mRNA_M-pyrifera_M_contig126842.5398.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig126842.5398.1
Unique NamemRNA_M-pyrifera_M_contig126842.5398.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig126842.5398.1 vs. uniprot
Match: A0A356X2D4_9BACT (Por_Secre_tail domain-containing protein (Fragment) n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A356X2D4_9BACT)

HSP 1 Score: 124 bits (310), Expect = 1.910e-33
Identity = 61/85 (71.76%), Postives = 72/85 (84.71%), Query Frame = 1
Query:   55 FALSQNYPNPFNPTTKIEFSIEQSGHVKLEVFSTTGQKVAELINGLTTAGSHSVGFDASLLSSGIYIYRIVTQHGILSRKMILVK 309
            F LSQNYPNPFNPTT IE+SIE++GHVKLEV++ TGQKVAEL+N   +AG  SV FDAS LSSG+YIYRI+T  G+LSRKM L+K
Sbjct:  124 FELSQNYPNPFNPTTNIEYSIERAGHVKLEVYNITGQKVAELVNARQSAGVKSVQFDASHLSSGLYIYRIITPSGMLSRKMTLIK 208          
BLAST of mRNA_M-pyrifera_M_contig126842.5398.1 vs. uniprot
Match: A0A2D9FQ52_9BACT (Por_Secre_tail domain-containing protein n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A2D9FQ52_9BACT)

HSP 1 Score: 117 bits (294), Expect = 4.000e-29
Identity = 58/85 (68.24%), Postives = 70/85 (82.35%), Query Frame = 1
Query:   55 FALSQNYPNPFNPTTKIEFSIEQSGHVKLEVFSTTGQKVAELINGLTTAGSHSVGFDASLLSSGIYIYRIVTQHGILSRKMILVK 309
            F LSQNYPNPFNPTT IE+S E++G VKLEV++ TGQKVAEL+N   +AG  SV FDAS LSSG+YIYRI+T  G+LSRK+ L+K
Sbjct:  364 FELSQNYPNPFNPTTNIEYSTERAGQVKLEVYNITGQKVAELVNARQSAGVKSVQFDASHLSSGLYIYRIITPSGMLSRKLTLIK 448          
BLAST of mRNA_M-pyrifera_M_contig126842.5398.1 vs. uniprot
Match: A0A521F1V8_9BACT (Por secretion system C-terminal sorting domain-containing protein n=2 Tax=Gracilimonas mengyeensis TaxID=1302730 RepID=A0A521F1V8_9BACT)

HSP 1 Score: 117 bits (292), Expect = 7.720e-29
Identity = 59/103 (57.28%), Postives = 78/103 (75.73%), Query Frame = 1
Query:    1 VYTQNTNTPPQKQEKVRKFALSQNYPNPFNPTTKIEFSIEQSGHVKLEVFSTTGQKVAELINGLTTAGSHSVGFDASLLSSGIYIYRIVTQHGILSRKMILVK 309
            VY +  NT  + Q++V  F L+QNYPNPFNPTT+IE++I   G V+LEVF+  GQ+VAEL+NG  +AG  SV FDAS LSSG+YIYR+ T  G L++KM+L+K
Sbjct:  346 VYDEMLNTSSEPQQQVSGFELAQNYPNPFNPTTQIEYTINMPGEVRLEVFTMAGQRVAELVNGRQSAGVKSVQFDASGLSSGMYIYRLQTAQGTLAKKMMLIK 448          
BLAST of mRNA_M-pyrifera_M_contig126842.5398.1 vs. uniprot
Match: A0A6A8Q3R8_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6A8Q3R8_9BACT)

