mRNA_M-pyrifera_M_contig127054.5442.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig127054.5442.1 vs. uniprot
Match: A0A0A0DJR5_9SPIO (Acriflavine resistance protein B n=2 Tax=Bacteria TaxID=2 RepID=A0A0A0DJR5_9SPIO) HSP 1 Score: 210 bits (534), Expect = 7.100e-60 Identity = 109/167 (65.27%), Postives = 134/167 (80.24%), Query Frame = 1
Query: 4 HLRSVPEIKEIAAFVGIPSPMDFNGMVRQYYLRAGPHMADLRITLAERNARAQQSHAMLLRLRAALEAIAREHDATVALVEVPPGPPVIATIVAEVYGGETTPYGELQLAAGRVAERLRREPLVVDVDTTVEAPQRKLVFETDKEKAALSGIATGDIAQTVALGTAG 504
+L SVPE+++ AFVG+PSPMDFNGMVR Y+LR G H AD+R+TLA+R R+QQSHA+LLR+R LEAIA ++A + LVEVPPGPPV++TI E+YGG+ TPY LQ AA + +RLRREPLVVDVDT+VEA Q+K+VF DKEKAALSGI T DIA+TV L G
Sbjct: 611 YLNSVPEVRDYTAFVGVPSPMDFNGMVRHYFLRHGAHYADIRVTLADRRRRSQQSHAILLRIRRDLEAIAAGYNARLKLVEVPPGPPVVSTITVELYGGKATPYSALQEAAVVLEDRLRREPLVVDVDTSVEADQQKIVFVPDKEKAALSGIGTEDIARTVMLANRG 777
BLAST of mRNA_M-pyrifera_M_contig127054.5442.1 vs. uniprot
Match: A0A6J4WYP3_9DELT (Acriflavin resistance protein n=1 Tax=Olavius sp. associated proteobacterium Delta 1 TaxID=698986 RepID=A0A6J4WYP3_9DELT) HSP 1 Score: 205 bits (521), Expect = 4.160e-58 Identity = 108/167 (64.67%), Postives = 129/167 (77.25%), Query Frame = 1
Query: 4 HLRSVPEIKEIAAFVGIPSPMDFNGMVRQYYLRAGPHMADLRITLAERNARAQQSHAMLLRLRAALEAIAREHDATVALVEVPPGPPVIATIVAEVYGGETTPYGELQLAAGRVAERLRREPLVVDVDTTVEAPQRKLVFETDKEKAALSGIATGDIAQTVALGTAG 504
+L SVPE+++ +AFVG+PSPMDFNGMVR Y+LR G H AD+R+TLAER R+QQSHA+LLR+R LEAIA A + LVEVPPGPPVI+TI E+YG + TPY LQ AA + RLRREPLVVDVDT+VE Q K++F DKEKAALSGI T DIA+TV L G
Sbjct: 611 YLSSVPEVRDFSAFVGVPSPMDFNGMVRHYFLRYGAHYADIRVTLAERQRRSQQSHAILLRIRRDLEAIAESLKARIKLVEVPPGPPVISTITVELYGTKATPYSALQQAAAVLEGRLRREPLVVDVDTSVEDDQEKIIFVPDKEKAALSGIGTEDIARTVMLANRG 777
BLAST of mRNA_M-pyrifera_M_contig127054.5442.1 vs. uniprot
Match: A0A0S8CJU8_9BACT (Acriflavine resistance protein B (Fragment) n=1 Tax=Nitrospira bacterium SG8_3 TaxID=1704023 RepID=A0A0S8CJU8_9BACT) HSP 1 Score: 201 bits (511), Expect = 6.130e-57 Identity = 105/167 (62.87%), Postives = 127/167 (76.05%), Query Frame = 1
Query: 4 HLRSVPEIKEIAAFVGIPSPMDFNGMVRQYYLRAGPHMADLRITLAERNARAQQSHAMLLRLRAALEAIAREHDATVALVEVPPGPPVIATIVAEVYGGETTPYGELQLAAGRVAERLRREPLVVDVDTTVEAPQRKLVFETDKEKAALSGIATGDIAQTVALGTAG 504
+L+SVPE+++ AFVG+PSPMDFNGMVR YYLR G H AD+R+TL ER R QQSHA+LLR+R LE IA+ +A + LVEVPPGPPVI+T+ AE+YGG+ TPY LQ A V ERL+RE VVDVDT+V Q K++F DKEKAALSGI T DIA TV+L G
