mRNA_M-pyrifera_M_contig127097.5455.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig127097.5455.1
Unique NamemRNA_M-pyrifera_M_contig127097.5455.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig127097.5455.1 vs. uniprot
Match: A0A4S8WPA1_AURPU (Glucosamine-6-phosphate isomerase (Fragment) n=1 Tax=Aureobasidium pullulans TaxID=5580 RepID=A0A4S8WPA1_AURPU)

HSP 1 Score: 87.8 bits (216), Expect = 7.040e-20
Identity = 42/54 (77.78%), Postives = 49/54 (90.74%), Query Frame = 1 
Query:    1 MALTVGVGTIMDAREVVIIVTGSKKAIALSKCVEGGVSHMWTLSSLQLHPRSAI 162
            MALTVGV T++DAREVVII+TGS KA+AL KC+EGGV+HMWTLSSLQLHP + I
Sbjct:  171 MALTVGVQTVLDAREVVIIITGSHKALALQKCIEGGVNHMWTLSSLQLHPHAMI 224
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BLAST of mRNA_M-pyrifera_M_contig127097.5455.1 vs. uniprot
Match: A0A1Y1ZX73_9PLEO (Glucosamine-6-phosphate isomerase n=1 Tax=Clohesyomyces aquaticus TaxID=1231657 RepID=A0A1Y1ZX73_9PLEO)

HSP 1 Score: 89.0 bits (219), Expect = 1.300e-19
Identity = 42/54 (77.78%), Postives = 49/54 (90.74%), Query Frame = 1 
Query:    1 MALTVGVGTIMDAREVVIIVTGSKKAIALSKCVEGGVSHMWTLSSLQLHPRSAI 162
            MALTVGVGT++DAREVVII+TG+ KA+AL KC+EGGV+HMWTLSSLQLHP   I
Sbjct:  218 MALTVGVGTVLDAREVVIIITGAHKALALQKCIEGGVNHMWTLSSLQLHPHPMI 271
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BLAST of mRNA_M-pyrifera_M_contig127097.5455.1 vs. uniprot
Match: A0A1Y1ZPK0_9PLEO (Uncharacterized protein n=1 Tax=Clohesyomyces aquaticus TaxID=1231657 RepID=A0A1Y1ZPK0_9PLEO)

HSP 1 Score: 85.1 bits (209), Expect = 1.500e-19
Identity = 40/54 (74.07%), Postives = 49/54 (90.74%), Query Frame = 1 
Query:    1 MALTVGVGTIMDAREVVIIVTGSKKAIALSKCVEGGVSHMWTLSSLQLHPRSAI 162
            MALTVGV TI++AREV+IIVTG++KA AL KC+EGGV+HMWTLS+LQLHP S +
Sbjct:    1 MALTVGVQTILEAREVIIIVTGAQKAFALQKCIEGGVNHMWTLSALQLHPHSMV 54
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BLAST of mRNA_M-pyrifera_M_contig127097.5455.1 vs. uniprot
Match: A0A4U0TNI5_9PEZI (Glucosamine-6-phosphate isomerase n=1 Tax=Salinomyces thailandica TaxID=706561 RepID=A0A4U0TNI5_9PEZI)

HSP 1 Score: 88.6 bits (218), Expect = 1.580e-19
Identity = 40/54 (74.07%), Postives = 50/54 (92.59%), Query Frame = 1 
Query:    1 MALTVGVGTIMDAREVVIIVTGSKKAIALSKCVEGGVSHMWTLSSLQLHPRSAI 162
            MALTVGVGT++DAREVV+I+TG+ KA+AL KC+EGGV+HMWTLSSLQ+HP + I
Sbjct:  186 MALTVGVGTVLDAREVVVIITGAHKALALQKCIEGGVNHMWTLSSLQMHPHAMI 239
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BLAST of mRNA_M-pyrifera_M_contig127097.5455.1 vs. uniprot
Match: A0A2G5B9Z9_COERN (Glucosamine-6-phosphate isomerase n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5B9Z9_COERN)

HSP 1 Score: 85.5 bits (210), Expect = 1.600e-19
Identity = 38/54 (70.37%), Postives = 50/54 (92.59%), Query Frame = 1 
Query:    1 MALTVGVGTIMDAREVVIIVTGSKKAIALSKCVEGGVSHMWTLSSLQLHPRSAI 162
            +ALTVGVGT+MDAREVV+I+TG+ KAIAL+KC+E GV+HMWT+S++Q HPRS +
Sbjct:  114 LALTVGVGTVMDAREVVVIITGANKAIALAKCIEEGVNHMWTVSAIQTHPRSLV 167
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BLAST of mRNA_M-pyrifera_M_contig127097.5455.1 vs. uniprot
Match: A0A150UTE0_9PEZI (Glucosamine-6-phosphate isomerase n=1 Tax=Acidomyces richmondensis BFW TaxID=766039 RepID=A0A150UTE0_9PEZI)

