mRNA_M-pyrifera_M_contig127134.5470.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig127134.5470.1 vs. uniprot
Match: A0A7V8V5L0_9BACT (Uncharacterized protein n=1 Tax=Bremerella alba TaxID=980252 RepID=A0A7V8V5L0_9BACT) HSP 1 Score: 317 bits (811), Expect = 1.720e-100 Identity = 167/168 (99.40%), Postives = 167/168 (99.40%), Query Frame = 1
Query: 1 VSFEELAQLNDHEVVKYFAKLGDIIPTEAINEMEPLSLMTTPVVLPKSNQLIITDTAKNLRSALQILESMQEPQGEEATIRRFDLKHADAATVLLVAATHLGIPENETSGIDITITTDTTGKRLYAVGSEEKLKRLDSLIQVVDVPENTEETSFEKTLVSHSLKGDNL 504
VSFEELAQLNDHEVVKYFAKLGDIIPTEAINEMEPLSLMTTPVVLPKSNQLIITDTAKNLRSALQILESMQEPQGEEATIRRFDLKHADAATVLLVAATHLGIPENETSGIDITITTDTTGKRLYAVGSEEKLKRLDSLIQVVDVPENTEETS EKTLVSHSLKGDNL
Sbjct: 153 VSFEELAQLNDHEVVKYFAKLGDIIPTEAINEMEPLSLMTTPVVLPKSNQLIITDTAKNLRSALQILESMQEPQGEEATIRRFDLKHADAATVLLVAATHLGIPENETSGIDITITTDTTGKRLYAVGSEEKLKRLDSLIQVVDVPENTEETSIEKTLVSHSLKGDNL 320
BLAST of mRNA_M-pyrifera_M_contig127134.5470.1 vs. uniprot
Match: A0A518C8R0_9BACT (Bacterial type II/III secretion system short domain protein n=2 Tax=Bremerella volcania TaxID=2527984 RepID=A0A518C8R0_9BACT) HSP 1 Score: 278 bits (712), Expect = 6.090e-86 Identity = 146/168 (86.90%), Postives = 155/168 (92.26%), Query Frame = 1
Query: 1 VSFEELAQLNDHEVVKYFAKLGDIIPTEAINEMEPLSLMTTPVVLPKSNQLIITDTAKNLRSALQILESMQEPQGEEATIRRFDLKHADAATVLLVAATHLGIPENETSGIDITITTDTTGKRLYAVGSEEKLKRLDSLIQVVDVPENTEETSFEKTLVSHSLKGDNL 504
VS +EL QLNDHEVVK F KLG++IPTEAINE+EPLSLMTTPVVLPKSNQLIITDTAKNLRS LQ+L SMQEPQ +EA+IRRFDLKHADAATVLLVA THLGIPENETSGIDITITTDTTGKRLYAVGSEEKLKRLDSLIQVVDVPE TE+T EKTLVSH + GDNL
Sbjct: 153 VSPDELEQLNDHEVVKCFVKLGNVIPTEAINELEPLSLMTTPVVLPKSNQLIITDTAKNLRSVLQVLASMQEPQEDEASIRRFDLKHADAATVLLVAGTHLGIPENETSGIDITITTDTTGKRLYAVGSEEKLKRLDSLIQVVDVPEETEDTPIEKTLVSHPVGGDNL 320
BLAST of mRNA_M-pyrifera_M_contig127134.5470.1 vs. uniprot
Match: A0A2S8F0V1_9BACT (General secretion pathway protein n=1 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8F0V1_9BACT) HSP 1 Score: 277 bits (708), Expect = 2.370e-85 Identity = 143/168 (85.12%), Postives = 156/168 (92.86%), Query Frame = 1
Query: 1 VSFEELAQLNDHEVVKYFAKLGDIIPTEAINEMEPLSLMTTPVVLPKSNQLIITDTAKNLRSALQILESMQEPQGEEATIRRFDLKHADAATVLLVAATHLGIPENETSGIDITITTDTTGKRLYAVGSEEKLKRLDSLIQVVDVPENTEETSFEKTLVSHSLKGDNL 504
VS ++L QLNDHEVVK F KLGDI+PTEAINEMEPL+LMTTPVVLP+SNQLIITDTAKNLRSALQILESM+EP GEEA+IRRFDLKH DAATVLLVA+THLGIPEN+TSGIDITITTDTTG+RLYAVGSE+KLKRLDSLIQVVDVPE EE EKTL+SHS+ GDNL
