mRNA_M-pyrifera_M_contig127110.5465.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig127110.5465.1 vs. uniprot
Match: A0A5A8E9B2_CAFRO (Hypothetical protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E9B2_CAFRO) HSP 1 Score: 146 bits (368), Expect = 1.770e-40 Identity = 71/142 (50.00%), Postives = 100/142 (70.42%), Query Frame = 1
Query: 1 GVIVNIAMDT-HAFPMLSHSVASREAVLSLTKSMAVEWVKQGVRVCAVSPGFIYSDSAFAHYGGLADTFMSTMLPAIPAKRLGSVEEVSGAVSFLLSPAASYITGINLPIDGGSKFVLKPLFDIPDITHLPVYGTLPTQAKM 423
G IV +++D + P ++HS A+R + +L K++++EW GVRV AV+PG IYS+SAF+HYG A+ +S +LPAIPAKRLG+ EEV+G V+FLLSPAASY+TG + I GGS V KPL + + YG LP +A++
Sbjct: 162 GAIVAMSLDVDNGMPGMAHSAAARAGINNLVKTLSIEWAASGVRVNAVAPGIIYSESAFSHYGDAAEDLLSALLPAIPAKRLGTPEEVAGVVAFLLSPAASYVTGSTVAIGGGSHLVRKPLLPMDEPCASQPYGRLPRKARL 303
BLAST of mRNA_M-pyrifera_M_contig127110.5465.1 vs. uniprot
Match: A0A7S3LDG3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LDG3_9STRA) HSP 1 Score: 145 bits (365), Expect = 3.130e-40 Identity = 71/134 (52.99%), Postives = 95/134 (70.90%), Query Frame = 1
Query: 1 GVIVNIAM-DTHAFPMLSHSVASREAVLSLTKSMAVEWVKQGVRVCAVSPGFIYSDSAFAHYGGLADTFMSTMLPAIPAKRLGSVEEVSGAVSFLLSPAASYITGINLPIDGGSKFVLKPLFDIPDITHLPVYG 399
G IVNI + + + P +SHS A+R V +LTKS+A EW++ GVRV V PG I+++S FA YG + F+ +LPAIPAKRLG+ EEVS AV +LLSP A+Y+TG + +DGG+ L P+ DIP+ HLPVYG
Sbjct: 151 GSIVNITLVNANGLPGMSHSAAARAGVENLTKSLATEWMEAGVRVNCVRPGIIWTESGFAAYGDAGEEFLQKLLPAIPAKRLGTPEEVSSAVVWLLSPGANYVTGTTVSVDGGAGLTLLPMMDIPNHYHLPVYG 284
BLAST of mRNA_M-pyrifera_M_contig127110.5465.1 vs. uniprot
Match: A0A6S9IJ31_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9IJ31_HETAK) HSP 1 Score: 144 bits (364), Expect = 4.760e-40 Identity = 73/142 (51.41%), Postives = 99/142 (69.72%), Query Frame = 1
Query: 1 GVIVNIAMDT-HAFPMLSHSVASREAVLSLTKSMAVEWVKQGVRVCAVSPGFIYSDSAFAHYGGLADTFMSTMLPAIPAKRLGSVEEVSGAVSFLLSPAASYITGINLPIDGGSKFVLKPLFDIPDITHLPVYGTLPTQAKM 423
G IVNI M + FPM++HS A+R V +LT+S+A+EWV GVR+ VSPG IY++S FA+YG +A+ + ++ AIPAKRLG+ +E +GA FLLSPAA+YITG + +DGG PL I + L VYGTLP +AK+
Sbjct: 146 GAIVNIIMSMRNGFPMMAHSGAARAGVENLTRSLALEWVNAGVRLNCVSPGIIYTESGFANYGPVAEKLLPQLMKAIPAKRLGTPQETAGAAVFLLSPAAAYITGTTVDVDGGLGMSYLPLVRIKNKNRLGVYGTLPPKAKL 287
BLAST of mRNA_M-pyrifera_M_contig127110.5465.1 vs. uniprot
Match: B7G2W7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G2W7_PHATC) HSP 1 Score: 142 bits (359), Expect = 2.800e-39 Identity = 71/142 (50.00%), Postives = 97/142 (68.31%), Query Frame = 1
Query: 1 GVIVNIAM-DTHAFPMLSHSVASREAVLSLTKSMAVEWVKQGVRVCAVSPGFIYSDSAFAHYGGLADTFMSTMLPAIPAKRLGSVEEVSGAVSFLLSPAASYITGINLPIDGGSKFVLKPLFDIPDITHLPVYGTLPTQAKM 423
G IVNI + + + PM+SHS ASR V +LT +++ EW++ VRV V PG I+++S F +YG + F+ +LPA+PA+R GS EEVS AV +LLS ASY+TG L +DG S + L PL DI D HLP YGTLP +A++
