mRNA_M-pyrifera_M_contig12708.5447.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12708.5447.1 vs. uniprot
Match: A0A6H5JQJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQJ8_9PHAE) HSP 1 Score: 387 bits (994), Expect = 2.350e-124 Identity = 276/601 (45.92%), Postives = 313/601 (52.08%), Query Frame = 1
Query: 4 HTSESPSALETRAEGFEKAGDFDGAMEALLAWHSAGSSQAVILAHELSKRHP-GAFQSKGCPV-----RQSVG------PTPTPKPAGADK--------------------ALASSXXXXXXXXXXXXRAAAPSEPLTAPSSVGHSAEQ---SGELASDV--DPARAGEPTIAVAXXXXXXXXXXSDGQT------PWERGWHGPVGFKPPPSNG-----------DTAAAAAA-SVSISPTSEN-APTSMKRGGTSGRRGGSGGNDVRVAWGGNSGSNAAAAGLRNFTVAQLNGFDGSVPVPVSRGGLVRPGKARPVYIALKGKVYDASSGNELYGPGGKYTEFAGHDISRRVARGLAGGSSGKDGSAELDDLTLDGLDRFEQMTLTGWEDMFAARGYPVLGRVVAPPPPRTFSRAELRSFDGRRP-AAEKKGGXXXXXRGRGREGGXEXXXXXXXXXXXXGEAREQRGEXXXXXXXXXXXXQGGGPLQHMPP--------------GYATPPIYLGVKDKVFDVSFGGSEFYVEGGAYECLAGRDASRVLAKMSMTPEDIEGVLDYRNLTDRESKNLADWVEKLGESGRGYPVVGWIDL 1593
H + +ALE RAE E AGD DGAMEALLA H GSS+AV LAHELS+RHP GA CP+ R+ VG +P P+ + A AL S + P E G SGE AS PA T A G+ PWERGW G GFKPPPS+ D A AAA +SP+S + A T ++ +D + G + A RNFTV QLN FDG P RGG R GK RP+YIALKG+VYDAS+G LYGPGG+Y+EFAGHDISRRVA G + S + + LDDL+L+ L RFEQMTL GWED F ARGYP LGRVVAPPPPR FSRAELR+FDGR A + G GRE G EQ P + +PP YA PIY+GVKDKVFDVSFGGSEFY+EGG YECLAGRDASRVLAKMSM EDIEGVLDY LTDRE KNLADWV KLGE G+GYPVVGWIDL
Sbjct: 64 HGCSTAAALEKRAEELEAAGDLDGAMEALLASHDQGSSRAVTLAHELSQRHPVGALGGNRCPLSIRSPRRKVGGGVEAGASPDPEASSAXXXXXXXXXXXAVSVVAPVCAAALTSLASEVLADDNNDGVTSVPEEHCKRSLPSGEERRHVTLSGESASATAAGPASQSAATTATGALEPGKRIDHGGGEPTTTTLLPWERGWQGREGFKPPPSSSALADTGSSASRDAAGTAAAFGAGLSPSSSSFAETGVQ-------------SDDALDVGD---AEATKLARRNFTVRQLNAFDGGCSAPRMRGGEARAGKQRPIYIALKGEVYDASAGRHLYGPGGEYSEFAGHDISRRVAHGAS--HSDRSSNTLLDDLSLENLGRFEQMTLRGWEDTFRARGYPSLGRVVAPPPPRLFSRAELRAFDGRSAHVAGPEYEETERRAGAGREEREVGGGEPGEQVAALGRHEEQ-------------------PAESLPPEQEAKATANAVCFSNYAARPIYMGVKDKVFDVSFGGSEFYLEGGPYECLAGRDASRVLAKMSMASEDIEGVLDYSCLTDREEKNLADWVAKLGEGGKGYPVVGWIDL 627
BLAST of mRNA_M-pyrifera_M_contig12708.5447.1 vs. uniprot
Match: D7FRN9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRN9_ECTSI) HSP 1 Score: 322 bits (824), Expect = 9.090e-99 Identity = 186/307 (60.59%), Postives = 201/307 (65.47%), Query Frame = 1
Query: 691 RNFTVAQLNGFDGSVPVPVSRGGLVRPGKARPVYIALKGKVYDASSGNELYGPGGKYTEFAGHDISRRVARGLAGGSSGKDGSAELDDLTLDGLDRFEQMTLTGWEDMFAARGYPVLGRVVAPPPPRTFSRAELRSFDGRRPAAEKKGGXXXXXRGRGREGGXEXXXXXXXXXXXXGEAREQRGEXXXXXXXXXXXXQGGGPLQHMPP--------------GYATPPIYLGVKDKVFDVSFGGSEFYVEGGAYECLAGRDASRVLAKMSMTPEDIEGVLDYRNLTDRESKNLADWVEKLGESGRGY 1569