Sbjct: 154 VSPQDLDQLNDHEVVKCFVKLGDIVPTEAINEMEPLTLMTTPVVLPRSNQLIITDTAKNLRSALQILESMKEPHGEEASIRRFDLKHVDAATVLLVASTHLGIPENDTSGIDITITTDTTGRRLYAVGSEDKLKRLDSLIQVVDVPEEAEEAPIEKTLLSHSVSGDNL 321
BLAST of mRNA_M-pyrifera_M_contig127134.5470.1 vs. uniprot
Match: UPI001CCE6F36 (general secretion pathway protein n=1 Tax=Bremerella volcania TaxID=2527984 RepID=UPI001CCE6F36) HSP 1 Score: 242 bits (617), Expect = 3.470e-72 Identity = 122/168 (72.62%), Postives = 144/168 (85.71%), Query Frame = 1
Query: 1 VSFEELAQLNDHEVVKYFAKLGDIIPTEAINEMEPLSLMTTPVVLPKSNQLIITDTAKNLRSALQILESMQEPQGEEATIRRFDLKHADAATVLLVAATHLGIPENETSGIDITITTDTTGKRLYAVGSEEKLKRLDSLIQVVDVPENTEETSFEKTLVSHSLKGDNL 504
VS EL QLNDHEV K F LGD+IPTEAINEM+PLSLMTTPVVLPKSNQLIITDT KNLRSA+Q+L +M++P+ ++ATIRRFDLKH DA TV+ VA THLGIPENE+SGIDITITTD TGKRL+AVGS+EKL RL +L++V+D+PE EE ++TLVSH + GDNL
Sbjct: 159 VSVSELDQLNDHEVAKCFVALGDVIPTEAINEMQPLSLMTTPVVLPKSNQLIITDTGKNLRSAIQVLANMKQPKTDDATIRRFDLKHVDANTVIQVAGTHLGIPENESSGIDITITTDLTGKRLFAVGSDEKLTRLGALLEVIDIPEEEEEAPTQQTLVSHPVGGDNL 326
BLAST of mRNA_M-pyrifera_M_contig127134.5470.1 vs. uniprot
Match: A0A368KWA7_9BACT (General secretion pathway protein n=1 Tax=Blastopirellula cremea TaxID=1031537 RepID=A0A368KWA7_9BACT) HSP 1 Score: 226 bits (575), Expect = 3.460e-66 Identity = 108/168 (64.29%), Postives = 143/168 (85.12%), Query Frame = 1
Query: 1 VSFEELAQLNDHEVVKYFAKLGDIIPTEAINEMEPLSLMTTPVVLPKSNQLIITDTAKNLRSALQILESMQEPQGEEATIRRFDLKHADAATVLLVAATHLGIPENETSGIDITITTDTTGKRLYAVGSEEKLKRLDSLIQVVDVPENTEETSFEKTLVSHSLKGDNL 504
V+ ++L+Q++DHEVVK F LG+++PTE INE++PLSL+TTPVVLPKSNQLIITD+AKNLRSALQ++E+MQ+P+ ++A ++RFDLKH DA TVL+VA THLGIP ET+G+DITITTD +GKR++AVGS EKL RL+SL++VVDVP+ KTL++H + GDNL
Sbjct: 162 VTLDQLSQIDDHEVVKCFVPLGELVPTEVINELQPLSLITTPVVLPKSNQLIITDSAKNLRSALQVIETMQQPEEDDAVVKRFDLKHVDADTVLMVAGTHLGIPTGETNGLDITITTDVSGKRMFAVGSVEKLNRLESLLKVVDVPDEAAVAEKAKTLIAHRITGDNL 329
BLAST of mRNA_M-pyrifera_M_contig127134.5470.1 vs. uniprot
Match: A0A2S8G8I3_9BACT (General secretion pathway protein n=1 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8G8I3_9BACT) HSP 1 Score: 222 bits (565), Expect = 1.060e-64 Identity = 106/168 (63.10%), Postives = 141/168 (83.93%), Query Frame = 1
Query: 1 VSFEELAQLNDHEVVKYFAKLGDIIPTEAINEMEPLSLMTTPVVLPKSNQLIITDTAKNLRSALQILESMQEPQGEEATIRRFDLKHADAATVLLVAATHLGIPENETSGIDITITTDTTGKRLYAVGSEEKLKRLDSLIQVVDVPENTEETSFEKTLVSHSLKGDNL 504
