mRNA_M-pyrifera_M_contig127051.5440.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig127051.5440.1
Unique NamemRNA_M-pyrifera_M_contig127051.5440.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig127051.5440.1 vs. uniprot
Match: A0A433BAJ5_9FUNG (Protein kinase domain-containing protein n=3 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433BAJ5_9FUNG)

HSP 1 Score: 104 bits (259), Expect = 6.900e-24
Identity = 52/99 (52.53%), Postives = 72/99 (72.73%), Query Frame = 1
Query:   13 SSHSRTTGIGTAGYASPEQLRKDV--YDEKTDIYSLGIILLELYYPFVTRMERAKVIDGLRTRRQLPLALLKKFPEVGRIIIWLTEENPAHRPSSAELL 303
            S+ +RTTG+GT  YASPEQL      Y+EK+D+YSLGIIL EL+YPF T MERA+ + GLR R  LP   ++++P+   +I+W+  E+PA RPS+ +LL
Sbjct:  555 STSTRTTGVGTVTYASPEQLANPPCPYNEKSDVYSLGIILFELFYPFATAMERAQALRGLR-RGVLPERFVQRWPKESALILWMMAEDPAQRPSAKQLL 652          
BLAST of mRNA_M-pyrifera_M_contig127051.5440.1 vs. uniprot
Match: A0A367K1B2_RHIST (Eukaryotic translation initiation factor 2-alpha kinase (Fragment) n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367K1B2_RHIST)

HSP 1 Score: 102 bits (254), Expect = 2.750e-23
Identity = 50/94 (53.19%), Postives = 66/94 (70.21%), Query Frame = 1
Query:   25 RTTGIGTAGYASPEQLRKDVYDEKTDIYSLGIILLELYYPFVTRMERAKVIDGLRTRRQLPLALLKKFPEVGRIIIWLTEENPAHRPSSAELLR 306
            RT G+GT  YASPEQL    YDEK DIYSLGIIL EL+ PF T MERA+ +D L+ R   P   L  +P+V  +I+W+ + +P+HRPS+ +LL+
Sbjct:  384 RTIGVGTRTYASPEQLAAQNYDEKVDIYSLGIILFELFQPFSTGMERAEALDKLK-RGVFPEGFLDLYPKVTALILWMMDMDPSHRPSAHQLLQ 476          
BLAST of mRNA_M-pyrifera_M_contig127051.5440.1 vs. uniprot
Match: A0A152A268_9MYCE (Protein kinase domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A268_9MYCE)

HSP 1 Score: 102 bits (254), Expect = 3.260e-23
Identity = 50/93 (53.76%), Postives = 70/93 (75.27%), Query Frame = 1
Query:   28 TTGIGTAGYASPEQLRKDVYDEKTDIYSLGIILLELYYPFVTRMERAKVIDGLRTRRQLPLALLKKFPEVGRIIIWLTEENPAHRPSSAELLR 306
            T+ +GT  Y+SPEQ +K +Y+EKTDIYSLGIIL ELYYPF TRME+A+V+  LR R  LP + L+K P+V  +++ +   NP  RPS+A++L+
Sbjct:  620 TSAVGTMTYSSPEQ-KKGLYNEKTDIYSLGIILFELYYPFSTRMEKARVLSDLRNRI-LPKSFLQKHPKVADLVLSMMRPNPDERPSAADILK 710          
BLAST of mRNA_M-pyrifera_M_contig127051.5440.1 vs. uniprot
Match: A0A8H7RL06_9FUNG (Protein kinase domain-containing protein (Fragment) n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7RL06_9FUNG)

HSP 1 Score: 95.9 bits (237), Expect = 5.470e-23
Identity = 48/96 (50.00%), Postives = 65/96 (67.71%), Query Frame = 1
Query:   22 SRTTGIGTAGYASPEQLRKDV--YDEKTDIYSLGIILLELYYPFVTRMERAKVIDGLRTRRQLPLALLKKFPEVGRIIIWLTEENPAHRPSSAELL 303
            SRT+G+GT  YA+PEQ+      YDEK DIYSLGIIL ELY PF T MERA  ID L+ + Q P   ++K+P   +II+ +  ++P  RP++ E+L
Sbjct:   34 SRTSGVGTRTYAAPEQIAIPTLAYDEKADIYSLGIILFELYRPFSTAMERADAIDKLKRKGQFPAHFVEKYPTQSQIILSMMNKDPCLRPTALEIL 129          
BLAST of mRNA_M-pyrifera_M_contig127051.5440.1 vs. uniprot
Match: Q54CT9_DICDI (Protein kinase domain-containing protein (Fragment) n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54CT9_DICDI)

