mRNA_M-pyrifera_M_contig126916.5423.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig126916.5423.1 vs. uniprot
Match: UPI00201FA0F3 (uncharacterized protein LOC124131564 isoform X1 n=2 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201FA0F3) HSP 1 Score: 151 bits (381), Expect = 3.350e-39 Identity = 72/170 (42.35%), Postives = 94/170 (55.29%), Query Frame = 1
Query: 1 GYFCE--EVTVAPEECPAGTYNPHYGGVSEEEDCLPCPAGSYCEVASANI-TGVCARGYFCPEGSVSPMERECPAKYYNAHEGARKQSDCALCTSGDYCPTNATVTPVECPTGSYCVTGVDEPEPCPPGSYGNTSGLRRAEDCSPCQPGTYCAGWGLTEPSGECRAGYYC 501
G++C +V P CP GT+NP YG + DC+ C GSYC + G C GY+CP G+ +P CP +Y DC C SG YC TP+ CP G +CV+G P+PCP G+YGN++ LRR+ DC+PC G YC G G EP+ C AG+YC
Sbjct: 2768 GHYCPAGDVNPYPVPCPNGTFNPDYGR-KQVSDCVQCTPGSYCIPEGLSTPAGDCPGGYYCPLGTAAPESYPCPIGFYRNGSARESFQDCTECISGFYCDREGLATPISCPRGYFCVSGSTFPQPCPLGTYGNSTELRRSTDCTPCPGGYYCDGIGRVEPTDVCDAGFYC 2936
BLAST of mRNA_M-pyrifera_M_contig126916.5423.1 vs. uniprot
Match: UPI0018F5A97B (multiple epidermal growth factor-like domains protein 6 n=1 Tax=Scyliorhinus canicula TaxID=7830 RepID=UPI0018F5A97B) HSP 1 Score: 149 bits (376), Expect = 1.390e-38 Identity = 72/175 (41.14%), Postives = 94/175 (53.71%), Query Frame = 1
Query: 1 GYFCEEVTVAPEE--CPAGTYNPHYGGVSEEEDCLPCPAGSYC------EVASANITGVCARGYFCPEGSVSPMERECPAKYYNAHEGARKQSDCALCTSGDYCPTNATVTPVECPTGSYCVTGVDEPEPCPPGSYGNTSGLRRAEDCSPCQPGTYCAGWGLTEPSGECRAGYYC 501
GY+C + + P CP GTY G V + + C+PCPAG YC VA TG C G++CP G+ P C +Y H A ++ +C+ C G YC T P CP G YC+ G +P+PC PG+Y N GL CSPC G YC GLT+P+G C+AG+YC
Sbjct: 101 GYYCLQGNIDPNPRACPNGTYGDQEGLVDKSQ-CVPCPAGEYCYTEGTKPVAITQPTGRCPGGHYCPLGTGDPYTFPCAPGFYRTHSSAERKDNCSHCPPGHYCDTFGLEEPKVCPEGFYCIKGSKKPQPCEPGTYSNRIGLGAFSGCSPCGGGQYCTDEGLTQPTGYCKAGFYC 274
BLAST of mRNA_M-pyrifera_M_contig126916.5423.1 vs. uniprot
Match: UPI001EE5DD0F (LOW QUALITY PROTEIN: uncharacterized protein LOC124282469 n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE5DD0F) HSP 1 Score: 149 bits (376), Expect = 1.580e-38 Identity = 75/171 (43.86%), Postives = 95/171 (55.56%), Query Frame = 1
Query: 1 GYFCE--EVTVAPEECPAGTYNPHYGGVSEEEDCLPCPAGSYC--EVASANITGVCARGYFCPEGSVSPMERECPAKYYNAHEGARKQSDCALCTSGDYCPTNATVTPVECPTGSYCVTGVDEPEPCPPGSYGNTSGLRRAEDCSPCQPGTYCAGWGLTEPSGECRAGYYC 501
G++C +V P CP GTYNP +G + DC+ C GSYC E SA G C GY+CP G+ P CP +Y DC C SG YC TP+ CP G +CV+G P+PCP G+YGN++ LRR+ DC+PC G YC G G EP+ C AG+YC