V+ +EL ++DHEVVK F LG+++PTE INEM+PL L+TTPVVLPKSNQLIITD+AKNLRSA+++L +MQ+P+ ++A ++RFDLKH DA TVL+VA THLGIP ET+G+DITITTD +GKR++AVGS EKL RL+SL++VVDVP+ ++ KTL++H + GDNL
Sbjct: 176 VTLDELEGIDDHEVVKCFVPLGELVPTEVINEMQPLKLITTPVVLPKSNQLIITDSAKNLRSAMRVLNAMQQPEEDDAVVKRFDLKHVDAETVLMVAGTHLGIPNGETNGLDITITTDISGKRMFAVGSAEKLDRLESLLKVVDVPDESQAAEKAKTLIAHDVTGDNL 343
BLAST of mRNA_M-pyrifera_M_contig127134.5470.1 vs. uniprot
Match: A0A2S8GBR1_9BACT (General secretion pathway protein n=1 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8GBR1_9BACT) HSP 1 Score: 219 bits (558), Expect = 9.070e-64 Identity = 106/168 (63.10%), Postives = 141/168 (83.93%), Query Frame = 1
Query: 1 VSFEELAQLNDHEVVKYFAKLGDIIPTEAINEMEPLSLMTTPVVLPKSNQLIITDTAKNLRSALQILESMQEPQGEEATIRRFDLKHADAATVLLVAATHLGIPENETSGIDITITTDTTGKRLYAVGSEEKLKRLDSLIQVVDVPENTEETSFEKTLVSHSLKGDNL 504
V+ ++L ++DHEVVK F LG+++PTE INE +PLSL+TTPVVLPKSNQLIITD+AKNLR+AL++LE MQ+P+ ++A ++RFDLKH DA TVL+VA THLGIP +T+G+DITITTD +GKR++AVGS EKL RL+SL++VVDVP+ ++ KTL+SH + GDNL
Sbjct: 162 VTLDQLKGIDDHEVVKCFIPLGELVPTEVINEFQPLSLITTPVVLPKSNQLIITDSAKNLRNALKVLEVMQQPEEDDAVVKRFDLKHVDAETVLMVAGTHLGIPAGDTNGLDITITTDISGKRMFAVGSAEKLDRLESLLKVVDVPDESKAAEKAKTLISHHVTGDNL 329
BLAST of mRNA_M-pyrifera_M_contig127134.5470.1 vs. uniprot
Match: A0A7D8UEA2_9PLAN (General secretion pathway protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7D8UEA2_9PLAN) HSP 1 Score: 172 bits (435), Expect = 1.670e-46 Identity = 86/165 (52.12%), Postives = 117/165 (70.91%), Query Frame = 1
Query: 10 EELAQLNDHEVVKYFAKLGDIIPTEAINEMEPLSLMTTPVVLPKSNQLIITDTAKNLRSALQILESMQEPQGEEATIRRFDLKHADAATVLLVAATHLGIPENETSGIDITITTDTTGKRLYAVGSEEKLKRLDSLIQVVDVPENTEETSFEKTLVSHSLKGDNL 504
+EL Q DHEV+K LGD+ EA E+ PL LMTTPVVLP+SNQL+IT+TA LR+ + +L+SM++PQ + +RRFDLKH D ++LLVA HLGI NET G+DI+I+ D TGKRLY G+EEK++RL L+++VD+P E+ K L +H++ D L
Sbjct: 273 DELGQKGDHEVIKCIVPLGDVNANEATAELRPLMLMTTPVVLPRSNQLVITETAGKLRNVVAVLKSMEQPQAVDVEVRRFDLKHVDLPSLLLVAGRHLGISPNETDGLDISISADLTGKRLYVTGTEEKIERLAKLLEIVDLPGEESESVEGKILRAHAVGADAL 437
BLAST of mRNA_M-pyrifera_M_contig127134.5470.1 vs. uniprot
Match: A0A354PAD2_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A354PAD2_9PLAN) HSP 1 Score: 144 bits (363), Expect = 7.400e-37 Identity = 73/163 (44.79%), Postives = 113/163 (69.33%), Query Frame = 1