RNFTV QLN FDG P RGG R K RP+YIALKG+VYDAS+G LYGPGG+Y+EFAGHDISRRVA G + S + S LDDL+L+GL RFEQMTL GWED F ARGYP LGRVVAPPPPR FSRAELR+FDGR PA RG G GG GE EQ Q P + +PP YA PIY+GVKDKVFDVSFGGSEFY+EGG YECLAGRDASRVLAKMSM EDIEGVLDY LTDRE KNLADWVEKLGE G+GY
Sbjct: 34 RNFTVRQLNAFDGGCSAPRMRGGEARAVKQRPIYIALKGEVYDASAGRHLYGPGGEYSEFAGHDISRRVAHGAS--RSDRSSSTLLDDLSLEGLGRFEQMTLRGWEDTFRARGYPSLGRVVAPPPPRLFSRAELRAFDGR-PADVAASEHGETERGAGAGGGEREVGG--------GEPGEQAA---------VLARQEEQPAESLPPEQEAKATANAVYFSNYAAQPIYMGVKDKVFDVSFGGSEFYLEGGPYECLAGRDASRVLAKMSMASEDIEGVLDYSCLTDREEKNLADWVEKLGEGGKGY 320
BLAST of mRNA_M-pyrifera_M_contig12708.5447.1 vs. uniprot
Match: A0A7S1ZS28_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZS28_TRICV) HSP 1 Score: 150 bits (380), Expect = 1.720e-38 Identity = 107/303 (35.31%), Postives = 140/303 (46.20%), Query Frame = 1
Query: 688 LRNFTVAQLNGFDGSVPVPVSRGGLVRPGKARPVYIALKGKVYDASSGNELYGPGGKYTEFAGHDISRRVARGLAGGSSGKDGSAELDDLTLDGLDRFEQMTLTGW-EDMFAARGYPVLGRVVA----PPPPRTFSRAELRSFDGRRPAAEKKGGXXXXXRGRGREGGXEXXXXXXXXXXXXGEAREQRGEXXXXXXXXXXXXQGGGPLQHMPPGYATPPIYLGVKDKVFDVSFGGSEFYVEGGAYECLAGRDASRVLAKMSMTPEDIEGVLDYRNLTDRESKNLADWVEKLGESGRGYPVVG 1581
L NFT QL FDG + G +PVY+++KG VYDAS G LYGPGG + +AG + +ARG S +LD+++ D L EQ L GW E + ++ YPVLGR++ P R S+ EL +DG+ +Q +P GYA PIYL K KV+D+SFGG FY +GGAY C AG+DASR LAKMS+ P D E +L+++E K L DWV K E + YP VG
Sbjct: 16 LNNFTSVQLLHFDGGEDSVGKKKG------EKPVYLSVKGVVYDASKGRHLYGPGGPFEVYAGRECGAALARGSLDQS-------DLDNISCDDLSMNEQTELEGWVERLKSSLCYPVLGRLIPGDALPSEDRVVSKEELAQYDGK--------------------------------------------------------------IQDIPEGYAAAPIYLAAKGKVYDMSFGGVSFYGKGGAYNCFAGKDASRALAKMSLDPADTENT-STSDLSEKEIKVLNDWV-KTFEERKKYPCVG 241
BLAST of mRNA_M-pyrifera_M_contig12708.5447.1 vs. uniprot
Match: A0A7S3Y4U5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4U5_HETAK) HSP 1 Score: 140 bits (352), Expect = 4.330e-34 Identity = 104/304 (34.21%), Postives = 138/304 (45.39%), Query Frame = 1
Query: 691 RNFTVAQLNGFDGSVPVPVSRGGLVRPGKARPVYIALKGKVYDASSGNELYGPGGKYTEFAGHDISRRVARGLAGGSSGKDGSAELDDL---TLDGLDRFEQMTLTGWEDMFAA-RGYPVLGRVVAPPPPRTFSRAELRSFDGRRPAAEKKGGXXXXXRGRGREGGXEXXXXXXXXXXXXGEAREQRGEXXXXXXXXXXXXQGGGPLQHMPPGYATPPIYLGVKDKVFDVSFGGSEFYVEGGAYECLAGRDASRVLAKMSMTPEDIEGVLDYRNLTDRESKNLADWVEKLGESGRGYPVVGWID 1590