HSP 1 Score: 98.2 bits (243), Expect = 1.160e-22
Identity = 47/93 (50.54%), Postives = 70/93 (75.27%), Query Frame = 1
Query:   28 TTGIGTAGYASPEQLRKDVYDEKTDIYSLGIILLELYYPFVTRMERAKVIDGLRTRRQLPLALLKKFPEVGRIIIWLTEENPAHRPSSAELLR 306
            T+ +GT  Y+SPEQ +K +Y+EKTDIYSLGIIL ELY+P  TRME+A+V+  LR    LP + L+K+P+V  +I+ + + NP  RPS++++L+
Sbjct:   76 TSAVGTLTYSSPEQ-KKGLYNEKTDIYSLGIILFELYFPISTRMEKARVLTDLRNG-VLPKSFLQKYPKVSELILLMMKTNPDERPSASDILK 166          
BLAST of mRNA_M-pyrifera_M_contig127051.5440.1 vs. uniprot
Match: A0A5N4CXV7_CAMDR (Eukaryotic translation initiation factor 2-alpha kinase 1 n=1 Tax=Camelus dromedarius TaxID=9838 RepID=A0A5N4CXV7_CAMDR)

HSP 1 Score: 95.9 bits (237), Expect = 1.260e-22
Identity = 51/93 (54.84%), Postives = 65/93 (69.89%), Query Frame = 1
Query:   28 TTGIGTAGYASPEQLRKDVYDEKTDIYSLGIILLELYYPFVTRMERAKVIDGLRTRRQLPLALLKKFPEVGRIIIWLTEENPAHRPSSAELLR 306
            T+ +GT  YASPEQL    YD K+D+YSLG+ILLEL+ PF T MERAKV+ GLRT  Q+P +L K  P   + I  LT +N A RPS+ +LL+
Sbjct:   47 TSRVGTCLYASPEQLEGSEYDAKSDMYSLGVILLELFQPFGTEMERAKVLTGLRTG-QIPDSLGKMCPVQAKYIQHLTRKNSAQRPSAVQLLQ 138          
BLAST of mRNA_M-pyrifera_M_contig127051.5440.1 vs. uniprot
Match: UPI0009E2906D (eukaryotic translation initiation factor 2-alpha kinase 1-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E2906D)

HSP 1 Score: 100 bits (248), Expect = 2.100e-22
Identity = 49/92 (53.26%), Postives = 65/92 (70.65%), Query Frame = 1
Query:   28 TTGIGTAGYASPEQLRKDVYDEKTDIYSLGIILLELYYPFVTRMERAKVIDGLRTRRQLPLALLKKFPEVGRIIIWLTEENPAHRPSSAELL 303
            T G+GT  YASPEQLR ++YD K DIYSLGIIL EL+ PF T MER K I  LR  R LP    +++PE  ++I+ + +ENP++RP++  LL
Sbjct:  536 TAGVGTCTYASPEQLRNNIYDNKADIYSLGIILFELFCPFGTEMERVKNIKDLRQGR-LPQDFCEQWPEESKLILKMIDENPSNRPTAESLL 626          
BLAST of mRNA_M-pyrifera_M_contig127051.5440.1 vs. uniprot
Match: A0A8H7BRY2_9FUNG (Eukaryotic translation initiation factor 2-alpha kinase n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BRY2_9FUNG)