Sbjct: 2718 GHYCPAGDVNPYPVPCPNGTYNPDFGR-KQVSDCVQCTPGSYCIPEGLSAPA-GDCPGGYYCPLGTGPPESYPCPIGFYRNGSARESFQDCTECISGFYCDREGLATPISCPRGFFCVSGSTFPQPCPLGTYGNSTELRRSTDCTPCPGGYYCDGIGRVEPTDVCDAGFYC 2886
BLAST of mRNA_M-pyrifera_M_contig126916.5423.1 vs. uniprot
Match: A0A401RYP6_CHIPU (Uncharacterized protein n=1 Tax=Chiloscyllium punctatum TaxID=137246 RepID=A0A401RYP6_CHIPU) HSP 1 Score: 148 bits (374), Expect = 2.870e-38 Identity = 71/175 (40.57%), Postives = 97/175 (55.43%), Query Frame = 1
Query: 1 GYFCEEVTVAPEE--CPAGTYNPHYGGVSEEEDCLPCPAGSYC------EVASANITGVCARGYFCPEGSVSPMERECPAKYYNAHEGARKQSDCALCTSGDYCPTNATVTPVECPTGSYCVTGVDEPEPCPPGSYGNTSGLRRAEDCSPCQPGTYCAGWGLTEPSGECRAGYYC 501
GY+C + + P CP GTY+ G V E + C+PCPAG YC VA + TG C G++CP G+ +P C +Y +H A ++ C+ C G YC + P CP G YC+ G +P+PC G+Y + LR DC PC G YCAG LT+P+G C+AG+YC
Sbjct: 298 GYYCLQGNIDPNPRACPNGTYSDRKGLVDESQ-CVPCPAGKYCYSEGTKPVAISQPTGDCPGGHYCPLGTGNPHTFPCKPGFYLSHSAAEREESCSQCPPGYYCESFGLENPKVCPKGFYCILGSKQPQPCQRGTYSDKMSLRALSDCIPCGGGQYCAGESLTQPTGNCKAGFYC 471
BLAST of mRNA_M-pyrifera_M_contig126916.5423.1 vs. uniprot
Match: UPI000359E1C1 (uncharacterized protein LOC101861715 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI000359E1C1) HSP 1 Score: 148 bits (373), Expect = 3.990e-38 Identity = 69/170 (40.59%), Postives = 95/170 (55.88%), Query Frame = 1
Query: 1 GYFCEEVTVAPE--ECPAGTYNPHYGGVSEEEDCLPCPAGSYCEVASANI-TGVCARGYFCPEGSVSPMERECPAKYYNAHEGARKQSDCALCTSGDYCPTNATVTPVECPTGSYCVTGVDEPEPCPPGSYGNTSGLRRAEDCSPCQPGTYCAGWGLTEPSGECRAGYYC 501
GY+C ++P +CP GTYNP G + + DC+ C G YC+ + G C G++CP G+ + CP +Y DC C SG YC P++CP G +CV+G P+PCP G+Y N++GLRR+ DC+PC G YC G G TEP+G C G+YC
Sbjct: 1768 GYYCPAGNISPYPVKCPIGTYNPDTGRKTVD-DCVQCTPGMYCDSEGLSAPAGDCPGGHYCPLGTGASTSFPCPIGFYRNSSARESFQDCTECISGYYCDVEGLAVPIDCPPGYFCVSGSITPQPCPLGTYSNSTGLRRSTDCTPCPGGQYCDGIGRTEPAGLCDPGFYC 1936
BLAST of mRNA_M-pyrifera_M_contig126916.5423.1 vs. uniprot
Match: UPI001B7E219B (SCO-spondin n=1 Tax=Polyodon spathula TaxID=7913 RepID=UPI001B7E219B) HSP 1 Score: 145 bits (367), Expect = 2.530e-37 Identity = 77/173 (44.51%), Postives = 94/173 (54.34%), Query Frame = 1
Query: 1 GYFCE--EVTVAPEECPAGTYNPHYGGVSEEEDCLPCPAGSYCEVASANI---TGVCARGYFCPEGSVSPMEREC-PAKYYNAHEGARKQSDCALCTSGDYCPTNATVTPVECPTGSYCVTGVDEPEPCPPGSYGNTSGLRRAEDCSPCQPGTYCAGWGLTEPSGECRAGYYC 501
