mRNA_M-pyrifera_M_contig126817.5394.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig126817.5394.1 vs. uniprot
Match: A0A2E7KA11_9PLAN (Uncharacterized protein n=6 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KA11_9PLAN) HSP 1 Score: 61.2 bits (147), Expect = 1.550e-9 Identity = 28/55 (50.91%), Postives = 38/55 (69.09%), Query Frame = 1
Query: 4 ELQHTKALNAEKMRSLETMKNLGVDLTKYLTAQTPQPDKFIRIEGSEGHALHLHE 168
EL+H +A N E+ R L TM+ + +DLT+YL AQ PD+ IRI G + +LHLHE
Sbjct: 345 ELEHQQAQNQEQSRYLGTMREMQIDLTRYLVAQYQNPDRLIRISGDKDPSLHLHE 399
BLAST of mRNA_M-pyrifera_M_contig126817.5394.1 vs. uniprot
Match: A0A517RIA1_9PLAN (Uncharacterized protein n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RIA1_9PLAN) HSP 1 Score: 59.7 bits (143), Expect = 5.430e-9 Identity = 28/55 (50.91%), Postives = 36/55 (65.45%), Query Frame = 1
Query: 4 ELQHTKALNAEKMRSLETMKNLGVDLTKYLTAQTPQPDKFIRIEGSEGHALHLHE 168
EL+H +A N E+ R L TM+ + VDLT+YL AQ PD+ IRI G LHLH+
Sbjct: 345 ELEHQRATNEEQSRYLATMREMQVDLTRYLVAQYQNPDRLIRITGDNEPKLHLHD 399
BLAST of mRNA_M-pyrifera_M_contig126817.5394.1 vs. uniprot
Match: A0A517MWH6_9BACT (Uncharacterized protein n=1 Tax=Adhaeretor mobilis TaxID=1930276 RepID=A0A517MWH6_9BACT) HSP 1 Score: 59.7 bits (143), Expect = 5.500e-9 Identity = 25/56 (44.64%), Postives = 39/56 (69.64%), Query Frame = 1
Query: 1 AELQHTKALNAEKMRSLETMKNLGVDLTKYLTAQTPQPDKFIRIEGSEGHALHLHE 168
A+++H + N E++R L ++ L VDLT+YL AQ PD+ IR++G+ G LHLH+
Sbjct: 434 ADVEHLRGENEERLRFLREIQGLQVDLTRYLVAQYQHPDRLIRVDGTNGSQLHLHD 489
BLAST of mRNA_M-pyrifera_M_contig126817.5394.1 vs. uniprot
Match: A0A517XEC8_9PLAN (Uncharacterized protein n=1 Tax=Gimesia maris TaxID=122 RepID=A0A517XEC8_9PLAN) HSP 1 Score: 57.8 bits (138), Expect = 8.160e-9 Identity = 27/55 (49.09%), Postives = 35/55 (63.64%), Query Frame = 1
Query: 4 ELQHTKALNAEKMRSLETMKNLGVDLTKYLTAQTPQPDKFIRIEGSEGHALHLHE 168
EL+H +A N E+ R L M+ + +DLT+YL AQ PD+ IRI G LHLHE
Sbjct: 121 ELEHQRAKNEEQGRYLAAMREMQIDLTRYLVAQYQNPDRLIRISGDHDANLHLHE 175
BLAST of mRNA_M-pyrifera_M_contig126817.5394.1 vs. uniprot
Match: A0A517Q9R4_9PLAN (Uncharacterized protein n=5 Tax=Gimesia TaxID=1649453 RepID=A0A517Q9R4_9PLAN) HSP 1 Score: 57.8 bits (138), Expect = 2.600e-8 Identity = 26/55 (47.27%), Postives = 36/55 (65.45%), Query Frame = 1
Query: 4 ELQHTKALNAEKMRSLETMKNLGVDLTKYLTAQTPQPDKFIRIEGSEGHALHLHE 168
EL+H ++ N E+ R L M+ + +DLT+YL AQ PD+ IRI G +LHLHE
Sbjct: 345 ELEHQRSKNEEQGRYLAAMREMQIDLTRYLVAQYQNPDRLIRISGDNDASLHLHE 399
BLAST of mRNA_M-pyrifera_M_contig126817.5394.1 vs. uniprot
