mRNA_M-pyrifera_M_contig12694.5429.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12694.5429.1 vs. uniprot
Match: D7G1I7_ECTSI (Protein HGH1 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1I7_ECTSI) HSP 1 Score: 280 bits (715), Expect = 4.790e-89 Identity = 145/175 (82.86%), Postives = 157/175 (89.71%), Query Frame = 1
Query: 1 GGITRKLVEEMVPFLRDPRPEIRQAAAATAVAASASKAGVTLLHQCGAVKWLCRISGDVGTIAKDAVSALVNVSAEETSVAALEDMCKASIVSRMMEAASDEACLPAMRDLCLQLLANVTRVQLGAEKVAQVGVAGGA-KEGQYIRKLARWLVLHPAEEGLPYPALVGTSREDVR 522
G ITR+L+EE VPFLRDPRPEIRQAAAATAVAASA+K GV LLH+CGAVKWLCRISGDVGTI KDAVS LVNVSAEETSVAALEDMCKA IV+RMMEA SDE C+P MRDLCLQLLANVTRVQ+GA K+AQVGVAGGA +EGQYIR+LARWL HPA+ GLPYP LVG SR+D R
Sbjct: 53 GSITRELIEETVPFLRDPRPEIRQAAAATAVAASATKEGVALLHKCGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIVNRMMEAVSDEQCIPFMRDLCLQLLANVTRVQVGATKLAQVGVAGGALREGQYIRRLARWLAKHPADNGLPYPVLVGGSRDDAR 227
BLAST of mRNA_M-pyrifera_M_contig12694.5429.1 vs. uniprot
Match: A0A835YVT2_9STRA (DUF383 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVT2_9STRA) HSP 1 Score: 124 bits (312), Expect = 1.700e-30 Identity = 71/147 (48.30%), Postives = 101/147 (68.71%), Query Frame = 1
Query: 22 VEEMVPFLRDPRPEIRQAAAATAVAASASKAGVTLLHQCGAVKWLCRISGDVGTIAKDAVSALVNVSAEETSVAALEDMCKASIVSRMMEAASDEA--CLPAMRDLCLQLLANVTRVQLGAEKVAQVGVAGGAKEGQYIRKLARWLV 456
V E+VPFLRD RP++R+AAA T + +A++ G +L++ GAV WLC++ GDV IAKD+++AL+N A+ AA E M + IV+ +ME D++ C P RDLCL LLANVT + G E++ Q+G GG EG ++R+LAR LV
Sbjct: 8 VAEIVPFLRDSRPDLRKAAANTCMQLAATEEGRLMLYEAGAVPWLCKLVGDVDAIAKDSITALINTGADVP--AATEQMVNSGIVNSVMEVVVDQSQDCTPRRRDLCLTLLANVTTTEPGVERMLQLGGKGGP-EGLHVRRLARALV 151
BLAST of mRNA_M-pyrifera_M_contig12694.5429.1 vs. uniprot
Match: A0A1V9Z507_9STRA (Protein HGH1 homolog n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z507_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 3.250e-13 Identity = 56/132 (42.42%), Postives = 78/132 (59.09%), Query Frame = 1
Query: 22 VEEMVPFLRDPRPEIRQAAAATAVAASASKAGVTLLHQCGAVKWLCRISGDVGTIAKDAVSALVNVSAEETSVAALEDMCKASIVSRMMEAASDEACLPAMRDLCLQLLANVTRVQLGAEKVAQVGVAGGAK 417
++E+V FL PR ++RQ+A A+ +A+ AGV L + AVK LCR+ DV TIA+DA+ ALVN++A T A E K IV+R+M + A +DL + LLANVT GA+ + VA AK
Sbjct: 6 MQELVGFLSSPRADLRQSAMQLALGLTATDAGVLSLIKADAVKALCRLVSDVNTIARDAIHALVNMTA--THPVACETALKFDIVNRLMNQLDSDF---AHKDLSMMLLANVTTTPDGAKAL----VANDAK 128
BLAST of mRNA_M-pyrifera_M_contig12694.5429.1 vs. uniprot
Match: A0A6G0XMQ5_9STRA (Protein HGH1 homolog n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XMQ5_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 4.670e-13 Identity = 54/153 (35.29%), Postives = 83/153 (54.25%), Query Frame = 1
Query: 22 VEEMVPFLRDPRPEIRQAAAATAVAASASKAGVTLLHQCGAVKWLCRISGDVGTIAKDAVSALVNVSAEETSVAALEDMCKASIVSRMMEAASDEACLPAMRDLCLQLLANVTRVQLGAEKVAQVGVAGGAKEGQYIRKLARWLVLHPAEEGL 480