Sbjct: 148 GAIVNITLGNRNGMPMMSHSGASRAGVENLTATLSTEWMESNVRVNCVRPGIIWTESGFENYGPAGEMFVERLLPAMPARRFGSPEEVSSAVVWLLSEGASYVTGTVLNVDGASAYTLLPLRDIEDKEHLPFYGTLPRKARL 289
BLAST of mRNA_M-pyrifera_M_contig127110.5465.1 vs. uniprot
Match: A0A1E7FB54_9STRA (NAD(P)-binding protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FB54_9STRA) HSP 1 Score: 135 bits (339), Expect = 3.540e-36 Identity = 66/142 (46.48%), Postives = 95/142 (66.90%), Query Frame = 1
Query: 1 GVIVNIAM-DTHAFPMLSHSVASREAVLSLTKSMAVEWVKQGVRVCAVSPGFIYSDSAFAHYGGLADTFMSTMLPAIPAKRLGSVEEVSGAVSFLLSPAASYITGINLPIDGGSKFVLKPLFDIPDITHLPVYGTLPTQAKM 423
G IVNI + + + P + HS A+R V ++T S+ EW++ VR+ V PG I++DS F +YG + F+ M ++PA+RLGS +EVS AV++LLS ASY+TG L +DGG +V PL +I D +LPVYGTLP +AK+
Sbjct: 159 GTIVNITIGNRNGMPGMMHSAAARSGVENMTASLCTEWIESKVRINCVRPGIIFTDSGFKNYGPAGEYFIKKMNKSLPARRLGSPQEVSSAVTWLLSEGASYVTGAILCVDGGGSYVGLPLIEIEDKANLPVYGTLPARAKL 300
BLAST of mRNA_M-pyrifera_M_contig127110.5465.1 vs. uniprot
Match: A0A6P7SPI7_OCTVU (peroxisomal trans-2-enoyl-CoA reductase n=2 Tax=Octopus TaxID=6643 RepID=A0A6P7SPI7_OCTVU) HSP 1 Score: 130 bits (326), Expect = 2.730e-34 Identity = 73/134 (54.48%), Postives = 91/134 (67.91%), Query Frame = 1
Query: 1 GVIVNIAMDT-HAFPMLSHSVASREAVLSLTKSMAVEWVKQGVRVCAVSPGFIYSDSAFAHYGGLADTFMSTMLPAIPAKRLGSVEEVSGAVSFLLSPAASYITGINLPIDGGSKFVLKPLFDIPDITHLPVYG 399
G IVNI D FPM+SH+ A+R V +LTKS+++EW + GVRV AV+PG IYS +A A+YG L D F S P IPAKRLG EE+S AV FLLSPAASYITG + +DG S + L+D+PD + P Y
Sbjct: 148 GSIVNIIADMWKGFPMMSHTGAARAGVDNLTKSLSIEWAESGVRVNAVAPGLIYSKTAAANYGDL-DVF-SMSKPLIPAKRLGQPEEISAAVCFLLSPAASYITGTTIKVDGASS-LYSTLYDVPDHKNWPEYS 278
BLAST of mRNA_M-pyrifera_M_contig127110.5465.1 vs. uniprot
Match: A0A7S2YKB5_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YKB5_9STRA) HSP 1 Score: 130 bits (326), Expect = 3.060e-34 Identity = 65/141 (46.10%), Postives = 94/141 (66.67%), Query Frame = 1
Query: 7 IVNIAM-DTHAFPMLSHSVASREAVLSLTKSMAVEWVKQGVRVCAVSPGFIYSDSAFAHYGGLADTFMSTMLPAIPAKRLGSVEEVSGAVSFLLSPAASYITGINLPIDGGSKFVLKPLFDIPDITHLPVYGT-LPTQAKM 423
IVNI + + + P + HS A+R V ++T ++ EW++ GVR+ V PG I+++S FA YG + +LP++PAKR G+ +EV AV +LLS AASY+TG L +DGGS + PL DIP+ +LP YGT LPTQA++
Sbjct: 160 IVNITLGNRNGMPYMVHSGAARAGVENMTATLCTEWIESGVRINCVRPGVIWTESGFAAYGEQGAAYAQKLLPSMPAKRFGTPQEVGSAVVWLLSDAASYVTGAVLCVDGGSSYTYLPLVDIPNEMNLPTYGTPLPTQARL 300
BLAST of mRNA_M-pyrifera_M_contig127110.5465.1 vs. uniprot
Match: K0SLU0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SLU0_THAOC) HSP 1 Score: 131 bits (330), Expect = 3.720e-34 Identity = 70/162 (43.21%), Postives = 99/162 (61.11%), Query Frame = 1
Query: 1 GVIVNIAM-DTHAFPMLSHSVASREAVLSLTKSMAVEWVKQGVRVCAVSPGFIYSDSAFAHYGGLADTFMSTMLPAIPAKRLGSVEEVSGAVSFLLSPAASYITGINLPIDGGSKFVLKPLF--------------------DIPDITHLPVYGTLPTQAKM 423