HSP 1 Score: 87.8 bits (216), Expect = 2.940e-19
Identity = 42/54 (77.78%), Postives = 49/54 (90.74%), Query Frame = 1 
Query:    1 MALTVGVGTIMDAREVVIIVTGSKKAIALSKCVEGGVSHMWTLSSLQLHPRSAI 162
            MALTVGV T+MDAREVVII+TG+ KA+AL KC+EGGV+HMWTLSSLQLHP + I
Sbjct:  184 MALTVGVQTVMDAREVVIIITGAHKALALQKCIEGGVNHMWTLSSLQLHPHAMI 237
[Close]
BLAST of mRNA_M-pyrifera_M_contig127097.5455.1 vs. uniprot
Match: A0A074Y0G1_AURSE (Glucosamine-6-phosphate deaminase n=35 Tax=Aureobasidium TaxID=5579 RepID=A0A074Y0G1_AURSE)

HSP 1 Score: 87.8 bits (216), Expect = 4.350e-19
Identity = 42/54 (77.78%), Postives = 49/54 (90.74%), Query Frame = 1 
Query:    1 MALTVGVGTIMDAREVVIIVTGSKKAIALSKCVEGGVSHMWTLSSLQLHPRSAI 162
            MALTVGV T++DAREVVII+TGS KA+AL KC+EGGV+HMWTLSSLQLHP + I
Sbjct:  185 MALTVGVQTVLDAREVVIIITGSHKALALQKCIEGGVNHMWTLSSLQLHPHAMI 238
[Close]
BLAST of mRNA_M-pyrifera_M_contig127097.5455.1 vs. uniprot
Match: A0A1Y1WKT7_9FUNG (Glucosamine-6-phosphate isomerase n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1WKT7_9FUNG)

HSP 1 Score: 85.5 bits (210), Expect = 8.300e-19
Identity = 38/54 (70.37%), Postives = 50/54 (92.59%), Query Frame = 1 
Query:    1 MALTVGVGTIMDAREVVIIVTGSKKAIALSKCVEGGVSHMWTLSSLQLHPRSAI 162
            +ALTVGVGT+MDAREVV+I+TG+ KAIAL+KC+E GV+HMWT+S++Q HPRS +
Sbjct:  173 LALTVGVGTVMDAREVVVIITGANKAIALAKCIEEGVNHMWTVSAIQTHPRSLV 226
[Close]
BLAST of mRNA_M-pyrifera_M_contig127097.5455.1 vs. uniprot
Match: A0A2T9Z7C6_9FUNG (Glucosamine-6-phosphate isomerase n=1 Tax=Smittium megazygosporum TaxID=133381 RepID=A0A2T9Z7C6_9FUNG)

HSP 1 Score: 85.5 bits (210), Expect = 1.040e-18
Identity = 40/54 (74.07%), Postives = 50/54 (92.59%), Query Frame = 1 
Query:    1 MALTVGVGTIMDAREVVIIVTGSKKAIALSKCVEGGVSHMWTLSSLQLHPRSAI 162
            +ALTVGVGT+MDAREVVII+TG+ KAIAL+KC+E GV+HMWT+SS+QLHP + I
Sbjct:  184 LALTVGVGTVMDAREVVIIITGAHKAIALAKCIEEGVNHMWTVSSIQLHPSAMI 237
[Close]
BLAST of mRNA_M-pyrifera_M_contig127097.5455.1 vs. uniprot
Match: A0A8E2EKP3_9PEZI (Glucosamine-6-phosphate isomerase n=1 Tax=Lepidopterella palustris CBS 459.81 TaxID=1314670 RepID=A0A8E2EKP3_9PEZI)

