mRNA_M-pyrifera_M_contig127140.5471.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig127140.5471.1 vs. uniprot
Match: A0A812JYY3_9DINO (Phosphodiesterase n=3 Tax=Sar TaxID=2698737 RepID=A0A812JYY3_9DINO) HSP 1 Score: 138 bits (347), Expect = 7.680e-36 Identity = 59/95 (62.11%), Postives = 75/95 (78.95%), Query Frame = 1
Query: 1 AWRRIWGAKIQWPADMPDDMLRMAIDVSKEKIGAVEDWQADGDKAVEEIKAAFDKAYGSPWHVVVGKHFGSLATHESRRFCFFYLDDKAVMIYKS 285
AWR +WGAK+ WPADMPDDMLRMA++ SK +I + DWQADGD AV ++ F++ +G WH V+GKHFGSL THESRR CFFY DKAV+++K+
Sbjct: 1160 AWRTMWGAKVLWPADMPDDMLRMAVEQSKLEIDKITDWQADGDAAVAAVRDKFNETFGRHWHCVMGKHFGSLVTHESRRMCFFYYGDKAVLLFKA 1254
BLAST of mRNA_M-pyrifera_M_contig127140.5471.1 vs. uniprot
Match: A0A7S1CI82_9STRA (Dynein light chain n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CI82_9STRA) HSP 1 Score: 121 bits (303), Expect = 8.310e-34 Identity = 47/94 (50.00%), Postives = 73/94 (77.66%), Query Frame = 1
Query: 4 WRRIWGAKIQWPADMPDDMLRMAIDVSKEKIGAVEDWQADGDKAVEEIKAAFDKAYGSPWHVVVGKHFGSLATHESRRFCFFYLDDKAVMIYKS 285
W+ +WGAK++WP+D+PDDML AI V++ + +EDW+++GD V+++K FD+ +G WH VVG +FGS THE+RRF +FY+ DKAV+++K+
Sbjct: 9 WKHMWGAKVKWPSDLPDDMLEDAITVTRAALEGIEDWESEGDAVVDKLKKTFDEKWGPHWHAVVGTNFGSFVTHEARRFVYFYVADKAVLLFKA 102
BLAST of mRNA_M-pyrifera_M_contig127140.5471.1 vs. uniprot
Match: A0A7S2W886_9STRA (Dynein light chain n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W886_9STRA) HSP 1 Score: 112 bits (279), Expect = 3.640e-30 Identity = 49/94 (52.13%), Postives = 69/94 (73.40%), Query Frame = 1
Query: 4 WRRIWGAKIQWPADMPDDMLRMAIDVSKEKIGAVEDWQADGDKAVEEIKAAFDKAYGSPWHVVVGKHFGSLATHESRRFCFFYLDDKAVMIYKS 285
W+ +WGAK++ P D+PDDML+ AI S+ IG D++A+G E+IK FD+ + WHV++GK+FGS THE++RF +FY DDKAVMIYK+
Sbjct: 8 WQMMWGAKVKTPVDVPDDMLKDAILTSQRLIGEATDFEAEGVDVAEKIKREFDERWTPYWHVIIGKNFGSFVTHETKRFLYFYFDDKAVMIYKA 101
BLAST of mRNA_M-pyrifera_M_contig127140.5471.1 vs. uniprot
Match: A0A836CJA1_9STRA (Dynein light chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJA1_9STRA) HSP 1 Score: 108 bits (271), Expect = 6.000e-29 Identity = 47/94 (50.00%), Postives = 69/94 (73.40%), Query Frame = 1
Query: 4 WRRIWGAKIQWPADMPDDMLRMAIDVSKEKIGAVEDWQADGDKAVEEIKAAFDKAYGSPWHVVVGKHFGSLATHESRRFCFFYLDDKAVMIYKS 285
WR +WGAK++ P DMPDD+L+ AID S+E + D++A+G + E+IK D+ + WHVV+G++FGS THE+R F +FY+ DKAVM+YK+
Sbjct: 8 WRMMWGAKVKLPLDMPDDILKDAIDTSREVLDKCHDFEAEGLASAEKIKRHLDEQWDPHWHVVIGRNFGSFVTHETRMFLYFYIGDKAVMMYKA 101
BLAST of mRNA_M-pyrifera_M_contig127140.5471.1 vs. uniprot
Match: A0A7S1TPD3_9STRA (Dynein light chain n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TPD3_9STRA) HSP 1 Score: 103 bits (258), Expect = 5.860e-27 Identity = 47/94 (50.00%), Postives = 66/94 (70.21%), Query Frame = 1
Query: 4 WRRIWGAKIQWPADMPDDMLRMAIDVSKEKIGAVEDWQADGDKAVEEIKAAFDKAYGSPWHVVVGKHFGSLATHESRRFCFFYLDDKAVMIYKS 285
W +WGA+++ P DM DDML+ A++ ++ D++ DG KA E IK AFD+ + WHVVVG+ FGS THE++ F +FYLDDKAVM+YK+
Sbjct: 9 WSTMWGARVKVPCDMGDDMLKDAVETTRSVFEEFPDFENDGLKAAEAIKLAFDEKWTPNWHVVVGRGFGSFVTHETKCFVYFYLDDKAVMMYKA 102
BLAST of mRNA_M-pyrifera_M_contig127140.5471.1 vs. uniprot
Match: D7G1V9_ECTSI (Dynein light chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V9_ECTSI) HSP 1 Score: 102 bits (253), Expect = 3.280e-26 Identity = 44/94 (46.81%), Postives = 66/94 (70.21%), Query Frame = 1
Query: 4 WRRIWGAKIQWPADMPDDMLRMAIDVSKEKIGAVEDWQADGDKAVEEIKAAFDKAYGSPWHVVVGKHFGSLATHESRRFCFFYLDDKAVMIYKS 285
W ++WGAK++ P DM DDMLR AI+ ++ + D++A+G A E+IK FD + WHV++G++FGS THE+ F +FYL DKA+M+YK+
Sbjct: 8 WAQMWGAKVKMPTDMRDDMLRDAIETCRDALDHCADFEAEGLAAAEKIKKHFDARWDPSWHVIIGRNFGSFVTHETTCFVYFYLADKAIMMYKA 101