Sbjct: 450 YLKSVPEVRDYTAFVGMPSPMDFNGMVRHYYLRQGAHYADIRVTLVERQRRPQQSHAILLRIRRDLEQIAKASNALIKLVEVPPGPPVISTVTAELYGGKATPYASLQEGAKVVEERLKREAFVVDVDTSVGDDQEKVIFVPDKEKAALSGIGTEDIAATVSLANQG 616
BLAST of mRNA_M-pyrifera_M_contig127054.5442.1 vs. uniprot
Match: A0A7V7DX79_9DELT (Efflux RND transporter permease subunit n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V7DX79_9DELT) HSP 1 Score: 200 bits (509), Expect = 1.770e-56 Identity = 104/167 (62.28%), Postives = 127/167 (76.05%), Query Frame = 1
Query: 4 HLRSVPEIKEIAAFVGIPSPMDFNGMVRQYYLRAGPHMADLRITLAERNARAQQSHAMLLRLRAALEAIAREHDATVALVEVPPGPPVIATIVAEVYGGETTPYGELQLAAGRVAERLRREPLVVDVDTTVEAPQRKLVFETDKEKAALSGIATGDIAQTVALGTAG 504
+LR+VPE+ E AFVG+PSPMDFNGMVR YY R G H AD+R+TLA+R RAQQSH++LLR+R LE IA +DA + LVEVPPGPPVI+TI E+YG + TPY LQ AA + RL++EP VVDVDT+V Q+K++F DKEKAALSGI T DIAQT+ L G
Sbjct: 611 YLRNVPEVNEYTAFVGVPSPMDFNGMVRHYYQRQGAHYADIRVTLAQRQRRAQQSHSILLRIRKDLERIAHSNDARIMLVEVPPGPPVISTITVELYGKKATPYAALQNAAEILENRLKQEPFVVDVDTSVGDDQQKMIFVPDKEKAALSGIGTEDIAQTIRLANNG 777
BLAST of mRNA_M-pyrifera_M_contig127054.5442.1 vs. uniprot
Match: A0A7Y3DQX1_9DELT (Efflux RND transporter permease subunit n=1 Tax=Desulfobacterales bacterium TaxID=2044940 RepID=A0A7Y3DQX1_9DELT) HSP 1 Score: 192 bits (487), Expect = 5.040e-55 Identity = 99/167 (59.28%), Postives = 127/167 (76.05%), Query Frame = 1
Query: 4 HLRSVPEIKEIAAFVGIPSPMDFNGMVRQYYLRAGPHMADLRITLAERNARAQQSHAMLLRLRAALEAIAREHDATVALVEVPPGPPVIATIVAEVYGGETTPYGELQLAAGRVAERLRREPLVVDVDTTVEAPQRKLVFETDKEKAALSGIATGDIAQTVALGTAG 504
+LR VPE+++ AFVG PSPMDFNG+VR YYLR + AD+R+TLA+R R QQSHA+LLR+R LEAIA+ ++A + LVEVPPGPPVI+T+ E+YG + TPY L AA + +RL++EP VVDVDT+VE Q K++F DKEKAALSGI T DIA+T+ L G
Sbjct: 99 YLREVPEVRDYTAFVGEPSPMDFNGLVRHYYLRRAAYTADIRVTLAKRQRRLQQSHAILLRIRRDLEAIAQTYNARIKLVEVPPGPPVISTVAVELYGSKATPYTALMQAAKDLEKRLQQEPFVVDVDTSVEDDQHKIIFVPDKEKAALSGIGTQDIARTIYLANHG 265
BLAST of mRNA_M-pyrifera_M_contig127054.5442.1 vs. uniprot
Match: A0A3A4X7M8_9DELT (Efflux RND transporter permease subunit n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A3A4X7M8_9DELT) HSP 1 Score: 195 bits (496), Expect = 9.940e-55 Identity = 98/167 (58.68%), Postives = 129/167 (77.25%), Query Frame = 1
Query: 4 HLRSVPEIKEIAAFVGIPSPMDFNGMVRQYYLRAGPHMADLRITLAERNARAQQSHAMLLRLRAALEAIAREHDATVALVEVPPGPPVIATIVAEVYGGETTPYGELQLAAGRVAERLRREPLVVDVDTTVEAPQRKLVFETDKEKAALSGIATGDIAQTVALGTAG 504
