mRNA_M-pyrifera_M_contig127147.5472.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig127147.5472.1 vs. uniprot
Match: A0A8H7SBT8_9FUNG (Ribonucloprotein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7SBT8_9FUNG) HSP 1 Score: 133 bits (335), Expect = 1.530e-37 Identity = 65/109 (59.63%), Postives = 87/109 (79.82%), Query Frame = 1
Query: 10 EGVKYVSPIAFPMAQRALQAKLLKLVTKGVESKTLRRGVKEVVKALRRGPGKGLVVIAGDMYPMDVISHIPVFCEEHSVPYVFVPSRDELGKAARCKRPTSVVLITHGG 336
+ +K++SPIA P+A++ L KL K V K + K +RRGVKEV KA+R+G KGLVVIAGD+ PMDVISH+PV CE+H +PYVFVPS+++LG+A++ KRPTSV +I GG
Sbjct: 25 DSLKFLSPIAHPLAEKKLSKKLFKTVKKASKVKHIRRGVKEVGKAVRKGE-KGLVVIAGDISPMDVISHLPVLCEDHDIPYVFVPSKEKLGEASQTKRPTSVAMIVFGG 132
BLAST of mRNA_M-pyrifera_M_contig127147.5472.1 vs. uniprot
Match: A0A8H7BM87_9FUNG (Ribonucloprotein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BM87_9FUNG) HSP 1 Score: 130 bits (328), Expect = 1.350e-36 Identity = 64/114 (56.14%), Postives = 86/114 (75.44%), Query Frame = 1
Query: 1 GAGEGVKYVSPIAFPMAQRALQAKLLKLVTKGVESKTLRRGVKEVVKALRRGPGKGLVVIAGDMYPMDVISHIPVFCEEHSVPYVFVPSRDELGKAARCKRPTSVVLITHGGSR 342
G +++VSPIA P+A++ L KL K K + K +RRGVKEV K+LR+G KGLV+IAGD+ P+DVISH+PV CE+H+VPY+FVPS++ELG+A KRPTSV +I GG +
Sbjct: 18 GESSVIRHVSPIAHPLAEKKLTKKLFKTAKKASKVKHVRRGVKEVAKSLRKGE-KGLVIIAGDISPIDVISHMPVLCEDHNVPYIFVPSKEELGEAVATKRPTSVAMIVLGGKQ 130
BLAST of mRNA_M-pyrifera_M_contig127147.5472.1 vs. uniprot
Match: A0A1X2I8D8_9FUNG (Ribonucloprotein n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2I8D8_9FUNG) HSP 1 Score: 127 bits (320), Expect = 2.340e-35 Identity = 64/109 (58.72%), Postives = 85/109 (77.98%), Query Frame = 1
Query: 16 VKYVSPIAFPMAQRALQAKLLKLVTKGVESKTLRRGVKEVVKALRRGPGKGLVVIAGDMYPMDVISHIPVFCEEHSVPYVFVPSRDELGKAARCKRPTSVVLITHGGSR 342
V++ SPIA PMA+ L K+ K V K ++K +RRGVKEV KALR+G KGLVVIAGD+ P+DVI+H+PV CE+ +VPYVFVPS+++LG+AA KRPTSV ++ GG +
Sbjct: 25 VRFASPIAHPMAEEKLAKKIQKTVKKASKAKHVRRGVKEVGKALRKGE-KGLVVIAGDISPIDVIAHLPVLCEDSNVPYVFVPSKEQLGEAASTKRPTSVTMVVLGGQK 132
BLAST of mRNA_M-pyrifera_M_contig127147.5472.1 vs. uniprot
Match: A0A1X2G374_9FUNG (Ribonucloprotein n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2G374_9FUNG) HSP 1 Score: 126 bits (317), Expect = 9.150e-35 Identity = 65/109 (59.63%), Postives = 81/109 (74.31%), Query Frame = 1
Query: 16 VKYVSPIAFPMAQRALQAKLLKLVTKGVESKTLRRGVKEVVKALRRGPGKGLVVIAGDMYPMDVISHIPVFCEEHSVPYVFVPSRDELGKAARCKRPTSVVLITHGGSR 342
V YVSPIA PMA + KL K V K ++K + RGVKEV KAL +G KGLVVIAGD+ PMDVI+H+PV CE+H VPYVFVPS+++LG+A KRPTSV ++ GG +