RNFT QL +DGS + P+Y+AL+G V+D SS YG G Y FAGHD +R +A+ S E DDL + +G E +L GW F + YP++GRVV PP PR SR EL +E RG+ Q P GYAT PI + VK V+DVSFGG FY+EG AY AG+DASR LAKMS ED+ + ++L+++E K L DW E ++ + YP++G+ D
Sbjct: 65 RNFTFEQLKKYDGSE-------------EDEPIYVALRGVVFDVSSAPTHYGKDGAYNLFAGHDATRNLAKM----------SFEEDDLNKPSTEGFSVSEIDSLDGWYTTFKEYKQYPIVGRVVEPPKPRKISREEL---------------------------------------------QEMRGK------------------QTCPEGYATAPICISVKGNVYDVSFGGVTFYMEGAAYHLFAGKDASRALAKMSFKDEDVNST-ELKDLSEKELKVLDDW-ENTFKNRKKYPIIGFYD 280
BLAST of mRNA_M-pyrifera_M_contig12708.5447.1 vs. uniprot
Match: A0A6H5JR28_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR28_9PHAE) HSP 1 Score: 128 bits (322), Expect = 7.950e-30 Identity = 68/122 (55.74%), Postives = 87/122 (71.31%), Query Frame = 1
Query: 688 LRNFTVAQLNGFDGSVPVPVSRGGLVRPGKARPVYIALKGKVYDASSGNELYGPGGKYTEFAGHDISRRVARGLAGGSSGKDGSAELDDLTLDGLDRFEQMTLTGWEDMFAARGYPVLGRVV 1053
LR+FT+A+LN FDG P+SR K P++I+L G VYDAS+G +YGP G+ FAGHD+SR VARGL +S DG ++LDDL+L GL+R E+MTL GWE+ F A GYPV+GRVV
Sbjct: 177 LRDFTIAELNTFDGGES-PLSR-------KPHPIFISLGGTVYDASNGRGIYGPSGELAAFAGHDVSRWVARGLV--ASKDDGKSDLDDLSLTGLNRIERMTLAGWEERFKACGYPVVGRVV 288
BLAST of mRNA_M-pyrifera_M_contig12708.5447.1 vs. uniprot
Match: A0A7S0CLZ8_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CLZ8_9STRA) HSP 1 Score: 123 bits (309), Expect = 5.090e-28 Identity = 93/278 (33.45%), Postives = 120/278 (43.17%), Query Frame = 1
Query: 787 VYIALKGKVYDASSGNELYGPGGKYTEFAGHDISRRVARGLAGGSSGKDGSAELDDLTLDGLDRFEQMT------LTGWEDMFAA-RGYPVLGRVVA----PPPPRTFSRAELRSFDGRRPAAEKKGGXXXXXRGRGREGGXEXXXXXXXXXXXXGEAREQRGEXXXXXXXXXXXXQGGGPLQHMPPGYATPPIYLGVKDKVFDVSFGGSEFYVEGGAYECLAGRDASRVLAKMSMTPEDIEGVLDYRNLTDRESKNLADWVEKLGESGRGYPVVGWI 1587
VY++L G V+D + G YGPGG Y FAGH+ A+ D+ LD +D E++T L GW + F R YPV G ++ P R S+ E+ DG +P GYA PIY+GV ++VFDVSFGG EFY +GGAYE AG+DASR LAKMS P D D +L+++E K L DWV+ E +GYPVVG I
Sbjct: 89 VYLSLNGTVFDVTEGKNFYGPGGPYELFAGHECGVAFAK------------MSFDNDHLDDMDGCEKLTNSEKHELIGWMEKFTYYRAYPVKGSLIPNNKLSPSDRILSKEEIAKHDGN---------------------------------------------------------------GTVPEGYAVAPIYIGVGERVFDVSFGGVEFYGKGGAYERFAGKDASRALAKMSFDPADTANT-DTSDLSEKELKVLNDWVKTFDER-KGYPVVGKI 289
BLAST of mRNA_M-pyrifera_M_contig12708.5447.1 vs. uniprot
Match: B7GAT1_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GAT1_PHATC) HSP 1 Score: 121 bits (304), Expect = 2.320e-27 Identity = 91/272 (33.46%), Postives = 121/272 (44.49%), Query Frame = 1