GY+C ++ P CP GTY+ G + E C PCPAG YC S I TG C GY CP G+ P C P Y N+ G R ++ C C +G YC + AT P CP G +CV G PEPC G+Y LR +C+PC G YCAG GLTEP+G C AG+YC
Sbjct: 198 GYYCPGGDIDPNPRLCPNGTYSDRQG-LREVSACTPCPAGQYCFSKSQGISRPTGSCPSGYHCPVGTGYPYSFPCTPGSYRNSSLGHRGET-CQPCPAGFYCASQATEIPTICPRGYFCVEGSSSPEPCEEGTYSARPALRAGSECAPCVGGWYCAGVGLTEPTGSCEAGFYC 368
BLAST of mRNA_M-pyrifera_M_contig126916.5423.1 vs. uniprot
Match: A0A8B6FW71_MYTGA (Uncharacterized protein (Fragment) n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6FW71_MYTGA) HSP 1 Score: 145 bits (365), Expect = 4.740e-37 Identity = 71/170 (41.76%), Postives = 94/170 (55.29%), Query Frame = 1
Query: 1 GYFCE--EVTVAPEECPAGTYNPHYGGVSEEEDCLPCPAGSYCEVASANI-TGVCARGYFCPEGSVSPMERECPAKYYNAHEGARKQSDCALCTSGDYCPTNATVTPVECPTGSYCVTGVDEPEPCPPGSYGNTSGLRRAEDCSPCQPGTYCAGWGLTEPSGECRAGYYC 501
G++C +V P CP GT+N YG +++ +C C AG YC + G C GY+CP G+ P CP +Y DCA C SG YC P++CP G +CV+G P+PCP G+Y N++ LRRA DC+PC G YC G G TEP+ C AG+YC
Sbjct: 1419 GHYCPRGDVNPYPVPCPNGTFNALYG-LTQVSECQQCTAGMYCIPEGLSTPAGDCPGGYYCPLGTGPPETYPCPIGFYRNGSAKESFQDCAECISGYYCDREGLALPIDCPAGYFCVSGSTFPQPCPLGTYSNSTKLRRATDCTPCPGGYYCDGIGRTEPTDVCDAGFYC 1587
BLAST of mRNA_M-pyrifera_M_contig126916.5423.1 vs. uniprot
Match: R7TS72_CAPTE (Chitin-binding type-2 domain-containing protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7TS72_CAPTE) HSP 1 Score: 143 bits (360), Expect = 2.230e-36 Identity = 68/170 (40.00%), Postives = 91/170 (53.53%), Query Frame = 1
Query: 1 GYFCE--EVTVAPEECPAGTYNPHYGGVSEEEDCLPCPAGSYCEVASANI-TGVCARGYFCPEGSVSPMERECPAKYYNAHEGARKQSDCALCTSGDYCPTNATVTPVECPTGSYCVTGVDEPEPCPPGSYGNTSGLRRAEDCSPCQPGTYCAGWGLTEPSGECRAGYYC 501
G++C +++ P CP GT+N YG + + +C C G YC G C+ GY+CP G+ P CP +Y DCA CTSG YC P +CP G +CV G P+PCP G+Y N++ LRR DC+PC G YC G GLT P+ C AG++C
Sbjct: 1358 GHYCPRGDISPCPVPCPNGTFNEIYG-LMQVSECQQCTPGEYCIPEGLEAPAGPCSGGYYCPLGTGEPYSYPCPVGFYRNSSARESFQDCAECTSGYYCDVEGLAIPKDCPAGYFCVAGSTFPQPCPLGTYTNSTNLRRDTDCTPCPGGYYCDGIGLTSPTDVCDAGFFC 1526
BLAST of mRNA_M-pyrifera_M_contig126916.5423.1 vs. uniprot
Match: A0A2T7NFW9_POMCA (Uncharacterized protein n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NFW9_POMCA) HSP 1 Score: 143 bits (360), Expect = 2.230e-36 Identity = 69/170 (40.59%), Postives = 89/170 (52.35%), Query Frame = 1