+L++V E+++ AFVG PSPMDFN MVR YYLR G H AD+R+TLAER+ R++QSH +LLR+R LE IA +A ++LVE PPGPPVI+T+ AE+YG E+TPYG+LQ AA + ERL++EP VVDVDT+ E Q ++VF D+EKAALSG+ T DIA+T+ L G
Sbjct: 586 YLKTVSEVRDYTAFVGAPSPMDFNSMVRHYYLRTGAHYADIRVTLAERSRRSRQSHEILLRIRKDLEKIAGAMNARISLVETPPGPPVISTVTAEIYGRESTPYGDLQTAARTLEERLKKEPFVVDVDTSDEDEQERIVFRPDREKAALSGVGTEDIARTIQLANHG 752
BLAST of mRNA_M-pyrifera_M_contig127054.5442.1 vs. uniprot
Match: UPI0009F4C9D0 (efflux RND transporter permease subunit n=1 Tax=Halofilum ochraceum TaxID=1611323 RepID=UPI0009F4C9D0) HSP 1 Score: 191 bits (486), Expect = 2.290e-53 Identity = 99/168 (58.93%), Postives = 124/168 (73.81%), Query Frame = 1
Query: 1 DHLRSVPEIKEIAAFVGIPSPMDFNGMVRQYYLRAGPHMADLRITLAERNARAQQSHAMLLRLRAALEAIAREHDATVALVEVPPGPPVIATIVAEVYGGETTPYGELQLAAGRVAERLRREPLVVDVDTTVEAPQRKLVFETDKEKAALSGIATGDIAQTVALGTAG 504
D+LR+VPE+++ +VG SPMDFNGM+RQYYLR PH ADLR+TLA R R+QQSH +LLR+R L+ IA H V LVEVPPGPPV+AT+ AE+ G TP+ L A R+A+R+R EP VVDVDT+ A Q + F TDKEKAALSGI+T D+A+T+ LGT G
Sbjct: 608 DYLRTVPEVRDFTGYVGTASPMDFNGMIRQYYLREEPHQADLRVTLAPRARRSQQSHQLLLRIRRDLQGIADRHGVAVKLVEVPPGPPVVATVTAEIRGEAGTPHERLLEGAERLADRMRSEPGVVDVDTSASAEQVRYRFRTDKEKAALSGISTADVARTLRLGTGG 775
BLAST of mRNA_M-pyrifera_M_contig127054.5442.1 vs. uniprot
Match: A0A7Y5ISL5_9BACT (Efflux RND transporter permease subunit n=1 Tax=Candidatus Omnitrophica bacterium TaxID=2035772 RepID=A0A7Y5ISL5_9BACT) HSP 1 Score: 190 bits (483), Expect = 5.800e-53 Identity = 98/166 (59.04%), Postives = 121/166 (72.89%), Query Frame = 1
Query: 7 LRSVPEIKEIAAFVGIPSPMDFNGMVRQYYLRAGPHMADLRITLAERNARAQQSHAMLLRLRAALEAIAREHDATVALVEVPPGPPVIATIVAEVYGGETTPYGELQLAAGRVAERLRREPLVVDVDTTVEAPQRKLVFETDKEKAALSGIATGDIAQTVALGTAG 504
LRS PE++ FVG+P+PMDFNG+VR YYLR G H A++R+ LA + R QSH ++LRLR LEA+A H A + +VE PPGPPVI+T+ EVYG E TPY L A +VAERLRREP VVDVDTTVE +LVF TDKEKAALSG++T DIA+T+ + G
Sbjct: 604 LRSAPEVRNFVQFVGVPAPMDFNGLVRHYYLRQGGHTAEIRVNLAPKAERLHQSHEIVLRLREELEAVAEAHGANIKIVESPPGPPVISTLAVEVYGEEQTPYATLLQGAKQVAERLRREPFVVDVDTTVEEDWEELVFVTDKEKAALSGVSTEDIARTLQIALEG 769
BLAST of mRNA_M-pyrifera_M_contig127054.5442.1 vs. uniprot
Match: A0A0J1KBI6_9GAMM (Acriflavine resistance protein B n=5 Tax=Photobacterium ganghwense TaxID=320778 RepID=A0A0J1KBI6_9GAMM) HSP 1 Score: 190 bits (482), Expect = 8.130e-53 Identity = 99/168 (58.93%), Postives = 122/168 (72.62%), Query Frame = 1