HSP 1 Score: 116 bits (291), Expect = 1.080e-28
Identity = 58/103 (56.31%), Postives = 75/103 (72.82%), Query Frame = 1
Query:    1 VYTQNTNTPPQKQEKVRKFALSQNYPNPFNPTTKIEFSIEQSGHVKLEVFSTTGQKVAELINGLTTAGSHSVGFDASLLSSGIYIYRIVTQHGILSRKMILVK 309
            VY   T T  + ++    F L QNYPNPFNPTT I+FS+ ++G V L +F+ TGQKVAELIN    AG HSV FDAS+L+SG+YIYR+ T+HG  ++KMIL+K
Sbjct:  347 VYDDMTTTSTETEDIATHFTLEQNYPNPFNPTTNIKFSLARAGKVSLTIFTATGQKVAELINDYRPAGVHSVHFDASVLASGVYIYRVGTEHGSQAKKMILLK 449          
BLAST of mRNA_M-pyrifera_M_contig126842.5398.1 vs. uniprot
Match: A0A345ULV0_9BACT (Por secretion system C-terminal sorting domain-containing protein n=1 Tax=Candidatus Cyclonatronum proteinivorum TaxID=1457365 RepID=A0A345ULV0_9BACT)

HSP 1 Score: 110 bits (274), Expect = 1.580e-27
Identity = 49/84 (58.33%), Postives = 69/84 (82.14%), Query Frame = 1
Query:   58 ALSQNYPNPFNPTTKIEFSIEQSGHVKLEVFSTTGQKVAELINGLTTAGSHSVGFDASLLSSGIYIYRIVTQHGILSRKMILVK 309
            AL QNYPNPFNPTT I++++ +SGH++L+VF+  GQ+VA LING  TAG HS+ FD S LSSG+Y+YR+ T + +++RKM+L+K
Sbjct:  174 ALDQNYPNPFNPTTTIQYALPESGHIRLDVFNVLGQRVATLINGEQTAGFHSLQFDGSRLSSGVYLYRLQTSNQVITRKMLLLK 257          
BLAST of mRNA_M-pyrifera_M_contig126842.5398.1 vs. uniprot
Match: A0A6L3ZST7_9BACT (T9SS type A sorting domain-containing protein (Fragment) n=1 Tax=Ignavibacterium sp. TaxID=2651167 RepID=A0A6L3ZST7_9BACT)

HSP 1 Score: 99.8 bits (247), Expect = 4.400e-25
Identity = 49/85 (57.65%), Postives = 61/85 (71.76%), Query Frame = 1
Query:   55 FALSQNYPNPFNPTTKIEFSIEQSGHVKLEVFSTTGQKVAELINGLTTAGSHSVGFDASLLSSGIYIYRIVTQHGILSRKMILVK 309
            F LSQNYPNPFNPTTKI +++     V + V+S TG+ VAEL+N   TAGSHSV FDAS LSSG+YIY++       S KM+L+K
Sbjct:   26 FELSQNYPNPFNPTTKINYAVPFDSKVTISVYSITGELVAELVNNFVTAGSHSVNFDASNLSSGMYIYKMTAGSFTQSNKMLLLK 110          
BLAST of mRNA_M-pyrifera_M_contig126842.5398.1 vs. uniprot
Match: A0A345UJU1_9BACT (Por secretion system C-terminal sorting domain-containing protein n=1 Tax=Candidatus Cyclonatronum proteinivorum TaxID=1457365 RepID=A0A345UJU1_9BACT)

HSP 1 Score: 107 bits (266), Expect = 7.280e-25
Identity = 53/90 (58.89%), Postives = 66/90 (73.33%), Query Frame = 1
Query:   40 EKVRKFALSQNYPNPFNPTTKIEFSIEQSGHVKLEVFSTTGQKVAELINGLTTAGSHSVGFDASLLSSGIYIYRIVTQHGILSRKMILVK 309
            E VR F LSQNYPNPFNPTT IEF++ ++  V LEVFS  GQ+VA L+NG   AG HSV FDA+ LSSGIY+YR+     ++ R+M L+K
Sbjct:  487 ELVRDFHLSQNYPNPFNPTTMIEFAVPEATEVTLEVFSINGQRVATLLNGSVQAGQHSVSFDATNLSSGIYLYRLQAGSEVMMRQMTLIK 576          
BLAST of mRNA_M-pyrifera_M_contig126842.5398.1 vs. uniprot
Match: A0A345UPD8_9BACT (Por secretion system C-terminal sorting domain-containing protein n=1 Tax=Candidatus Cyclonatronum proteinivorum TaxID=1457365 RepID=A0A345UPD8_9BACT)

