expect = 1.740e-55 Identity = 96/167 (57.49%), Postives = 117/167 (70.06%), Query Frame = 1
Query: 1 KHTTMKKDAFRTVERELVFDIDLTDYDEIRFCCSGAAICRRCWPYMTAAIEVLDRALLEDFGFKHRLWVYSGRRGVHCWVSDKQARALQDHGRAAVAEYLQVVAGGGEHTAKRRTVHIGPSTPPSIKRATDQLDRIFREYILPDEGQGLLGSEHPERWEKVLEFLPD 501
+H ++K F+ +E+ELVFDID+TDYD++R CC A IC +CW MT AI VLDRAL EDFGF+HRLWVYSGRRGVHCWV D AR L R+AVAEYL VV GGE T K+ VH+ PSI++A + R FREY L E Q +LGS+ E WEKVL +P+
Sbjct: 92 QHNSVKAGNFQALEKELVFDIDMTDYDDVRNCCRAADICHKCWTLMTIAIRVLDRALEEDFGFEHRLWVYSGRRGVHCWVCDDIARKLSQTARSAVAEYLSVVK-GGEDTIKK--VHLTHPIHPSIEKAIVLVKRYFREYAL--ENQDILGSK--EAWEKVLAMVPE 251
BLAST of mRNA_M-pyrifera_M_contig127174.5480.1 vs. uniprot
Match: A0A7S2XXV5_9STRA (DNA primase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXV5_9STRA) HSP 1 Score: 186 bits (472), Expect = 3.490e-55 Identity = 91/166 (54.82%), Postives = 117/166 (70.48%), Query Frame = 1
Query: 4 HTTMKKDAFRTVERELVFDIDLTDYDEIRFCCSGAAICRRCWPYMTAAIEVLDRALLEDFGFKHRLWVYSGRRGVHCWVSDKQARALQDHGRAAVAEYLQVVAGGGEHTAKRRTVHIGPSTPPSIKRATDQLDRIFREYILPDEGQGLLGSEHPERWEKVLEFLPD 501
H T+K +F+ VERELVFDIDLTDYD+IR CCSGA IC +CW +MT AI VLD AL +DFGF+ +WVYSGRRGVHCWVSD ARAL + R AV EYL VV+ E+ K+ V + PS+ RA + L +F ++I+ +EGQGL+ S + WEK+L +P+
Sbjct: 87 HATVKGGSFKPVERELVFDIDLTDYDDIRTCCSGAGICGKCWQFMTMAIRVLDSALRDDFGFRQVVWVYSGRRGVHCWVSDPTARALPNEARQAVVEYLSVVS-ANENKGKK--VDLSWPLHPSLMRAYEALLPLFEQHIITEEGQGLMASS--DGWEKILNTVPN 247
BLAST of mRNA_M-pyrifera_M_contig127174.5480.1 vs. uniprot
Match: UPI001125F219 (DNA primase small subunit isoform X1 n=2 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI001125F219) HSP 1 Score: 188 bits (477), Expect = 3.890e-55 Identity = 93/167 (55.69%), Postives = 113/167 (67.66%), Query Frame = 1
Query: 1 KHTTMKKDAFRTVERELVFDIDLTDYDEIRFCCSGAAICRRCWPYMTAAIEVLDRALLEDFGFKHRLWVYSGRRGVHCWVSDKQARALQDHGRAAVAEYLQVVAGGGEHTAKRRTVHIGPSTPPSIKRATDQLDRIFREYILPDEGQGLLGSEHPERWEKVLEFLPD 501
+H T+K AF+ E+ELVFDID+TDYD++R CCS A IC +CW MT AI +LDRAL EDFGF+HRLWVYSGRRGVHCWV DK AR L R+AVAEYL +V GG E K V + P I+++ ++ F EY L GQ +LGS+ E W KVL LPD
Sbjct: 90 QHNTLKSGAFQAQEKELVFDIDMTDYDDVRKCCSSADICPKCWTLMTIAIRILDRALKEDFGFEHRLWVYSGRRGVHCWVCDKSARQLSQAARSAVAEYLSLVKGGEEVIKK---VQLSDPIHPFIRKSLKVVEDYFEEYALV--GQDILGSK--ESWSKVLALLPD 249
BLAST of mRNA_M-pyrifera_M_contig127174.5480.1 vs. uniprot
Match: UPI0018F48D00 (DNA primase small subunit isoform X1 n=2 Tax=Scyliorhinus canicula TaxID=7830 RepID=UPI0018F48D00) HSP 1 Score: 188 bits (478), Expect = 4.360e-55 Identity = 91/167 (54.49%), Postives = 115/167 (68.86%), Query Frame = 1
Query: 1 KHTTMKKDAFRTVERELVFDIDLTDYDEIRFCCSGAAICRRCWPYMTAAIEVLDRALLEDFGFKHRLWVYSGRRGVHCWVSDKQARALQDHGRAAVAEYLQVVAGGGEHTAKRRTVHIGPSTPPSIKRATDQLDRIFREYILPDEGQGLLGSEHPERWEKVLEFLPD 501
+H ++K +F +ELVFDID+TDYD++R CCS A ICR+CW MT AI++LDRAL EDFGF+HRLWVYSGRRGVHCWV DK AR L R+AVAEYL VV GG E K VH+ PSI++A +D F +Y + + Q + GS+ E W+KVL +PD
Sbjct: 119 QHNSVKSGSFHAESKELVFDIDMTDYDDVRTCCSSADICRKCWTLMTIAIKILDRALGEDFGFRHRLWVYSGRRGVHCWVCDKNARNLSQAARSAVAEYLSVVKGGTEAIKK---VHLTNPIHPSIQQAITVIDSYFEDYAVNE--QDIFGSK--ETWQKVLALIPD 278 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127174.5480.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig127174.5480.1 >prot_M-pyrifera_M_contig127174.5480.1 ID=prot_M-pyrifera_M_contig127174.5480.1|Name=mRNA_M-pyrifera_M_contig127174.5480.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=163bp MKKDAFRTVERELVFDIDLTDYDEIRFCCSGAAICRRCWPYMTAAIEVLDback to top mRNA from alignment at M-pyrifera_M_contig127174:7..507- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig127174.5480.1 ID=mRNA_M-pyrifera_M_contig127174.5480.1|Name=mRNA_M-pyrifera_M_contig127174.5480.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=501bp|location=Sequence derived from alignment at M-pyrifera_M_contig127174:7..507- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig127174:7..507- >mRNA_M-pyrifera_M_contig127174.5480.1 ID=mRNA_M-pyrifera_M_contig127174.5480.1|Name=mRNA_M-pyrifera_M_contig127174.5480.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=978bp|location=Sequence derived from alignment at M-pyrifera_M_contig127174:7..507- (Macrocystis pyrifera P11B4 male)back to top |