V+E+V FL +PR ++RQ+A V + S G+ L + AVK LCR+ GD+ IA+DA+ ALVN++A T A E+ K +IV+R+M + +DL + LLANVT GA+ + A+E + +L P +G+
Sbjct: 9 VKELVEFLSNPRADVRQSAIQLVVGLTGSDNGIQQLVKADAVKALCRMIGDLNAIARDAIHALVNITA--THPGACENALKHNIVNRLMNQLDSDF---QHKDLSMMLLANVTTTPEGAKALVTNDAKYSAREIILQKLTVNFLESEPEPDGI 156
BLAST of mRNA_M-pyrifera_M_contig12694.5429.1 vs. uniprot
Match: A0A024UB25_9STRA (Protein HGH1 homolog n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UB25_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 6.270e-13 Identity = 54/153 (35.29%), Postives = 82/153 (53.59%), Query Frame = 1
Query: 22 VEEMVPFLRDPRPEIRQAAAATAVAASASKAGVTLLHQCGAVKWLCRISGDVGTIAKDAVSALVNVSAEETSVAALEDMCKASIVSRMMEAASDEACLPAMRDLCLQLLANVTRVQLGAEKVAQVGVAGGAKEGQYIRKLARWLVLHPAEEGL 480
V+E+V FL +PR ++RQ+A V + + +G+ L + AVK LCR+ GD+ IA+DA+ ALVN++A T A E+ K IV+R+M + +DL + LLANVT GA+ + +E R+L P +GL
Sbjct: 7 VKELVEFLSNPRADVRQSAIQLTVGLTGTDSGIQQLIKADAVKALCRLIGDLNAIARDAIHALVNITA--THPGACENALKHDIVNRLMNQLDSDF---QHKDLSVMLLANVTTTPDGAKALVTNDAKYSVREVILQNLTIRFLESEPEPDGL 154
BLAST of mRNA_M-pyrifera_M_contig12694.5429.1 vs. uniprot
Match: A0A067D6J1_SAPPC (Protein HGH1 homolog n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D6J1_SAPPC) HSP 1 Score: 74.7 bits (182), Expect = 1.550e-12 Identity = 55/130 (42.31%), Postives = 76/130 (58.46%), Query Frame = 1
Query: 28 EMVPFLRDPRPEIRQAAAATAVAASASKAGVTLLHQCGAVKWLCRISGDVGTIAKDAVSALVNVSAEETSVAALEDMCKASIVSRMMEAASDEACLPAMRDLCLQLLANVTRVQLGAEKVAQVGVAGGAK 417
E+V FL PR ++RQ+A A+ +A+ AGV L + AVK LCR+ DV TIA+DA+ ALVN++A T A E + IV+R+M + A +DL + LLANVT GA+ + VA AK
Sbjct: 8 ELVGFLSSPRADLRQSAMQLALGLTATDAGVHQLIKADAVKALCRLVSDVNTIARDAIHALVNITA--THPVACESALQFDIVNRLMNQLDSDF---AHKDLSMMLLANVTTTPDGAKAL----VANDAK 128
BLAST of mRNA_M-pyrifera_M_contig12694.5429.1 vs. uniprot
Match: W4FY03_9STRA (Protein HGH1 homolog n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FY03_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 1.600e-12 Identity = 54/155 (34.84%), Postives = 82/155 (52.90%), Query Frame = 1
Query: 16 KLVEEMVPFLRDPRPEIRQAAAATAVAASASKAGVTLLHQCGAVKWLCRISGDVGTIAKDAVSALVNVSAEETSVAALEDMCKASIVSRMMEAASDEACLPAMRDLCLQLLANVTRVQLGAEKVAQVGVAGGAKEGQYIRKLARWLVLHPAEEGL 480
K V E+V FL +PR ++RQ+A V + + +G+ L + AVK LCR+ GD+ IA+DA+ ALVN++A T A E+ K IV+R+M + +DL + LLANVT GA+ + +E R+L P +G+
Sbjct: 5 KEVTELVEFLSNPRADVRQSAIQLTVGLTGTDSGIQQLIKADAVKALCRLIGDMNAIARDAIHALVNITA--THHGACENALKHDIVNRLMNQLDSDF---QHKDLSVMLLANVTTTPEGAKALVINDAKYSVREVILQNLTVRFLESEPEPDGI 154
BLAST of mRNA_M-pyrifera_M_contig12694.5429.1 vs. uniprot
Match: A0A485KTU3_9STRA (Protein HGH1 homolog n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KTU3_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 1.040e-11 Identity = 52/153 (33.99%), Postives = 81/153 (52.94%), Query Frame = 1
Query: 22 VEEMVPFLRDPRPEIRQAAAATAVAASASKAGVTLLHQCGAVKWLCRISGDVGTIAKDAVSALVNVSAEETSVAALEDMCKASIVSRMMEAASDEACLPAMRDLCLQLLANVTRVQLGAEKVAQVGVAGGAKEGQYIRKLARWLVLHPAEEGL 480