HSP 1 Score: 107 bits (266), Expect = 8.770e-25
Identity = 55/103 (53.40%), Postives = 76/103 (73.79%), Query Frame = 1
Query:    1 VYTQNTNTPPQKQEKVRKFALSQNYPNPFNPTTKIEFSIEQSGHVKLEVFSTTGQKVAELINGLTTAGSHSVGFDASLLSSGIYIYRIVTQHGILSRKMILVK 309
            + TQ T+T P+    +  F L QNYPNPFNPTT+I F++ ++  V+LEVF+  GQ+V +L+NG  +AG+H+V FDAS LSSG+YIYRIV    + +RKM+LVK
Sbjct: 1583 IVTQPTSTEPETDLPLA-FGLRQNYPNPFNPTTQITFALPEAADVRLEVFNLLGQRVEQLVNGRISAGTHTVTFDASRLSSGVYIYRIVAGEMVQTRKMMLVK 1684          
BLAST of mRNA_M-pyrifera_M_contig126842.5398.1 vs. uniprot
Match: A0A6H9LPK5_9BACT (T9SS C-terminal target domain-containing protein n=1 Tax=Calditrichaeota bacterium TaxID=2212469 RepID=A0A6H9LPK5_9BACT)

HSP 1 Score: 103 bits (257), Expect = 8.870e-25
Identity = 52/85 (61.18%), Postives = 64/85 (75.29%), Query Frame = 1
Query:   55 FALSQNYPNPFNPTTKIEFSIEQSGHVKLEVFSTTGQKVAELINGLTTAGSHSVGFDASLLSSGIYIYRIVTQHGILSRKMILVK 309
            F+L+QNYPNPFNPTT IEFS+  S  V LEVF+  GQKV EL NG  +AGSH V FDAS  SSG++ YR+ +  GI ++KM+LVK
Sbjct:  199 FSLAQNYPNPFNPTTSIEFSLPASSSVTLEVFNVLGQKVDELANGHFSAGSHIVEFDASEHSSGVFFYRLSSDQGIQTKKMLLVK 283          
BLAST of mRNA_M-pyrifera_M_contig126842.5398.1 vs. uniprot
Match: A0A5Q4FJA9_9BACT (T9SS C-terminal target domain-containing protein n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A5Q4FJA9_9BACT)

HSP 1 Score: 106 bits (265), Expect = 1.110e-24
Identity = 49/85 (57.65%), Postives = 67/85 (78.82%), Query Frame = 1
Query:   55 FALSQNYPNPFNPTTKIEFSIEQSGHVKLEVFSTTGQKVAELINGLTTAGSHSVGFDASLLSSGIYIYRIVTQHGILSRKMILVK 309
            F L+QNYPNPFNPTT+IEFS+ ++GHV L+V+   GQ+VA L+N   TAG+H+V FDAS L+SGIY+YR+     +L++KM L+K
Sbjct:  563 FVLTQNYPNPFNPTTQIEFSLPETGHVILDVYDMIGQRVATLVNENVTAGNHTVSFDASTLASGIYVYRLQAGSMVLTKKMTLIK 647          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126842.5398.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A356X2D4_9BACT1.910e-3371.76Por_Secre_tail domain-containing protein (Fragment... [more]
A0A2D9FQ52_9BACT4.000e-2968.24Por_Secre_tail domain-containing protein n=1 Tax=B... [more]
A0A521F1V8_9BACT7.720e-2957.28Por secretion system C-terminal sorting domain-con... [more]
A0A6A8Q3R8_9BACT1.080e-2856.31T9SS type A sorting domain-containing protein n=1 ... [more]
A0A345ULV0_9BACT1.580e-2758.33Por secretion system C-terminal sorting domain-con... [more]
A0A6L3ZST7_9BACT4.400e-2557.65T9SS type A sorting domain-containing protein (Fra... [more]
A0A345UJU1_9BACT7.280e-2558.89Por secretion system C-terminal sorting domain-con... [more]
A0A345UPD8_9BACT8.770e-2553.40Por secretion system C-terminal sorting domain-con... [more]
A0A6H9LPK5_9BACT8.870e-2561.18T9SS C-terminal target domain-containing protein n... [more]
A0A5Q4FJA9_9BACT1.110e-2457.65T9SS C-terminal target domain-containing protein n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig126842contigM-pyrifera_M_contig126842:193..504 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score102.1
Seed ortholog evalue1.7e-19
Seed eggNOG ortholog1121930.AQXG01000001_gene1316
Hectar predicted targeting categoryother localisation
EggNOG free text desc.A domain in the BMP inhibitor chordin and in microbial proteins.
EggNOG OGs1IVE6@117747,4NKF1@976,COG1520@1,COG1520@2,COG2931@1,COG2931@2
COG Functional cat.Q
Best tax levelSphingobacteriia
Best eggNOG OGNA|NA|NA
Exons1
Model size312
Cds size312
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815782.1035273-CDS-M-pyrifera_M_contig126842:192..5041622815782.1035273-CDS-M-pyrifera_M_contig126842:192..504Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig126842 193..504 -
1692277566.780957-CDS-M-pyrifera_M_contig126842:192..5041692277566.780957-CDS-M-pyrifera_M_contig126842:192..504Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig126842 193..504 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig126842.5398.1prot_M-pyrifera_M_contig126842.5398.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig126842 193..504 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig126842.5398.1