Query: 16 LAQLNDHEVVKYFAKLGDIIPTEAINEMEPLSLMTTPVVLPKSNQLIITDTAKNLRSALQILESMQEPQGEEATIRRFDLKHADAATVLLVAATHLGIPENETSGIDITITTDTTGKRLYAVGSEEKLKRLDSLIQVVDVPENTEETSFEKTLVSHSLKGDNL 504
L Q ++HE+VK LG++ EAI E++PLSLM PV+LPKSNQLI+T+TA L+S L +L ++ P+ E+ +RRF+L+H D ATV++VA +H+G+ T G +I+I+TD +GK LY G +K+ RL+S I+++DV + + + + L S+ + GDNL
Sbjct: 198 LDQRSEHEIVKCMVPLGNVNADEAIAELKPLSLMIAPVLLPKSNQLIVTETAGKLKSVLAVLRALDVPE-TESVVRRFELRHVDVATVMMVAGSHIGLASGATEGPEISISTDFSGKNLYVNGLPDKVDRLESFIKILDVADEAAKPTSDMKLRSYPITGDNL 359
BLAST of mRNA_M-pyrifera_M_contig127134.5470.1 vs. uniprot
Match: A0A2D7EDS2_9BACT (General secretion pathway protein n=1 Tax=Rhodopirellula sp. TaxID=2024855 RepID=A0A2D7EDS2_9BACT) HSP 1 Score: 129 bits (325), Expect = 1.030e-31 Identity = 76/170 (44.71%), Postives = 100/170 (58.82%), Query Frame = 1
Query: 1 VSFEELAQLNDHEVVKYFAKLGDIIPTEAINEMEPLSLMTTPVVLPKSNQLIITDTAKNLRSALQILESMQEPQGEEATI-RRFDLKHADAATVLLVAATHLGIPENETSGIDITITTDTTGKRLYAVGSEEKLKRLDSLIQVVDVPENTEETSF-EKTLVSHSLKGDNL 504
V+ +EL N HEV+K LGDI P EA+ E+ ++LMTTP VL K+ QLIITDTA LRS IL + + T+ F LKH A VLLVA HLG+ E GID++I+ D GK ++ G E+K+K L+ L+ VD PE E + E L SH + G N+
Sbjct: 116 VTTDELKDRNRHEVLKCIFPLGDIDPEEAVQELSVMNLMTTPEVLGKTKQLIITDTASKLRSVQSILSAFTPDEMANGTVVESFALKHVSAEDVLLVARPHLGLATGEMIGIDVSISADVLGKNIFVTGMEDKVKLLEGLVNAVDQPEQKESSEEGESVLRSHLVTGGNV 285 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127134.5470.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig127134.5470.1 >prot_M-pyrifera_M_contig127134.5470.1 ID=prot_M-pyrifera_M_contig127134.5470.1|Name=mRNA_M-pyrifera_M_contig127134.5470.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=168bp VSFEELAQLNDHEVVKYFAKLGDIIPTEAINEMEPLSLMTTPVVLPKSNQback to top mRNA from alignment at M-pyrifera_M_contig127134:3..506+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig127134.5470.1 ID=mRNA_M-pyrifera_M_contig127134.5470.1|Name=mRNA_M-pyrifera_M_contig127134.5470.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=504bp|location=Sequence derived from alignment at M-pyrifera_M_contig127134:3..506+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig127134:3..506+ >mRNA_M-pyrifera_M_contig127134.5470.1 ID=mRNA_M-pyrifera_M_contig127134.5470.1|Name=mRNA_M-pyrifera_M_contig127134.5470.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1008bp|location=Sequence derived from alignment at M-pyrifera_M_contig127134:3..506+ (Macrocystis pyrifera P11B4 male)back to top |