G IVNI + + + P ++HS A+R V ++T +M+ EW++ GVR+ V PG +++DS F +YG DTF+ +LP+ PAKR S EE+S AV +LLS ASY+TG + +DGGS+F PL DI D +LPVYGTLPT+AK+
Sbjct: 217 GSIVNITLGNRNGMPGMAHSGAARAGVENMTITMSQEWIESGVRINCVRPGIVFTDSGFDNYGPAGDTFLERILPSQPAKRFASPEEISSAVCWLLSDGASYVTGSVVCVDGGSQFHFLPLMPGKCEIFIRLSSTYVRVFSADIEDSANLPVYGTLPTKAKL 378
BLAST of mRNA_M-pyrifera_M_contig127110.5465.1 vs. uniprot
Match: A0A7M7G9H7_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7G9H7_STRPU) HSP 1 Score: 127 bits (318), Expect = 5.620e-33 Identity = 66/135 (48.89%), Postives = 89/135 (65.93%), Query Frame = 1
Query: 1 GVIVNIAMDT-HAFPMLSHSVASREAVLSLTKSMAVEWVKQGVRVCAVSPGFIYSDSAFAHYGGLADTFMSTMLPAIPAKRLGSVEEVSGAVSFLLSPAASYITGINLPIDGGSKFVLKPL-FDIPDITHLPVYG 399
GVIVNI D FP ++HS A+R VL+LTK+ ++EW GVR+ +V+PG ++ A HYG ++ +PAIPAKRLG+ EE+S AV+FLLSPAASYITG + +DGGS PL F + D ++P Y
Sbjct: 152 GVIVNILGDLWRGFPSMAHSCAARAGVLNLTKTASLEWAHHGVRINSVAPGTVFGKEASEHYG--SNKLFELAIPAIPAKRLGTPEEISAAVTFLLSPAASYITGETIKVDGGSSLYQLPLGFTVKDHNNMPAYS 284
BLAST of mRNA_M-pyrifera_M_contig127110.5465.1 vs. uniprot
Match: UPI0014259D4D (peroxisomal trans-2-enoyl-CoA reductase-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014259D4D) HSP 1 Score: 125 bits (313), Expect = 6.840e-33 Identity = 66/133 (49.62%), Postives = 91/133 (68.42%), Query Frame = 1
Query: 1 GVIVNIAMDT-HAFPMLSHSVASREAVLSLTKSMAVEWVKQGVRVCAVSPGFIYSDSAFAHYGGLADTFMSTMLPAIPAKRLGSVEEVSGAVSFLLSPAASYITGINLPIDGGSKFVLKPLFDIPDITHLPVY 396
G IVNI +D + FP++SH+ A+R V++L+K++++EW GVR+ V+PG +YS++A A+Y D F + +PAIPAKRLG VEE+S AV FLLSPAA+YITG L +DGGS + IPD P Y
Sbjct: 91 GSIVNIVVDFWNGFPLMSHTSAARAGVVNLSKTLSIEWAANGVRINNVAPGTVYSETAAANYPD-PDLFEKS-IPAIPAKRLGKVEEISAAVCFLLSPAAAYITGDTLKVDGGSSINNPSMLTIPDHNKYPTY 221 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127110.5465.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig127110.5465.1 >prot_M-pyrifera_M_contig127110.5465.1 ID=prot_M-pyrifera_M_contig127110.5465.1|Name=mRNA_M-pyrifera_M_contig127110.5465.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=135bp MDTHAFPMLSHSVASREAVLSLTKSMAVEWVKQGVRVCAVSPGFIYSDSAback to top mRNA from alignment at M-pyrifera_M_contig127110:80..505- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig127110.5465.1 ID=mRNA_M-pyrifera_M_contig127110.5465.1|Name=mRNA_M-pyrifera_M_contig127110.5465.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=426bp|location=Sequence derived from alignment at M-pyrifera_M_contig127110:80..505- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig127110:80..505- >mRNA_M-pyrifera_M_contig127110.5465.1 ID=mRNA_M-pyrifera_M_contig127110.5465.1|Name=mRNA_M-pyrifera_M_contig127110.5465.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=810bp|location=Sequence derived from alignment at M-pyrifera_M_contig127110:80..505- (Macrocystis pyrifera P11B4 male)back to top |