mRNA_M-pyrifera_M_contig127092.5452.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig127092.5452.1 vs. uniprot
Match: UPI001884F686 (cotranscriptional regulator FAM172A homolog n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI001884F686) HSP 1 Score: 63.2 bits (152), Expect = 1.050e-9 Identity = 34/97 (35.05%), Postives = 47/97 (48.45%), Query Frame = 1
Query: 16 VLVSADWLSDRDRLVLVHGSGHLPPGVWSRSACVELGLQAGTMLPYAERGRQLGFSVAILNPNARW----------VAADAPVRHVVSFWDTFLRPA 276
V S + L+LVHGSG + G W+R + GLQ GT LPY +R G+ V +LN N + P H ++ WDT++RPA
Sbjct: 90 VFASPGYADAARLLLLVHGSGVVRAGQWTRRLIINNGLQEGTQLPYIKRALAAGYGVLVLNTNDNHRVQNKQKQLIPGSGRPEEHALTVWDTYVRPA 186
BLAST of mRNA_M-pyrifera_M_contig127092.5452.1 vs. uniprot
Match: UPI00071189BE (protein kinase n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI00071189BE) HSP 1 Score: 63.2 bits (152), Expect = 1.300e-9 Identity = 33/85 (38.82%), Postives = 44/85 (51.76%), Query Frame = 1
Query: 49 DRLVLVHGSGHLPPGVWSRSACVELGLQAGTMLPYAERGRQLGFSVAILNPNARWVA---------------ADAPVRHVVSFWD 258
D L+L+ S PG+WSRS CVE GLQ G+MLP+ + QLG V + NPN V ++ P +HV+ WD
Sbjct: 36 DNLLLIIPSSGTMPGIWSRSLCVEKGLQVGSMLPFFVKAIQLGIGVIVFNPNVNNVRVPSPQGGYVKRSIPHSETPDQHVIYVWD 120
BLAST of mRNA_M-pyrifera_M_contig127092.5452.1 vs. uniprot
Match: A0A1B0GIA4_LUTLO (Arb2 domain-containing protein n=2 Tax=Lutzomyia longipalpis TaxID=7200 RepID=A0A1B0GIA4_LUTLO) HSP 1 Score: 60.8 bits (146), Expect = 7.260e-9 Identity = 32/92 (34.78%), Postives = 49/92 (53.26%), Query Frame = 1
Query: 25 SADWLSDRDRLVLVHGSGHLPPGVWSRSACVELGLQAGTMLPYAERGRQLGFSVAILNPN--------ARWVAADAPVRHVVSFWDTFLRPA 276
S ++L+ LVL+HGSG + G WSRS + + AGT LPY E+ R +GF V N N R+ ++ V H + W+ ++ P+
Sbjct: 99 SKEFLNAEKLLVLIHGSGVVRAGQWSRSLIINHSIAAGTQLPYIEKARNMGFEVISTNTNDNHRDGKSIRY--SEDSVEHAIYVWEKYIMPS 188
BLAST of mRNA_M-pyrifera_M_contig127092.5452.1 vs. uniprot
Match: A0A131YVS0_RHIAP (GPI inositol-deacylase n=7 Tax=Rhipicephalinae TaxID=426437 RepID=A0A131YVS0_RHIAP) HSP 1 Score: 59.3 bits (142), Expect = 2.860e-8 Identity = 30/67 (44.78%), Postives = 43/67 (64.18%), Query Frame = 1
Query: 7 STPVLVSADWLSDRDRL-VLVHGSGHLPPGVWSRSACVELGLQAGTMLPYAERGRQLGFSVAILNPN 204
S+ + VS D +++DRL +L+HGSG + G WSR V L+ GT LPY R + LG++V +LN N
Sbjct: 117 SSFIFVSEDAFTNKDRLLILIHGSGVVRAGQWSRRLIVNDSLKKGTQLPYIRRAQGLGYAVIVLNTN 183
BLAST of mRNA_M-pyrifera_M_contig127092.5452.1 vs. uniprot
Match: UPI001E675273 (cotranscriptional regulator FAM172A-like isoform X1 n=2 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E675273) HSP 1 Score: 59.3 bits (142), Expect = 3.090e-8 Identity = 29/100 (29.00%), Postives = 55/100 (55.00%), Query Frame = 1
Query: 7 STPVLVSADWLSDRDR-LVLVHGSGHLPPGVWSRSACVELGLQAGTMLPYAERGRQLGFSVAILNPN-----------ARWVAADAPVRHVVSFWDTFLR 270
ST + +S D +S+ ++ LVL+HGSG + G WSR + L +GT +P+ ++ ++ G+ + ++N N +R ++ P H + WD ++R
Sbjct: 93 STFIFISEDAMSNPEKILVLIHGSGVVRAGQWSRRLIINDSLDSGTQIPFIKKAQEEGYGIIVMNTNDNYRTNRKKNRSRIRGSENPDNHALHVWDNYIR 192
BLAST of mRNA_M-pyrifera_M_contig127092.5452.1 vs. uniprot
Match: A0A196SKH2_BLAHN (Protein kinase n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SKH2_BLAHN) HSP 1 Score: 59.3 bits (142), Expect = 3.220e-8 Identity = 34/106 (32.08%), Postives = 56/106 (52.83%), Query Frame = 1
Query: 4 ASTPVLVSADWLSDRDRLVLVHGSGHLPPGVWSRSACVELGLQAGTMLPYAERGRQLGFSVAILNPN--------ARWVAADAPV-------RHVVSFWDTFLRPA 276
A + + + LS + LV++ +G +P G+WSR+ C+E GLQ GTMLP+ + +G V +LNPN ++ V++ P+ HV+ WD + A
Sbjct: 81 ARSSIFATKGCLSADNLLVIIPSAGTMP-GLWSRTLCIEKGLQIGTMLPFFIKAINMGLGVIVLNPNVNSAKVMTSQGVSSRVPIPHNETPDMHVLYIWDRIISRA 185
