mRNA_M-pyrifera_M_contig126910.5421.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig126910.5421.1 vs. uniprot
Match: A0A2E8FK65_9PLAN (Ribosomal RNA small subunit methyltransferase E n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8FK65_9PLAN) HSP 1 Score: 157 bits (396), Expect = 3.580e-45 Identity = 88/157 (56.05%), Postives = 108/157 (68.79%), Query Frame = 1
Query: 19 PVITLATAVPKSDRFRWLVEKATELGVRRLIPVRTERSVVHPGDGKLEKMQAASIAACKQCGRNDLLVIQPVQDWTEMLH-QTAQLPKLIAHPEGQPMRESLAAINREP--QVVLIVGPEGGLSDGEIELARAAGGEVVHLGRSILRIETAALSMVA 480
P + LATA+PK DRFR LVEK TELG+ RLIP+RT+RSVVHPG GK +KM A IAACKQCGRN L+ I+PV W EML A L +IAHP P E+L + +P +V VGPEGG S+ E++ A AG V LG +LRIETAA+++ A
Sbjct: 75 PELVLATAIPKGDRFRSLVEKTTELGIDRLIPLRTDRSVVHPGKGKCQKMNHAVIAACKQCGRNRLMAIEPVTAWREMLAIDNAAL--IIAHPGESPAAETLDQVLSDPPGSLVFCVGPEGGWSETELQAAGNAGAVRVSLGPHVLRIETAAIALAA 229
BLAST of mRNA_M-pyrifera_M_contig126910.5421.1 vs. uniprot
Match: A0A518CSQ1_9PLAN (Ribosomal RNA small subunit methyltransferase E n=1 Tax=Polystyrenella longa TaxID=2528007 RepID=A0A518CSQ1_9PLAN) HSP 1 Score: 151 bits (382), Expect = 4.760e-43 Identity = 77/153 (50.33%), Postives = 102/153 (66.67%), Query Frame = 1
Query: 25 ITLATAVPKSDRFRWLVEKATELGVRRLIPVRTERSVVHPGDGKLEKMQAASIAACKQCGRNDLLVIQPVQDWTEMLHQ-TAQLPKLIAHPEGQPMRESLAAINREPQVVLIVGPEGGLSDGEIELARAAGGEVVHLGRSILRIETAALSMVA 480
I LA A PK DRFRWLVEKATELGV + P++TERSVV PG GK++K++ IAACKQCGRN L+ Q W E + + TA LIAHP G +RE+ + +++ +GPEGG ++ E+ LA AG + LG++ILR ETAA++ A
Sbjct: 79 IVLAVAPPKGDRFRWLVEKATELGVSAIQPLKTERSVVDPGAGKIDKLRQTMIAACKQCGRNQLMTFAQQQTWEECIQEYTASHHLLIAHPHGHNLREAFIGVEPTRSLLIAIGPEGGFTEEEVSLALNAGAAPISLGQNILRTETAAITCAA 231
BLAST of mRNA_M-pyrifera_M_contig126910.5421.1 vs. uniprot
Match: A0A2E0SN93_9PLAN (Ribosomal RNA small subunit methyltransferase E n=1 Tax=Planctomyces sp. TaxID=37635 RepID=A0A2E0SN93_9PLAN) HSP 1 Score: 150 bits (379), Expect = 3.130e-42 Identity = 78/153 (50.98%), Postives = 100/153 (65.36%), Query Frame = 1
Query: 25 ITLATAVPKSDRFRWLVEKATELGVRRLIPVRTERSVVHPGDGKLEKMQAASIAACKQCGRNDLLVIQPVQDWTEMLHQTAQLPK-LIAHPEGQPMRESLAAINREPQVVLIVGPEGGLSDGEIELARAAGGEVVHLGRSILRIETAALSMVA 480
I LA A PK DRFRWLVEKATELG+ LIPV TER+VV PG GKL+K+Q +AACKQCGRN + +P W + + Q LIAHP G +R++ I ++L VGPEGG ++ E+ +A AG E V LG ++LR ETAA++ A
Sbjct: 110 IILAVAPPKGDRFRWLVEKATELGMDTLIPVETERTVVSPGSGKLDKLQQTMVAACKQCGRNQFMKFEPPISWQQCVDQYRNSHTILIAHPNGDHLRDAFREIEPTRHLLLAVGPEGGFTEEEVAIALRAGAEQVSLGTNLLRTETAAITFAA 262
BLAST of mRNA_M-pyrifera_M_contig126910.5421.1 vs. uniprot
Match: UPI00029B3D8B (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=UPI00029B3D8B) HSP 1 Score: 146 bits (368), Expect = 5.800e-41 Identity = 82/164 (50.00%), Postives = 107/164 (65.24%), Query Frame = 1
Query: 1 KDPLIQPVITLATAVPKSDRFRWLVEKATELGVRRLIPVRTERSVVHPGDGKLEKMQAASIAACKQCGRNDLLVIQPVQDWTEMLHQ---TAQLPKLIAHPEGQPMR-ESLAAINREPQVVLIVGPEGGLSDGEIELARAAGGEVVHLGRSILRIETAALSMVA 480
+DP+ ++TLAT VPK DRF WL+EKATELGV R+IP+ T RSVV P D KL+K++ I ACKQ G+N L+ I PV WTE L A+L LIAHP G + S A + ++ +GPEGG SD E++ A G +++ LG ILRIETAAL++ A