V+E+V FL +PR ++RQ+A V + + +GV L + AVK LCR+ GD+ IA+DA+ ALVN++A T A E+ IV+R+M + +DL + LLANVT GA+ + +E + +L P +G+
Sbjct: 7 VKELVEFLSNPRADVRQSAIQLTVGLTGTDSGVQQLVKADAVKALCRLIGDMNAIARDAIHALVNITA--THPGACENALNHDIVNRLMNQLDSDF---QHKDLSMMLLANVTTTVEGAKALVSHDAKYSVREVILQKLTVAFLEGEPEPDGI 154
BLAST of mRNA_M-pyrifera_M_contig12694.5429.1 vs. uniprot
Match: A0A7S1GBR0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GBR0_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 3.430e-10 Identity = 40/109 (36.70%), Postives = 64/109 (58.72%), Query Frame = 1
Query: 142 AVKWLCRISGDVGTIAKDAVSALVNVSAEETSVAALEDMCKASIVSRMMEAASDEACLPAMRDLCLQLLANVTRVQLGAEKVAQVGVAGGAKE----GQYIRKLARWLV 456
A+ LC++ GDV +IA A+SAL+N+S + S L+ M K+ +V ++ME +DE C R L + LLAN+T+ G+ ++ VG A + G ++RKL W +
Sbjct: 25 AIPQLCKLVGDVNSIATRAISALINLSNDSMS---LDRMNKSFVVPKLMEGLADEGCKH--RRLSVMLLANLTKTPAGSNQLLGVGAGAEAADSVLVGMHVRKLVAWFL 128
BLAST of mRNA_M-pyrifera_M_contig12694.5429.1 vs. uniprot
Match: A0A2R5GBR8_9STRA (Protein HGH1 homolog n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GBR8_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.160e-8 Identity = 61/180 (33.89%), Postives = 93/180 (51.67%), Query Frame = 1
Query: 22 VEEMVPFLRDPRPEIRQAAAATAVAASASKAGVTLLHQC-----GAVKWLCRISGDVGTIAKDAVSALVNVSAEETSVAALEDMCKASIVSRMME---------AASD----EACLPAMRDLCLQLLANVTRVQLGAEKVAQVGVAGGAKEGQYIRKLARWLVLHPAEEGLPYPALVGTS 507
VEE+V FLR PRP++R+ AA T + + + AGV LL + L R+ GD IA A +ALVN+S + + AAL + K ++ S ++E A+ D E +PA C++LL+N+T GA ++ + G G G ++ L R + PAE +P LV T+
Sbjct: 4 VEELVGFLRAPRPDVRKQAAETVLQLTGTDAGVVLLLSTHGDDKDVLTLLARLVGDQEQIASPAAAALVNMSTNDRANAALVE--KKALWSSLLETLKGLQDATASGDGMKTEKPVPAQLKTCVKLLSNLTTSVAGANRLIE-GRLGRDYAGLDVKLLLRAFLRAPAE--IPEAGLVLTN 178 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12694.5429.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12694.5429.1 >prot_M-pyrifera_M_contig12694.5429.1 ID=prot_M-pyrifera_M_contig12694.5429.1|Name=mRNA_M-pyrifera_M_contig12694.5429.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=164bp MVPFLRDPRPEIRQAAAATAVAASASKAGVTLLHQCGAVKWLCRISGDVGback to top mRNA from alignment at M-pyrifera_M_contig12694:307..8627+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12694.5429.1 ID=mRNA_M-pyrifera_M_contig12694.5429.1|Name=mRNA_M-pyrifera_M_contig12694.5429.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8321bp|location=Sequence derived from alignment at M-pyrifera_M_contig12694:307..8627+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12694:307..8627+ >mRNA_M-pyrifera_M_contig12694.5429.1 ID=mRNA_M-pyrifera_M_contig12694.5429.1|Name=mRNA_M-pyrifera_M_contig12694.5429.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=984bp|location=Sequence derived from alignment at M-pyrifera_M_contig12694:307..8627+ (Macrocystis pyrifera P11B4 male)back to top |