Sbjct: 25 VYYVSPIAHPMADDKMSKKLFKTVKKASKAKHVCRGVKEVAKALSKGE-KGLVVIAGDISPMDVIAHMPVLCEDHDVPYVFVPSKEQLGEACATKRPTSVSMVVLGGKK 132
BLAST of mRNA_M-pyrifera_M_contig127147.5472.1 vs. uniprot
Match: A0A1X2IHZ4_9FUNG (Ribonucloprotein n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IHZ4_9FUNG) HSP 1 Score: 125 bits (313), Expect = 2.400e-34 Identity = 62/109 (56.88%), Postives = 85/109 (77.98%), Query Frame = 1
Query: 16 VKYVSPIAFPMAQRALQAKLLKLVTKGVESKTLRRGVKEVVKALRRGPGKGLVVIAGDMYPMDVISHIPVFCEEHSVPYVFVPSRDELGKAARCKRPTSVVLITHGGSR 342
V++ SPIA PMA+ L K+ K + K ++K +RRGVKEV KALR+G KGLVVIAGD+ P+DVI+H+PV CE+ +VPYVFVPS+++LG++A KRPTSV ++ GG +
Sbjct: 22 VRFASPIAHPMAEDKLTKKIHKTIKKASKAKHVRRGVKEVGKALRKGE-KGLVVIAGDISPIDVIAHLPVLCEDSNVPYVFVPSKEQLGESASTKRPTSVTMVVLGGQK 129
BLAST of mRNA_M-pyrifera_M_contig127147.5472.1 vs. uniprot
Match: A0A0W0DF42_CANGB (Ribonucloprotein n=2 Tax=Candida glabrata TaxID=5478 RepID=A0A0W0DF42_CANGB) HSP 1 Score: 124 bits (311), Expect = 3.720e-34 Identity = 63/106 (59.43%), Postives = 79/106 (74.53%), Query Frame = 1
Query: 25 VSPIAFPMAQRALQAKLLKLVTKGVESKTLRRGVKEVVKALRRGPGKGLVVIAGDMYPMDVISHIPVFCEEHSVPYVFVPSRDELGKAARCKRPTSVVLITHGGSR 342
V P A P+A + L K+LK V K +K ++RGVKEVVKALR+G KGLVVIAGD+ P DVISHIPV CE+H VPY+FVPS+ +LG A+ KRPTSV+ I G ++
Sbjct: 21 VLPFAKPLASKKLNKKVLKTVKKASRAKNVKRGVKEVVKALRKGE-KGLVVIAGDISPADVISHIPVLCEDHGVPYLFVPSKQDLGSASATKRPTSVIFIVPGSNK 125
BLAST of mRNA_M-pyrifera_M_contig127147.5472.1 vs. uniprot
Match: H2AVN2_KAZAF (Ribonucloprotein n=1 Tax=Kazachstania africana (strain ATCC 22294 / BCRC 22015 / CBS 2517 / CECT 1963 / NBRC 1671 / NRRL Y-8276) TaxID=1071382 RepID=H2AVN2_KAZAF) HSP 1 Score: 124 bits (311), Expect = 3.940e-34 Identity = 63/106 (59.43%), Postives = 80/106 (75.47%), Query Frame = 1
Query: 25 VSPIAFPMAQRALQAKLLKLVTKGVESKTLRRGVKEVVKALRRGPGKGLVVIAGDMYPMDVISHIPVFCEEHSVPYVFVPSRDELGKAARCKRPTSVVLITHGGSR 342
V A P+A + L K+LK V K ++K ++RGV+EVVKALR+G KGLVVIAGD++P DVISH+PV CE+HSVPYVFVPS+ +LG A KRPTSVV I G ++
Sbjct: 21 VIEFAKPLASKKLNKKVLKTVKKASKAKNVKRGVREVVKALRKGD-KGLVVIAGDIFPYDVISHLPVLCEDHSVPYVFVPSKQDLGSAGATKRPTSVVFIVPGSNK 125
BLAST of mRNA_M-pyrifera_M_contig127147.5472.1 vs. uniprot
Match: A0A168T3L2_ABSGL (Ribonucloprotein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168T3L2_ABSGL) HSP 1 Score: 124 bits (311), Expect = 4.830e-34 Identity = 63/111 (56.76%), Postives = 84/111 (75.68%), Query Frame = 1
Query: 10 EGVKYVSPIAFPMAQRALQAKLLKLVTKGVESKTLRRGVKEVVKALRRGPGKGLVVIAGDMYPMDVISHIPVFCEEHSVPYVFVPSRDELGKAARCKRPTSVVLITHGGSR 342
E ++ SPIA PMA+ L K+ K V K ++K +RRGVKEV KALR+G KGLVVIAGD+ P+DVI+H+PV CE+ +VPYVFVPS++ LG+A+ KRPTSV ++ GG +