BLAST of mRNA_M-pyrifera_M_contig127140.5471.1 vs. uniprot
Match: A0A7S3HH61_9STRA (Dynein light chain n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HH61_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 4.920e-24 Identity = 41/94 (43.62%), Postives = 65/94 (69.15%), Query Frame = 1
Query: 4 WRRIWGAKIQWPADMPDDMLRMAIDVSKEKIGAVEDWQADGDKAVEEIKAAFDKAYGSPWHVVVGKHFGSLATHESRRFCFFYLDDKAVMIYKS 285
++ +WGA+I WPAD+PD+M ++A++ +++ + + +G K E++K FD+ YG WHV VGK+FG A HE +RF +FY+D A MIYK+
Sbjct: 37 YKTLWGARILWPADIPDNMCQVAVEQAQKALEEAGKQEKEGQKVAEKLKKHFDENYGPYWHVTVGKNFGCHAVHEKQRFVYFYIDQFAFMIYKA 130
BLAST of mRNA_M-pyrifera_M_contig127140.5471.1 vs. uniprot
Match: A0A7S2WLS4_9STRA (Dynein light chain n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WLS4_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 1.890e-23 Identity = 42/93 (45.16%), Postives = 65/93 (69.89%), Query Frame = 1
Query: 4 WRRIWGAKIQWPADMPDDMLRMAIDVSKEKIGAVEDWQADGDKAVEEIKAAFDKAYGSPWHVVVGKHFGSLATHESRRFCFFYLDDKAVMIYK 282
W+ IWGAK++ P +MPDD+L+ AI ++ A E+++++G+ AV+ IK D + W +G++FGS +HE+RRF FFY +DKAVM+YK
Sbjct: 10 WQTIWGAKVKTPVEMPDDILKDAITTVTNELAACENFESNGNLAVQNIKDHMDHKWSPHWCCFIGRNFGSKVSHETRRFVFFYHNDKAVMLYK 102
BLAST of mRNA_M-pyrifera_M_contig127140.5471.1 vs. uniprot
Match: A0A813FD47_POLGL (Dynein light chain n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FD47_POLGL) HSP 1 Score: 94.4 bits (233), Expect = 8.230e-23 Identity = 46/97 (47.42%), Postives = 64/97 (65.98%), Query Frame = 1
Query: 4 WRRIWGAKIQWPADMPDDMLRMAIDVSKEKIGAVEDW---QADGDKAVEEIKAAFDKAYGSPWHVVVGKHFGSLATHESRRFCFFYLDDKAVMIYKS 285
++ +WGA+I WP D+PDDML A+ K + A+E++ +A G K E+IK AFD+ Y WHV VGK+FG HE +RF +FY+D A MIYK+
Sbjct: 38 YKSLWGARILWPPDLPDDMLEDAV---KTSLAALEEFGKNEAQGPKISEKIKKAFDEKYKPYWHVTVGKNFGCHTVHEKQRFVYFYVDQFAFMIYKA 131
BLAST of mRNA_M-pyrifera_M_contig127140.5471.1 vs. uniprot
Match: A0A7S1VZS4_ALECA (Dynein light chain n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1VZS4_ALECA) HSP 1 Score: 93.6 bits (231), Expect = 1.790e-22 Identity = 41/94 (43.62%), Postives = 60/94 (63.83%), Query Frame = 1
Query: 4 WRRIWGAKIQWPADMPDDMLRMAIDVSKEKIGAVEDWQADGDKAVEEIKAAFDKAYGSPWHVVVGKHFGSLATHESRRFCFFYLDDKAVMIYKS 285
++ +WGA+++WPAD+PD+ML A+ S + +G K E+IK FD+ +G WH VGK+FG A HE +RF +FY+D A MIYK+
Sbjct: 41 YKTLWGARVRWPADLPDNMLEDAVKTSTAAFEEFGKLEREGQKMAEKIKKHFDENWGPYWHATVGKNFGCHAVHEKQRFVYFYIDQFAFMIYKA 134 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127140.5471.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig127140.5471.1 >prot_M-pyrifera_M_contig127140.5471.1 ID=prot_M-pyrifera_M_contig127140.5471.1|Name=mRNA_M-pyrifera_M_contig127140.5471.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=97bp AWRRIWGAKIQWPADMPDDMLRMAIDVSKEKIGAVEDWQADGDKAVEEIKback to top mRNA from alignment at M-pyrifera_M_contig127140:63..353- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig127140.5471.1 ID=mRNA_M-pyrifera_M_contig127140.5471.1|Name=mRNA_M-pyrifera_M_contig127140.5471.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=291bp|location=Sequence derived from alignment at M-pyrifera_M_contig127140:63..353- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig127140:63..353- >mRNA_M-pyrifera_M_contig127140.5471.1 ID=mRNA_M-pyrifera_M_contig127140.5471.1|Name=mRNA_M-pyrifera_M_contig127140.5471.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=582bp|location=Sequence derived from alignment at M-pyrifera_M_contig127140:63..353- (Macrocystis pyrifera P11B4 male)back to top |