BLAST of mRNA_M-pyrifera_M_contig127092.5452.1 vs. uniprot
Match: A0A2G9T452_TELCI (Uncharacterized protein (Fragment) n=1 Tax=Teladorsagia circumcincta TaxID=45464 RepID=A0A2G9T452_TELCI) HSP 1 Score: 55.8 bits (133), Expect = 6.670e-8 Identity = 23/75 (30.67%), Postives = 43/75 (57.33%), Query Frame = 1
Query: 55 LVLVHGSGHLPPGVWSRSACVELGLQAGTMLPYAERGRQLGFSVAILNPNARWVAADAPVRHVVSFWDTFLRPAP 279
++++HGSG + PG WSR + L+ G+ +PY +R + G+ V + + N D P RH+ + ++ L+ +P
Sbjct: 30 VLIIHGSGAVRPGQWSRRLILNESLETGSQIPYIQRATKNGWGVIVCSTNTDEEVQDYPRRHICAVYEQLLKDSP 104
BLAST of mRNA_M-pyrifera_M_contig127092.5452.1 vs. uniprot
Match: A0A2R5LD69_9ACAR (Uncharacterized protein (Fragment) n=1 Tax=Ornithodoros turicata TaxID=34597 RepID=A0A2R5LD69_9ACAR) HSP 1 Score: 58.2 bits (139), Expect = 7.340e-8 Identity = 34/98 (34.69%), Postives = 51/98 (52.04%), Query Frame = 1
Query: 7 STPVLVSADWLSDRDRL-VLVHGSGHLPPGVWSRSACVELGLQAGTMLPYAERGRQLGFSVAILNPNARWVA----------ADAPVRHVVSFWDTFL 267
ST + S D L++R++L VL+HGSG + G WSR V L+ GT LP+ R LG+ V +LN N + ++ P +H W+ F+
Sbjct: 103 STFIFASDDALTNRNKLLVLIHGSGTVRAGQWSRRLIVNDSLKKGTQLPFIRRALGLGYGVIVLNTNDNFRMHGEVKRAIRESETPEKHAGYVWEWFI 200
BLAST of mRNA_M-pyrifera_M_contig127092.5452.1 vs. uniprot
Match: A0A293LNW8_ORNER (Uncharacterized protein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293LNW8_ORNER) HSP 1 Score: 58.2 bits (139), Expect = 7.420e-8 Identity = 34/98 (34.69%), Postives = 51/98 (52.04%), Query Frame = 1
Query: 7 STPVLVSADWLSDRDRL-VLVHGSGHLPPGVWSRSACVELGLQAGTMLPYAERGRQLGFSVAILNPNARWVA----------ADAPVRHVVSFWDTFL 267
ST + S D L++R++L VL+HGSG + G WSR V L+ GT LP+ R LG+ V +LN N + ++ P +H W+ F+
Sbjct: 111 STFIFASDDALTNRNKLLVLIHGSGTVRAGQWSRRLIVNDSLKKGTQLPFIRRALGLGYGVIVLNTNDNFRMCGDVRRAIRDSETPEKHARYVWEWFI 208
BLAST of mRNA_M-pyrifera_M_contig127092.5452.1 vs. uniprot
Match: UPI0012D3E522 (FAM172 family protein homolog CG10038 isoform X1 n=3 Tax=Contarinia nasturtii TaxID=265458 RepID=UPI0012D3E522) HSP 1 Score: 58.2 bits (139), Expect = 7.850e-8 Identity = 27/81 (33.33%), Postives = 43/81 (53.09%), Query Frame = 1
Query: 31 DWLSDRDRLVLVHGSGHLPPGVWSRSACVELGLQAGTMLPYAERGRQLGFSVAILNPNARWVAADAPVRHVVSFWDTFLRP 273
D+ + + L L+HGSG + G WSRS + + GT LPY +R LG+ V + N N + P H+++ W+ + P
Sbjct: 146 DFKNTKKLLFLIHGSGVVRAGQWSRSLIINQSINHGTQLPYIKRAISLGYDVLVTNTNQNENLS--PEEHIITVWEQLIAP 224 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127092.5452.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig127092.5452.1 >prot_M-pyrifera_M_contig127092.5452.1 ID=prot_M-pyrifera_M_contig127092.5452.1|Name=mRNA_M-pyrifera_M_contig127092.5452.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=93bp RASTPVLVSADWLSDRDRLVLVHGSGHLPPGVWSRSACVELGLQAGTMLPback to top mRNA from alignment at M-pyrifera_M_contig127092:23..301- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig127092.5452.1 ID=mRNA_M-pyrifera_M_contig127092.5452.1|Name=mRNA_M-pyrifera_M_contig127092.5452.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=279bp|location=Sequence derived from alignment at M-pyrifera_M_contig127092:23..301- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig127092:23..301- >mRNA_M-pyrifera_M_contig127092.5452.1 ID=mRNA_M-pyrifera_M_contig127092.5452.1|Name=mRNA_M-pyrifera_M_contig127092.5452.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=558bp|location=Sequence derived from alignment at M-pyrifera_M_contig127092:23..301- (Macrocystis pyrifera P11B4 male)back to top |