HSP 1 Score: 99.8 bits (247), Expect = 2.870e-22
Identity = 47/95 (49.47%), Postives = 66/95 (69.47%), Query Frame = 1
Query:   25 RTTGIGTAGYASPEQLR--KDVYDEKTDIYSLGIILLELYYPFVTRMERAKVIDGLRTRRQLPLALLKKFPEVGRIIIWLTEENPAHRPSSAELL 303
            RT G+GT  YASPEQ+      YDEK DIYSLGII  ELY PF T MERA+ +D ++ R   P   ++K+P+   +I+W+ ++NP+HRP++ +LL
Sbjct:  582 RTIGVGTRTYASPEQMAIPAQPYDEKVDIYSLGIIFFELYQPFATGMERAETLDRIK-RGVFPNGFVEKYPKESALILWMMDKNPSHRPTARQLL 675          
BLAST of mRNA_M-pyrifera_M_contig127051.5440.1 vs. uniprot
Match: A0A8J4V3M7_9MYCE (Protein kinase domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4V3M7_9MYCE)

HSP 1 Score: 99.8 bits (247), Expect = 2.890e-22
Identity = 49/93 (52.69%), Postives = 70/93 (75.27%), Query Frame = 1
Query:   28 TTGIGTAGYASPEQLRKDVYDEKTDIYSLGIILLELYYPFVTRMERAKVIDGLRTRRQLPLALLKKFPEVGRIIIWLTEENPAHRPSSAELLR 306
            T+ +GT  Y+SPEQ +K +Y+EKTDIYSLGIIL ELYYPF TRME+A+V+  LR    LP   L+K+P+V   I+++ + NP  RPS++++L+
Sbjct:  638 TSAVGTLTYSSPEQ-KKGLYNEKTDIYSLGIILFELYYPFSTRMEKARVLTDLRNG-VLPKQFLQKYPKVSHWILFMMKLNPDERPSASDILK 728          
BLAST of mRNA_M-pyrifera_M_contig127051.5440.1 vs. uniprot
Match: A0A3M6UZT1_POCDA (Protein kinase domain-containing protein n=3 Tax=Pocilloporidae TaxID=46729 RepID=A0A3M6UZT1_POCDA)

HSP 1 Score: 99.0 bits (245), Expect = 5.330e-22
Identity = 50/92 (54.35%), Postives = 62/92 (67.39%), Query Frame = 1
Query:   28 TTGIGTAGYASPEQLRKDVYDEKTDIYSLGIILLELYYPFVTRMERAKVIDGLRTRRQLPLALLKKFPEVGRIIIWLTEENPAHRPSSAELL 303
            T G+GT  YASPEQLR ++YD K DIYSLGIIL ELY PF T MER K I  LR  R LP    +K+PE  ++I+ +  EN  +RP++  LL
Sbjct:  535 TAGVGTCTYASPEQLRNNIYDNKADIYSLGIILFELYCPFGTEMERVKSIKDLRQGR-LPEDFCEKWPEESKLILEMVAENSGNRPTAESLL 625          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127051.5440.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A433BAJ5_9FUNG6.900e-2452.53Protein kinase domain-containing protein n=3 Tax=J... [more]
A0A367K1B2_RHIST2.750e-2353.19Eukaryotic translation initiation factor 2-alpha k... [more]
A0A152A268_9MYCE3.260e-2353.76Protein kinase domain-containing protein n=1 Tax=T... [more]
A0A8H7RL06_9FUNG5.470e-2350.00Protein kinase domain-containing protein (Fragment... [more]
Q54CT9_DICDI1.160e-2250.54Protein kinase domain-containing protein (Fragment... [more]
A0A5N4CXV7_CAMDR1.260e-2254.84Eukaryotic translation initiation factor 2-alpha k... [more]
UPI0009E2906D2.100e-2253.26eukaryotic translation initiation factor 2-alpha k... [more]
A0A8H7BRY2_9FUNG2.870e-2249.47Eukaryotic translation initiation factor 2-alpha k... [more]
A0A8J4V3M7_9MYCE2.890e-2252.69Protein kinase domain-containing protein n=1 Tax=P... [more]
A0A3M6UZT1_POCDA5.330e-2254.35Protein kinase domain-containing protein n=3 Tax=P... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig127051contigM-pyrifera_M_contig127051:201..506 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score98.6
Seed ortholog evalue1.8e-18
Seed eggNOG ortholog44689.DDB0302693
KEGG koko:K08860,ko:K16196
KEGG Pathwayko04137,ko04138,ko04140,ko04141,ko04210,ko04214,ko04932,ko05010,ko05160,ko05162,ko05164,ko05168,ko05169,map04137,map04138,map04140,map04141,map04210,map04214,map04932,map05010,map05160,map05162,map05164,map05168,map05169
Hectar predicted targeting categoryother localisation
EggNOG free text desc.eukaryotic translation initiation factor 2alpha kinase activity
EggNOG OGsCOG0124@1,KOG1035@2759
EC2.7.11.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Exons1
Model size306
Cds size306
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815784.0266612-CDS-M-pyrifera_M_contig127051:200..5061622815784.0266612-CDS-M-pyrifera_M_contig127051:200..506Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig127051 201..506 +
1692277567.720413-CDS-M-pyrifera_M_contig127051:200..5061692277567.720413-CDS-M-pyrifera_M_contig127051:200..506Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig127051 201..506 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig127051.5440.1prot_M-pyrifera_M_contig127051.5440.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig127051 201..506 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig127051.5440.1