Sbjct: 69 RDPVPLTLLTLATGVPKGDRFEWLIEKATELGVARVIPLTTTRSVVDPRDSKLDKLRQTVITACKQSGQNHLMEITPVVAWTEFLRDHDPAAEL--LIAHPRGADVGLVSEDAKSSSRAIIAAIGPEGGFSDDEVQSAVTHGAKIIRLGPRILRIETAALALAA 230
BLAST of mRNA_M-pyrifera_M_contig126910.5421.1 vs. uniprot
Match: A0A517ZU46_9PLAN (Ribosomal RNA small subunit methyltransferase E n=3 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZU46_9PLAN) HSP 1 Score: 145 bits (366), Expect = 1.230e-40 Identity = 88/153 (57.52%), Postives = 102/153 (66.67%), Query Frame = 1
Query: 25 ITLATAVPKSDRFRWLVEKATELGVRRLIPVRTERSVVHPGDGKLEKMQAASIAACKQCGRNDLLVIQPVQDWTEMLHQT-AQLPKLIAHPEGQPMRESLAAINREPQVVLIVGPEGGLSDGEIELARAAGGEVVHLGRSILRIETAALSMVA 480
+ LATAVPK DRFRWLVEKATELGV RL+P++TERSVV P KLEKM+AA IAA KQC R L+ I P+Q+W E L A P LIAHP G R A R + +GPEGG S+ EI A A +V LG ILRIETAAL++VA
Sbjct: 79 LILATAVPKGDRFRWLVEKATELGVTRLVPLQTERSVVDPRATKLEKMRAAVIAASKQCRRARLMEITPLQNWAEFLTSLPAGDPLLIAHPGGTAWRADWVAGERP--TTICIGPEGGFSEAEISHANARA-TLVDLGPRILRIETAALALVA 228
BLAST of mRNA_M-pyrifera_M_contig126910.5421.1 vs. uniprot
Match: A0A2E7RZD5_9PLAN (Ribosomal RNA small subunit methyltransferase E n=2 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7RZD5_9PLAN) HSP 1 Score: 145 bits (366), Expect = 2.660e-40 Identity = 81/156 (51.92%), Postives = 105/156 (67.31%), Query Frame = 1
Query: 19 PVITLATAVPKSDRFRWLVEKATELGVRRLIPVRTERSVVHPGDGKLEKMQAASIAACKQCGRNDLLVIQPVQDWTEMLHQTAQLPKLIAHPEGQPMRESLAAINREPQV--VLIVGPEGGLSDGEIELARAAGGEVVHLGRSILRIETAALSMVA 480
P + LATAVPK DR R LVEKATELG+ R++P++T+RSVVHP GK +KM A IAACKQCGRN L+ I P+ W E+L Q +I + ES+A + P + VL VGPEGG +DGE++ AR A ++ +GR LRIETAAL++ A
Sbjct: 101 PEVVLATAVPKGDRIRSLVEKATELGIDRMVPLKTQRSVVHPRVGKQKKMHHAVIAACKQCGRNRLMRIDPLMTWDELLAVENQ-SLVIGQQGAENSGESIARLLAAPHMPLVLCVGPEGGWTDGELDAAREAKATLIGVGRHTLRIETAALALAA 255
BLAST of mRNA_M-pyrifera_M_contig126910.5421.1 vs. uniprot
Match: UPI00141ED5EB (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI00141ED5EB) HSP 1 Score: 144 bits (363), Expect = 3.380e-40 Identity = 83/165 (50.30%), Postives = 108/165 (65.45%), Query Frame = 1
Query: 4 DPLIQPVITLATAVPKSDRFRWLVEKATELGVRRLIPVRTERSVVHPGDGKLEKMQAASIAACKQCGRNDLLVIQPVQDWTEMLHQTAQLPKL---IAHPEGQPMRESLAAINREPQV---VLIVGPEGGLSDGEIELARAAGGEVVHLGRSILRIETAALSMVA 480
+P+ P +TLA A PK DRFRWLVEKATELGV +LIP+ T R VV+P DGKL+KM+ IAACKQ RN L+ I W E+L + +PK +AHP G + A N E ++++GPEGGL++GE++ A AAG + LG ILRIETAAL++ A
Sbjct: 71 EPITTPTLTLAVAPPKGDRFRWLVEKATELGVDQLIPLETRRGVVNPRDGKLDKMRQTVIAACKQSRRNRLMEITAPTAWDELLEKW--VPKCTCWVAHPTGTDWQ----AANWETDAAEHLIVIGPEGGLTNGEVDQAMAAGATPISLGPRILRIETAALAVAA 229
BLAST of mRNA_M-pyrifera_M_contig126910.5421.1 vs. uniprot
Match: A0A3D1DK09_9PLAN (Ribosomal RNA small subunit methyltransferase E n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3D1DK09_9PLAN) HSP 1 Score: 144 bits (363), Expect = 4.190e-40 Identity = 82/157 (52.23%), Postives = 106/157 (67.52%), Query Frame = 1
Query: 19 PVITLATAVPKSDRFRWLVEKATELGVRRLIPVRTERSVVHPGDGKLEKMQAASIAACKQCGRNDLLVIQPVQDWTEML---HQTAQLPKLIAHPEGQPMRESLAAINREPQVVLIVGPEGGLSDGEIELARAAGGEVVHLGRSILRIETAALSMVA 480