Query: 1 GYFCE--EVTVAPEECPAGTYNPHYGGVSEEEDCLPCPAGSYCEVAS-ANITGVCARGYFCPEGSVSPMERECPAKYYNAHEGARKQSDCALCTSGDYCPTNATVTPVECPTGSYCVTGVDEPEPCPPGSYGNTSGLRRAEDCSPCQPGTYCAGWGLTEPSGECRAGYYC 501
GY+C V P+ CP GTYN G + DC+ C G YC + + G C GY+CP G+ CP +Y DC C SG YC P+ CP G +CV+G P+PCP G+Y N++GLRR+ DC+PC G YC G G T P+G C G+YC
Sbjct: 1729 GYYCPAGNVQPLPQPCPGGTYNAETGRM-RVSDCVQCTPGKYCYPSGLSQPAGDCPGGYYCPLGTAESNSFPCPIGFYRNGSAKESFEDCTECISGYYCDREGLAQPIACPPGYFCVSGSTFPQPCPLGTYSNSTGLRRSTDCTPCPGGYYCDGIGRTAPTGLCDPGFYC 1897
BLAST of mRNA_M-pyrifera_M_contig126916.5423.1 vs. uniprot
Match: UPI000D730558 (uncharacterized protein LOC112553744 isoform X1 n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D730558) HSP 1 Score: 143 bits (360), Expect = 2.230e-36 Identity = 69/170 (40.59%), Postives = 89/170 (52.35%), Query Frame = 1
Query: 1 GYFCE--EVTVAPEECPAGTYNPHYGGVSEEEDCLPCPAGSYCEVAS-ANITGVCARGYFCPEGSVSPMERECPAKYYNAHEGARKQSDCALCTSGDYCPTNATVTPVECPTGSYCVTGVDEPEPCPPGSYGNTSGLRRAEDCSPCQPGTYCAGWGLTEPSGECRAGYYC 501
GY+C V P+ CP GTYN G + DC+ C G YC + + G C GY+CP G+ CP +Y DC C SG YC P+ CP G +CV+G P+PCP G+Y N++GLRR+ DC+PC G YC G G T P+G C G+YC
Sbjct: 1729 GYYCPAGNVQPLPQPCPGGTYNAETGRM-RVSDCVQCTPGKYCYPSGLSQPAGDCPGGYYCPLGTAESNSFPCPIGFYRNGSAKESFEDCTECISGYYCDREGLAQPIACPPGYFCVSGSTFPQPCPLGTYSNSTGLRRSTDCTPCPGGYYCDGIGRTAPTGLCDPGFYC 1897 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126916.5423.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig126916.5423.1 >prot_M-pyrifera_M_contig126916.5423.1 ID=prot_M-pyrifera_M_contig126916.5423.1|Name=mRNA_M-pyrifera_M_contig126916.5423.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=167bp GYFCEEVTVAPEECPAGTYNPHYGGVSEEEDCLPCPAGSYCEVASANITGback to top mRNA from alignment at M-pyrifera_M_contig126916:3..503- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig126916.5423.1 ID=mRNA_M-pyrifera_M_contig126916.5423.1|Name=mRNA_M-pyrifera_M_contig126916.5423.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=501bp|location=Sequence derived from alignment at M-pyrifera_M_contig126916:3..503- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig126916:3..503- >mRNA_M-pyrifera_M_contig126916.5423.1 ID=mRNA_M-pyrifera_M_contig126916.5423.1|Name=mRNA_M-pyrifera_M_contig126916.5423.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1002bp|location=Sequence derived from alignment at M-pyrifera_M_contig126916:3..503- (Macrocystis pyrifera P11B4 male)back to top |