Sbjct: 19 EVARFASPIAHPMAEDKLSKKIHKTVKKASKAKHVRRGVKEVGKALRKGE-KGLVVIAGDISPIDVIAHLPVLCEDSNVPYVFVPSKENLGEASATKRPTSVTMVVLGGQK 128
BLAST of mRNA_M-pyrifera_M_contig127147.5472.1 vs. uniprot
Match: A0A2T0FJF4_9ASCO (Ribonucloprotein n=1 Tax=Wickerhamiella sorbophila TaxID=45607 RepID=A0A2T0FJF4_9ASCO) HSP 1 Score: 124 bits (310), Expect = 4.830e-34 Identity = 60/106 (56.60%), Postives = 82/106 (77.36%), Query Frame = 1
Query: 25 VSPIAFPMAQRALQAKLLKLVTKGVESKTLRRGVKEVVKALRRGPGKGLVVIAGDMYPMDVISHIPVFCEEHSVPYVFVPSRDELGKAARCKRPTSVVLITHGGSR 342
V P + P+A + L K+LK + K ++K +RGVKEVVK+LR+G KGLV+IAGD++P DVISHIPV CE++ VPYVFVPS+++LG A KRPTS V++T GG++
Sbjct: 16 VLPFSHPLASKKLNKKVLKTIKKASKAKIAKRGVKEVVKSLRKGD-KGLVIIAGDIWPADVISHIPVLCEDNKVPYVFVPSKEDLGHAGSTKRPTSCVMVTPGGAQ 120
BLAST of mRNA_M-pyrifera_M_contig127147.5472.1 vs. uniprot
Match: A0A367KXK1_RHIST (Ribonucloprotein n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367KXK1_RHIST) HSP 1 Score: 124 bits (310), Expect = 6.840e-34 Identity = 63/112 (56.25%), Postives = 83/112 (74.11%), Query Frame = 1
Query: 1 GAGEGVKYVSPIAFPMAQRALQAKLLKLVTKGVESKTLRRGVKEVVKALRRGPGKGLVVIAGDMYPMDVISHIPVFCEEHSVPYVFVPSRDELGKAARCKRPTSVVLITHGG 336
G+ E + SPIA P+A L KL K V K + K +RRGVKEV KALR+G KGLV+IAGD+ P+DVISH+PV CE+ +VPY+FVPS+++LG+A+ KRPTSV ++ GG
Sbjct: 16 GSTEVPYFQSPIAHPLADDKLTKKLFKTVKKASKVKHVRRGVKEVAKALRKGE-KGLVIIAGDISPLDVISHMPVLCEDSNVPYIFVPSKEQLGEASSTKRPTSVTMVVFGG 126 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127147.5472.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig127147.5472.1 >prot_M-pyrifera_M_contig127147.5472.1 ID=prot_M-pyrifera_M_contig127147.5472.1|Name=mRNA_M-pyrifera_M_contig127147.5472.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=114bp GAGEGVKYVSPIAFPMAQRALQAKLLKLVTKGVESKTLRRGVKEVVKALRback to top mRNA from alignment at M-pyrifera_M_contig127147:141..482- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig127147.5472.1 ID=mRNA_M-pyrifera_M_contig127147.5472.1|Name=mRNA_M-pyrifera_M_contig127147.5472.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=342bp|location=Sequence derived from alignment at M-pyrifera_M_contig127147:141..482- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig127147:141..482- >mRNA_M-pyrifera_M_contig127147.5472.1 ID=mRNA_M-pyrifera_M_contig127147.5472.1|Name=mRNA_M-pyrifera_M_contig127147.5472.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=684bp|location=Sequence derived from alignment at M-pyrifera_M_contig127147:141..482- (Macrocystis pyrifera P11B4 male)back to top |