>prot_M-pyrifera_M_contig127051.5440.1 ID=prot_M-pyrifera_M_contig127051.5440.1|Name=mRNA_M-pyrifera_M_contig127051.5440.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=102bp
RRAASSHSRTTGIGTAGYASPEQLRKDVYDEKTDIYSLGIILLELYYPFV
TRMERAKVIDGLRTRRQLPLALLKKFPEVGRIIIWLTEENPAHRPSSAEL
LR
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mRNA from alignment at M-pyrifera_M_contig127051:201..506+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig127051.5440.1 ID=mRNA_M-pyrifera_M_contig127051.5440.1|Name=mRNA_M-pyrifera_M_contig127051.5440.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=306bp|location=Sequence derived from alignment at M-pyrifera_M_contig127051:201..506+ (Macrocystis pyrifera P11B4 male)
CGGCGTGCAGCGAGCAGCCACTCGCGGACGACTGGCATTGGCACTGCGGG GTATGCCAGCCCCGAGCAGCTGCGCAAGGATGTGTACGACGAGAAGACGG ACATCTACAGCCTGGGCATCATCCTGCTGGAGCTGTACTATCCCTTCGTG ACACGCATGGAGCGGGCCAAGGTCATCGACGGCTTGCGGACGCGGCGGCA GCTGCCGCTGGCCCTCCTGAAGAAGTTCCCCGAGGTGGGCCGCATCATCA TCTGGCTCACCGAGGAGAACCCTGCCCACCGCCCCTCCTCTGCAGAGCTG CTGCGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig127051:201..506+

>mRNA_M-pyrifera_M_contig127051.5440.1 ID=mRNA_M-pyrifera_M_contig127051.5440.1|Name=mRNA_M-pyrifera_M_contig127051.5440.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=612bp|location=Sequence derived from alignment at M-pyrifera_M_contig127051:201..506+ (Macrocystis pyrifera P11B4 male)
CGGCGTGCAGCGAGCAGCCACTCGCGGACGACTGGCATTGGCACTGCGGG
GTATGCCAGCCCCGAGCAGCTGCGCAAGGATGTGTACGACGAGAAGACGG
ACATCTACAGCCTGGGCATCATCCTGCTGGAGCTGTACTATCCCTTCGTG
ACACGCATGGAGCGGGCCAAGGTCATCGACGGCTTGCGGACGCGGCGGCA
GCTGCCGCTGGCCCTCCTGAAGAAGTTCCCCGAGGTGGGCCGCATCATCA
TCTGGCTCACCGAGGAGAACCCTGCCCACCGCCCCTCCTCTGCAGAGCTG
CTGCGCCGGCGTGCAGCGAGCAGCCACTCGCGGACGACTGGCATTGGCAC
TGCGGGGTATGCCAGCCCCGAGCAGCTGCGCAAGGATGTGTACGACGAGA
AGACGGACATCTACAGCCTGGGCATCATCCTGCTGGAGCTGTACTATCCC
TTCGTGACACGCATGGAGCGGGCCAAGGTCATCGACGGCTTGCGGACGCG
GCGGCAGCTGCCGCTGGCCCTCCTGAAGAAGTTCCCCGAGGTGGGCCGCA
TCATCATCTGGCTCACCGAGGAGAACCCTGCCCACCGCCCCTCCTCTGCA
GAGCTGCTGCGC
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