Match: A0A7S3GGK3_9EUKA (Hypothetical protein n=4 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GGK3_9EUKA) HSP 1 Score: 51.6 bits (122), Expect = 3.920e-6 Identity = 27/58 (46.55%), Postives = 36/58 (62.07%), Query Frame = 1
Query: 4 ELQHTKALNAEKMRSLETMKNLGVDLTKYLTAQTPQPDKFIRIEGSEGHA---LHLHE 168
EL+ LN E+ R MK +GVDLT+YL +Q PDK I+++G+ G LHLHE
Sbjct: 350 ELKAKHDLNEEQARYYGRMKEMGVDLTRYLVSQYQHPDKVIKVDGNAGGKTPQLHLHE 407
BLAST of mRNA_M-pyrifera_M_contig126817.5394.1 vs. uniprot
Match: A0A2T6D0Y9_9BACT (Uncharacterized protein n=1 Tax=Spartobacteria bacterium LR76 TaxID=2161866 RepID=A0A2T6D0Y9_9BACT) HSP 1 Score: 50.4 bits (119), Expect = 1.000e-5 Identity = 26/55 (47.27%), Postives = 34/55 (61.82%), Query Frame = 1
Query: 7 LQHTKALNAEKMRSLETMKNLGVDLTKYLTAQTPQPDKFIRIE-GSEGHALHLHE 168
L H +A++ E+ + M+ L VDLT+YL AQ PDK IRI+ G LHLHE
Sbjct: 357 LNHERAMHEEQAQFFSRMRELQVDLTRYLVAQYQNPDKVIRIDQGQATPQLHLHE 411
BLAST of mRNA_M-pyrifera_M_contig126817.5394.1 vs. uniprot
Match: UPI0019C40B08 (Uncharacterized protein n=1 Tax=Candidatus Sericytochromatia bacterium TaxID=2762020 RepID=UPI0019C40B08) HSP 1 Score: 47.8 bits (112), Expect = 9.010e-5 Identity = 24/53 (45.28%), Postives = 31/53 (58.49%), Query Frame = 1
Query: 7 LQHTKALNAEKMRSLETMKNLGVDLTKYLTAQTPQPDKFIRIEGSEGHALHLH 165
++H N E+ L+T+K L VDLTKYL AQ DK I+I+ LHLH
Sbjct: 348 IEHKLLTNKEQETFLKTIKELDVDLTKYLVAQYYTADKLIKIDSDSKPQLHLH 400 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126817.5394.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig126817.5394.1 >prot_M-pyrifera_M_contig126817.5394.1 ID=prot_M-pyrifera_M_contig126817.5394.1|Name=mRNA_M-pyrifera_M_contig126817.5394.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=57bp AELQHTKALNAEKMRSLETMKNLGVDLTKYLTAQTPQPDKFIRIEGSEGHback to top mRNA from alignment at M-pyrifera_M_contig126817:292..462- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig126817.5394.1 ID=mRNA_M-pyrifera_M_contig126817.5394.1|Name=mRNA_M-pyrifera_M_contig126817.5394.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=171bp|location=Sequence derived from alignment at M-pyrifera_M_contig126817:292..462- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig126817:292..462- >mRNA_M-pyrifera_M_contig126817.5394.1 ID=mRNA_M-pyrifera_M_contig126817.5394.1|Name=mRNA_M-pyrifera_M_contig126817.5394.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=342bp|location=Sequence derived from alignment at M-pyrifera_M_contig126817:292..462- (Macrocystis pyrifera P11B4 male)back to top |