Query: 781 RPVYIALKGKVYDASSGNELYGPGGKYTEFAGHDISRRVARGLAGGSSGKDGSAELDDLTLDGLDRFEQMTLTGWEDMFAA-RGYPVLGRVVA----PPPPRTFSRAELRSFDGRRPAAEKKGGXXXXXRGRGREGGXEXXXXXXXXXXXXGEAREQRGEXXXXXXXXXXXXQGGGPLQHMPPGYATPPIYLGVKDKVFDVSFGGSEFYVEGGAYECLAGRDASRVLAKMSMTPEDIEGVLDYRNLTDRESKNLADWVEKLGESGRGYPVVG 1581
+PVY+++ G V+D S G YGP G Y FAG R LA S ++ + D T L+ E+M L GW D F R YP+ GR++ P P R S+ EL +G+ P E GYATPPIY+G DKVFD+SFGG FY EGG Y AG D SR LAKMS+ EDI+ D ++++++ K + DW+ K E + YP+VG
Sbjct: 84 KPVYLSVNGTVFDVSDGRNFYGPDGPYAAFAG----RECGVALAKMSFDEEHLDDFDGCTK--LNPGEKMELEGWIDKFTYYRPYPIKGRLIPDQCMPSPERVLSKEELAKNNGKGPTPE---------------------------------------------------------------GYATPPIYIGAGDKVFDMSFGGVTFYGEGGPYHRFAGYDVSRSLAKMSLDEEDIKNS-DVSDMSEKQLKIMNDWI-KTFEERKSYPLVG 284
BLAST of mRNA_M-pyrifera_M_contig12708.5447.1 vs. uniprot
Match: A0A7S2SXE7_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SXE7_9STRA) HSP 1 Score: 119 bits (298), Expect = 1.650e-26 Identity = 91/298 (30.54%), Postives = 128/298 (42.95%), Query Frame = 1
Query: 691 RNFTVAQLNGFDGSVPVPVSRGGLVRPGKARPVYIALKGKVYDASSGNELYGPGGKYTEFAGHDISRRVARGLAGGSSGKDGSAELDDLTLDGLDRFEQMTLTGWEDMFA-ARGYPVLGRVVAPPPPRTFSRAELRSFDGRRPAAEKKGGXXXXXRGRGREGGXEXXXXXXXXXXXXGEAREQRGEXXXXXXXXXXXXQGGGPLQHMPPGYATPPIYLGVKDKVFDVSFGGSEFYVEGGAYECLAGRDASRVLAKMSMTPEDIEGVLDYRNLTDRESKNLADWVEKLGESGRGYPVVG 1581
R+FT AQL F+G VP GGL+ +Y+A+KG VYD + YGP G Y FAGH+I+R +ARG +LD ++ E L W + + YP+ GR+V PP R+ + EL F GR P G PP+Y+G+K +V DVSFGG + Y G Y L G+D+SR LAK+S+ +D+ D +LT + K L DW +K ++ + YP+VG
Sbjct: 63 RDFTPAQLLRFNG---VPSGDGGLLAQ-DGEKIYVAVKGDVYDVTKAAMFYGPEGPYHVFAGHEITRCLARGTF--------QEDLDRGDVEDCSHAEIDDLENWVTKYKHIKRYPIAGRLVHPPESRSMTMEELSGFTGR---------------------------------------------------------------TQPPKGRVNPPMYIGIKGQVLDVSFGGYDMYKPGAPYNILLGKDSSRALAKVSLDEKDVAS-RDISDLTASQIKVLDDWADKF-KNKKLYPIVG 283
BLAST of mRNA_M-pyrifera_M_contig12708.5447.1 vs. uniprot
Match: A0A7S2R2U9_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R2U9_9STRA) HSP 1 Score: 115 bits (288), Expect = 6.670e-25 Identity = 108/307 (35.18%), Postives = 147/307 (47.88%), Query Frame = 1
Query: 691 RNFTVAQLNGFDGSVP--VPVSRGGLVRPGKARPVYIALKGKVYDASSGNELYGPGGKYTEFAGHDISRRVARGLAGGSSGKDGSAELDDLTLDGLDRFEQMTLTGWEDMFA-ARGYPVLGRVVA----PPPPRTFSRAELRSFDGRRPAAEKKGGXXXXXRGRGREGGXEXXXXXXXXXXXXGEAREQRGEXXXXXXXXXXXXQGGGPLQHMPPGYATPPIYLGVKDKVFDVSFGGSEFYVEGGAYECLAGRDASRVLAKMSMTPEDIEGVLDYRNLTDRESKNLADWVEKLGESGRGYPVVGWID 1590