>prot_M-pyrifera_M_contig126842.5398.1 ID=prot_M-pyrifera_M_contig126842.5398.1|Name=mRNA_M-pyrifera_M_contig126842.5398.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=104bp
VYTQNTNTPPQKQEKVRKFALSQNYPNPFNPTTKIEFSIEQSGHVKLEVF
STTGQKVAELINGLTTAGSHSVGFDASLLSSGIYIYRIVTQHGILSRKMI
LVK*
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mRNA from alignment at M-pyrifera_M_contig126842:193..504-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig126842.5398.1 ID=mRNA_M-pyrifera_M_contig126842.5398.1|Name=mRNA_M-pyrifera_M_contig126842.5398.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=312bp|location=Sequence derived from alignment at M-pyrifera_M_contig126842:193..504- (Macrocystis pyrifera P11B4 male)
GTCTATACACAAAATACAAACACCCCCCCACAAAAACAAGAAAAAGTAAG AAAATTTGCTTTGTCCCAGAACTATCCCAATCCTTTTAATCCAACAACCA AAATTGAATTTTCAATTGAACAATCTGGTCACGTAAAACTTGAAGTATTT AGTACAACCGGACAAAAGGTAGCTGAACTAATAAATGGACTAACAACAGC TGGGTCACATTCTGTAGGTTTTGATGCATCACTCTTATCGTCAGGAATTT ATATTTACCGGATAGTAACACAGCATGGTATACTCTCCAGAAAAATGATT CTTGTTAAATAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig126842:193..504-

>mRNA_M-pyrifera_M_contig126842.5398.1 ID=mRNA_M-pyrifera_M_contig126842.5398.1|Name=mRNA_M-pyrifera_M_contig126842.5398.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=624bp|location=Sequence derived from alignment at M-pyrifera_M_contig126842:193..504- (Macrocystis pyrifera P11B4 male)
GTCTATACACAAAATACAAACACCCCCCCACAAAAACAAGAAAAAGTAAG
AAAATTTGCTTTGTCCCAGAACTATCCCAATCCTTTTAATCCAACAACCA
AAATTGAATTTTCAATTGAACAATCTGGTCACGTAAAACTTGAAGTATTT
AGTACAACCGGACAAAAGGTAGCTGAACTAATAAATGGACTAACAACAGC
TGGGTCACATTCTGTAGGTTTTGATGCATCACTCTTATCGTCAGGAATTT
ATATTTACCGGATAGTAACACAGCATGGTATACTCTCCAGAAAAATGATT
CTTGTTAAATAAGTCTATACACAAAATACAAACACCCCCCCACAAAAACA
AGAAAAAGTAAGAAAATTTGCTTTGTCCCAGAACTATCCCAATCCTTTTA
ATCCAACAACCAAAATTGAATTTTCAATTGAACAATCTGGTCACGTAAAA
CTTGAAGTATTTAGTACAACCGGACAAAAGGTAGCTGAACTAATAAATGG
ACTAACAACAGCTGGGTCACATTCTGTAGGTTTTGATGCATCACTCTTAT
CGTCAGGAATTTATATTTACCGGATAGTAACACAGCATGGTATACTCTCC
AGAAAAATGATTCTTGTTAAATAA
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