P + LATAVPK DR R LVEKATELG+ RL+P++T RSVVHP GK +KMQ A +AACKQCGRN L+ I P+ W E+L +Q+ + + A GQ + LA N +VL VGPEGG +D E++ AR A ++ +GR LRIETAAL++ A
Sbjct: 79 PEVVLATAVPKGDRIRSLVEKATELGIDRLVPLKTHRSVVHPRVGKQKKMQQAVLAACKQCGRNRLMRIDPLMAWDELLAVENQSLVIGQRGAEDSGQAIDRLLADPNTP--LVLCVGPEGGWTDEELDAAREAKATLIGVGRHTLRIETAALALAA 233
BLAST of mRNA_M-pyrifera_M_contig126910.5421.1 vs. uniprot
Match: L0DAQ3_SINAD (Ribosomal RNA small subunit methyltransferase E n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) TaxID=886293 RepID=L0DAQ3_SINAD) HSP 1 Score: 143 bits (361), Expect = 7.950e-40 Identity = 76/149 (51.01%), Postives = 100/149 (67.11%), Query Frame = 1
Query: 25 ITLATAVPKSDRFRWLVEKATELGVRRLIPVRTERSVVHPGDGKLEKMQAASIAACKQCGRNDLLVIQPVQDWTEMLHQTAQLPKLIAHPEGQPMRESLAAINRE-PQVVLIVGPEGGLSDGEIELARAAGGEVVHLGRSILRIETAAL 468
+TLATAVPK +RF WL+EKATELGV RL+P+ TERSVV P D KLE+++ + A KQCGRN L+ ++ W+ +L +L+AHP G P + N + V L VGPEGG SD E++ A+A+G +V LG +ILRIETA L
Sbjct: 78 LTLATAVPKGERFDWLIEKATELGVTRLVPIITERSVVDPRDAKLERLRRRVVEASKQCGRNRLMEVERPTPWSTLLKSVEDDVRLMAHPNGSPRGRWPRSRNGQGASVTLAVGPEGGFSDVEVDEAQASGWSIVGLGPTILRIETAGL 226
BLAST of mRNA_M-pyrifera_M_contig126910.5421.1 vs. uniprot
Match: UPI00126110BB (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Tautonia marina TaxID=2653855 RepID=UPI00126110BB) HSP 1 Score: 142 bits (358), Expect = 1.760e-39 Identity = 75/149 (50.34%), Postives = 101/149 (67.79%), Query Frame = 1
Query: 25 ITLATAVPKSDRFRWLVEKATELGVRRLIPVRTERSVVHPGDGKLEKMQAASIAACKQCGRNDLLVIQPVQDWTEMLHQTAQLPKLIAHPEGQPMRESLAAINREPQVVLIVGPEGGLSDGEIELARAAGGEVVHLGRSILRIETAALS 471
I LATAVPK DRF WL+EKATELGV R+IP+RT+RSVV P KL++++ I ACKQ GR+ LL I+P+ W ++L + +LIAHP G E++ V+L +GPEGG SD E+E + G + ++LG +ILRIETA L+
Sbjct: 77 IALATAVPKGDRFDWLIEKATELGVHRVIPLRTQRSVVDPRTTKLDRLRRLVIEACKQSGRDRLLHIEPMLSWPDLLATYTEGVRLIAHPGG----EAIGRCGTIATVILAIGPEGGFSDEEVEQGQELGWKTINLGPNILRIETAGLA 221 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126910.5421.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig126910.5421.1 >prot_M-pyrifera_M_contig126910.5421.1 ID=prot_M-pyrifera_M_contig126910.5421.1|Name=mRNA_M-pyrifera_M_contig126910.5421.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=160bp KDPLIQPVITLATAVPKSDRFRWLVEKATELGVRRLIPVRTERSVVHPGDback to top mRNA from alignment at M-pyrifera_M_contig126910:28..507+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig126910.5421.1 ID=mRNA_M-pyrifera_M_contig126910.5421.1|Name=mRNA_M-pyrifera_M_contig126910.5421.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=480bp|location=Sequence derived from alignment at M-pyrifera_M_contig126910:28..507+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig126910:28..507+ >mRNA_M-pyrifera_M_contig126910.5421.1 ID=mRNA_M-pyrifera_M_contig126910.5421.1|Name=mRNA_M-pyrifera_M_contig126910.5421.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=960bp|location=Sequence derived from alignment at M-pyrifera_M_contig126910:28..507+ (Macrocystis pyrifera P11B4 male)back to top |