RNFT QL +DG+V +P + + +PVY++LKG V+D S YGPGG Y FAG + +A+ +S D E D +L L+ E+ L W F R YP++GR+V+ P P R ++ +L + DG XXXXXXXXXXXX G+ +P GY T PIYLGV VFDVSFGG E+Y +G Y AG+D SR LAKMS+ +I+ +L ++E K L DW + R YP+VG ++
Sbjct: 59 RNFTSEQLAYYDGTVDETIPKRKVLVKESDNKKPVYLSLKGIVFDVSEATNFYGPGGPYESFAGRECGMALAKRNMYDASLLD---EAVDSSL--LNEKERTQLAEWIHKFQKVRCYPIMGRLVSSSQLPDPDRLLTKDDLLANDGT----------------------IHXXXXXXXXXXXXXXXXXXXGDVV------------------IPEGYGTVPIYLGVDGTVFDVSFGGLEYYGKGCPYHPFAGKDVSRALAKMSLDVAEIDNCA-VHDLNEKECKTLKDWKTSFQDK-RKYPIVGQLN 318
BLAST of mRNA_M-pyrifera_M_contig12708.5447.1 vs. uniprot
Match: A0A7S3USF5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USF5_HETAK) HSP 1 Score: 98.6 bits (244), Expect = 8.910e-19 Identity = 69/211 (32.70%), Postives = 92/211 (43.60%), Query Frame = 1
Query: 970 LDRFEQMTLTGWEDMFAA-RGYPVLGRVVAPPPPRTFSRAELRSFDGRRPAAEKKGGXXXXXRGRGREGGXEXXXXXXXXXXXXGEAREQRGEXXXXXXXXXXXXQGGGPLQHMPPGYATPPIYLGVKDKVFDVSFGGSEFYVEGGAYECLAGRDASRVLAKMSMTPEDIEGVLDYRNLTDRESKNLADWVEKLGESGRGYPVVGWIDLDV 1599
L + E+ L W ++ + +P+ GR+VAPPP R F++AEL S+ GR+PA P GYA PI +GV +V+DVSFGG +FY EG Y AGRDASR LA++S D+ G + +L ++E LADW R YPVVGW D V
Sbjct: 212 LTKKERRDLRSWHKVYGGYKEFPLAGRLVAPPPARAFAKAELMSYTGRQPA---------------------------------------------------------------PAGYARAPILVGVAGRVYDVSFGGWQFYGEGAPYHLFAGRDASRALARLSFAAADL-GSPELGDLGEKERGVLADWERTFARKKR-YPVVGWYDQAV 357 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12708.5447.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12708.5447.1 >prot_M-pyrifera_M_contig12708.5447.1 ID=prot_M-pyrifera_M_contig12708.5447.1|Name=mRNA_M-pyrifera_M_contig12708.5447.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=536bp SHTSESPSALETRAEGFEKAGDFDGAMEALLAWHSAGSSQAVILAHELSKback to top mRNA from alignment at M-pyrifera_M_contig12708:2225..5944- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12708.5447.1 ID=mRNA_M-pyrifera_M_contig12708.5447.1|Name=mRNA_M-pyrifera_M_contig12708.5447.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3720bp|location=Sequence derived from alignment at M-pyrifera_M_contig12708:2225..5944- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12708:2225..5944- >mRNA_M-pyrifera_M_contig12708.5447.1 ID=mRNA_M-pyrifera_M_contig12708.5447.1|Name=mRNA_M-pyrifera_M_contig12708.5447.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3216bp|location=Sequence derived from alignment at M-pyrifera_M_contig12708:2225..5944- (Macrocystis pyrifera P11B4 male)back to top |