Query: 1 DHLRSVPEIKEIAAFVGIPSPMDFNGMVRQYYLRAGPHMADLRITLAERNARAQQSHAMLLRLRAALEAIAREHDATVALVEVPPGPPVIATIVAEVYGGETTPYGELQLAAGRVAERLRREPLVVDVDTTVEAPQRKLVFETDKEKAALSGIATGDIAQTVALGTAG 504
D+L+SVPE+ ++ F GI SPMDFNGMVR Y++R+ PH +LRI LAE++ R QQSH ++ RLRA L IAR H A + LVEVPPGPPVIAT+VAEVYG T Y ELQ AA RVAERL REPLV + DTT++ F+ D+EKAALSG++ DI QT+A G
Sbjct: 616 DYLKSVPEVVSVSGFAGIASPMDFNGMVRHYFMRSQPHQGELRIVLAEKHQRQQQSHELVTRLRADLTTIARRHKADIQLVEVPPGPPVIATVVAEVYGQPHTSYSELQEAARRVAERLAREPLVAETDTTIQGELMTWQFKVDQEKAALSGVSVNDINQTLAAANVG 783
BLAST of mRNA_M-pyrifera_M_contig127054.5442.1 vs. uniprot
Match: L8JB90_9GAMM (Acriflavin resistance protein n=3 Tax=Photobacterium TaxID=657 RepID=L8JB90_9GAMM) HSP 1 Score: 187 bits (474), Expect = 9.780e-52 Identity = 98/168 (58.33%), Postives = 121/168 (72.02%), Query Frame = 1
Query: 1 DHLRSVPEIKEIAAFVGIPSPMDFNGMVRQYYLRAGPHMADLRITLAERNARAQQSHAMLLRLRAALEAIAREHDATVALVEVPPGPPVIATIVAEVYGGETTPYGELQLAAGRVAERLRREPLVVDVDTTVEAPQRKLVFETDKEKAALSGIATGDIAQTVALGTAG 504
D+L+SVPE+ ++ F GI SPMDFNGMVR Y++R PH +LRI LAE+N R QQSH ++ RLRA L AIA++ DA + LVE PPGPPVIATI+AEVYG TPY ELQ AA VAERL+REP VV+ DT+++ F D EKAALSG++ DI QT+A G
Sbjct: 620 DYLKSVPEVVSVSGFAGIASPMDFNGMVRHYFMRTMPHQGELRIVLAEKNRRRQQSHELVTRLRADLTAIAQKLDADIQLVETPPGPPVIATIIAEVYGQPQTPYHELQTAAVNVAERLKREPFVVETDTSIQGELESWQFIVDSEKAALSGVSVQDINQTLAAANIG 787 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127054.5442.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig127054.5442.1 >prot_M-pyrifera_M_contig127054.5442.1 ID=prot_M-pyrifera_M_contig127054.5442.1|Name=mRNA_M-pyrifera_M_contig127054.5442.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=168bp DHLRSVPEIKEIAAFVGIPSPMDFNGMVRQYYLRAGPHMADLRITLAERNback to top mRNA from alignment at M-pyrifera_M_contig127054:2..505+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig127054.5442.1 ID=mRNA_M-pyrifera_M_contig127054.5442.1|Name=mRNA_M-pyrifera_M_contig127054.5442.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=504bp|location=Sequence derived from alignment at M-pyrifera_M_contig127054:2..505+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig127054:2..505+ >mRNA_M-pyrifera_M_contig127054.5442.1 ID=mRNA_M-pyrifera_M_contig127054.5442.1|Name=mRNA_M-pyrifera_M_contig127054.5442.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1008bp|location=Sequence derived from alignment at M-pyrifera_M_contig127054:2..505+ (Macrocystis pyrifera P11B4 male)back to top |