HSP 1 Score: 86.3 bits (212), Expect = 1.120e-18
Identity = 42/54 (77.78%), Postives = 48/54 (88.89%), Query Frame = 1 
Query:    1 MALTVGVGTIMDAREVVIIVTGSKKAIALSKCVEGGVSHMWTLSSLQLHPRSAI 162
            MALTVGV TI+DAREVVII+TG+ KA+AL KC+EGGV+HMWTLSSLQLHP   I
Sbjct:  184 MALTVGVQTILDAREVVIIITGAHKALALQKCIEGGVNHMWTLSSLQLHPHPLI 237
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127097.5455.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4S8WPA1_AURPU7.040e-2077.78Glucosamine-6-phosphate isomerase (Fragment) n=1 T... [more]
A0A1Y1ZX73_9PLEO1.300e-1977.78Glucosamine-6-phosphate isomerase n=1 Tax=Clohesyo... [more]
A0A1Y1ZPK0_9PLEO1.500e-1974.07Uncharacterized protein n=1 Tax=Clohesyomyces aqua... [more]
A0A4U0TNI5_9PEZI1.580e-1974.07Glucosamine-6-phosphate isomerase n=1 Tax=Salinomy... [more]
A0A2G5B9Z9_COERN1.600e-1970.37Glucosamine-6-phosphate isomerase n=1 Tax=Coemansi... [more]
A0A150UTE0_9PEZI2.940e-1977.78Glucosamine-6-phosphate isomerase n=1 Tax=Acidomyc... [more]
A0A074Y0G1_AURSE4.350e-1977.78Glucosamine-6-phosphate deaminase n=35 Tax=Aureoba... [more]
A0A1Y1WKT7_9FUNG8.300e-1970.37Glucosamine-6-phosphate isomerase n=1 Tax=Linderin... [more]
A0A2T9Z7C6_9FUNG1.040e-1874.07Glucosamine-6-phosphate isomerase n=1 Tax=Smittium... [more]
A0A8E2EKP3_9PEZI1.120e-1877.78Glucosamine-6-phosphate isomerase n=1 Tax=Lepidopt... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig127097contigM-pyrifera_M_contig127097:95..320 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score85.9
Seed ortholog evalue6.4e-15
Seed eggNOG ortholog430998.XP_007680052.1
Preferred nameNAG1
KEGG rclassRC00163
KEGG koko:K02564
KEGG ReactionR00765
KEGG Pathwayko00520,ko01100,map00520,map01100
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0003674,GO:0003824,GO:0004342,GO:0006040,GO:0006041,GO:0006043,GO:0006044,GO:0006046,GO:0008150,GO:0008152,GO:0009056,GO:0009405,GO:0009607,GO:0016787,GO:0016853,GO:0016860,GO:0016861,GO:0019239,GO:0030447,GO:0036180,GO:0040007,GO:0044182,GO:0044419,GO:0046348,GO:0050896,GO:0051704,GO:0071704,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901575
EggNOG free text desc.Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
EggNOG OGs1ZXF7@147541,38G53@33154,3MJH6@451867,3NVFS@4751,3QMHH@4890,COG0363@1,KOG3148@2759
EC3.5.99.6
COG Functional cat.G
Best tax levelDothideomycetidae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons2
Model size162
Cds size162
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815784.7026896-CDS-M-pyrifera_M_contig127097:94..2111622815784.7026896-CDS-M-pyrifera_M_contig127097:94..211Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig127097 95..211 -
1692277568.0165837-CDS-M-pyrifera_M_contig127097:94..2111692277568.0165837-CDS-M-pyrifera_M_contig127097:94..211Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig127097 95..211 -
1622815784.7168126-CDS-M-pyrifera_M_contig127097:275..3201622815784.7168126-CDS-M-pyrifera_M_contig127097:275..320Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig127097 276..320 -
1692277568.0314016-CDS-M-pyrifera_M_contig127097:275..3201692277568.0314016-CDS-M-pyrifera_M_contig127097:275..320Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig127097 276..320 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig127097.5455.1prot_M-pyrifera_M_contig127097.5455.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig127097 95..320 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig127097.5455.1

>prot_M-pyrifera_M_contig127097.5455.1 ID=prot_M-pyrifera_M_contig127097.5455.1|Name=mRNA_M-pyrifera_M_contig127097.5455.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=54bp
MALTVGVGTIMDAREVVIIVTGSKKAIALSKCVEGGVSHMWTLSSLQLHP
RSAI
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mRNA from alignment at M-pyrifera_M_contig127097:95..320-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig127097.5455.1 ID=mRNA_M-pyrifera_M_contig127097.5455.1|Name=mRNA_M-pyrifera_M_contig127097.5455.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=226bp|location=Sequence derived from alignment at M-pyrifera_M_contig127097:95..320- (Macrocystis pyrifera P11B4 male)
ATGGCGCTCACTGTGGGCGTTGGCACCATCATGGACGCAAGAGAGGTGCA
ATGTGGTGAAGTATGCGTTGGGCAACTCTCCGTGTGACGCATTGTGCGCG
CGTGTGCAGGTGGTGATCATCGTGACTGGGTCGAAGAAAGCGATTGCGCT
GTCCAAGTGCGTGGAAGGGGGCGTCAGCCACATGTGGACTCTGTCCTCGC
TGCAGTTGCACCCACGGTCTGCCATC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig127097:95..320-

>mRNA_M-pyrifera_M_contig127097.5455.1 ID=mRNA_M-pyrifera_M_contig127097.5455.1|Name=mRNA_M-pyrifera_M_contig127097.5455.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=324bp|location=Sequence derived from alignment at M-pyrifera_M_contig127097:95..320- (Macrocystis pyrifera P11B4 male)
ATGGCGCTCACTGTGGGCGTTGGCACCATCATGGACGCAAGAGAGATGGC
GCTCACTGTGGGCGTTGGCACCATCATGGACGCAAGAGAGGTGGTGATCA
TCGTGACTGGGTCGAAGAAAGCGATTGCGCTGTCCAAGTGCGTGGAAGGG
GGCGTCAGCCACATGTGGACTCTGTCCTCGCTGCAGTTGCACCCACGGTC
TGCCATCGTGGTGATCATCGTGACTGGGTCGAAGAAAGCGATTGCGCTGT
CCAAGTGCGTGGAAGGGGGCGTCAGCCACATGTGGACTCTGTCCTCGCTG
CAGTTGCACCCACGGTCTGCCATC
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