mRNA_M-pyrifera_M_contig126750.5386.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig126750.5386.1 vs. uniprot
Match: A0A3C0HNT6_9ACTN (Uncharacterized protein n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C0HNT6_9ACTN) HSP 1 Score: 218 bits (555), Expect = 2.200e-65 Identity = 112/162 (69.14%), Postives = 132/162 (81.48%), Query Frame = 1
Query: 16 LLGALPGAECCAADSAERLFTAVRDESTEVIVLFPIEDEDVEGLAWAEELGIKELVGEFTTNYTADQTRNINIARIAELTRGAVIEPGETFSVNDYVGRRTVENGFVAAGVISNGVFDSSVGGGISQYATTLFNAAFFAGLDFGEYQSHSIYISRSPYVREA 501
++G+ PGA CC D+ ER+ + + ++ L P ED DV+G+ WA+ LGI E++GEFTTN+ +QTRNINI RIAELT+GAVIEPG FS+NDYVGRRT ENGFV AGVISNGVF +SVGGGISQYATTLFNAAFFAGLDFG+YQSHSIYISR PY REA
Sbjct: 286 IVGSSPGAVCCTLDTPERILAGM-EAGERLVELRPREDPDVQGIEWAKSLGIVEVIGEFTTNFQPNQTRNINIQRIAELTQGAVIEPGGEFSINDYVGRRTRENGFVDAGVISNGVFTTSVGGGISQYATTLFNAAFFAGLDFGDYQSHSIYISRYPYGREA 446
BLAST of mRNA_M-pyrifera_M_contig126750.5386.1 vs. uniprot
Match: A0A358A309_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A358A309_9ACTN) HSP 1 Score: 214 bits (546), Expect = 1.010e-64 Identity = 111/162 (68.52%), Postives = 132/162 (81.48%), Query Frame = 1
Query: 16 LLGALPGAECCAADSAERLFTAVRDESTEVIVLFPIEDEDVEGLAWAEELGIKELVGEFTTNYTADQTRNINIARIAELTRGAVIEPGETFSVNDYVGRRTVENGFVAAGVISNGVFDSSVGGGISQYATTLFNAAFFAGLDFGEYQSHSIYISRSPYVREA 501
+LG+ PGA CC D+ +R+ A+ + +V+ L P ED +V G+AWAE LGI E++GEFTT Y +QTRNINI RIAELT+GAVIEPG FS+NDYVGRRT E GFV AGVIS+GVF +SVGGGISQYATTLFNAAFFAGLDFG+YQSHSIY+SR P+ REA
Sbjct: 286 ILGSSPGAVCCTLDTPQRILAAM-EAGEQVVKLRPREDPEVRGIAWAESLGIVEVIGEFTTYYQPNQTRNINIQRIAELTQGAVIEPGGEFSINDYVGRRTREKGFVDAGVISHGVFTTSVGGGISQYATTLFNAAFFAGLDFGDYQSHSIYLSRYPFGREA 446
BLAST of mRNA_M-pyrifera_M_contig126750.5386.1 vs. uniprot
Match: A0A7Y2GKF7_9ACTN (PG_binding_4 domain-containing protein (Fragment) n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GKF7_9ACTN) HSP 1 Score: 199 bits (505), Expect = 6.130e-58 Identity = 105/162 (64.81%), Postives = 122/162 (75.31%), Query Frame = 1
Query: 16 LLGALPGAECCAADSAERLFTAVRDESTEVIVLFPIEDEDVEGLAWAEELGIKELVGEFTTNYTADQTRNINIARIAELTRGAVIEPGETFSVNDYVGRRTVENGFVAAGVISNGVFDSSVGGGISQYATTLFNAAFFAGLDFGEYQSHSIYISRSPYVREA 501
++G PG CC D+ ERL A+ + + + PIE + G WAE + I ELVGEFTT YTA Q+R +NIARI++LTRG VIEPGE FSVND+VGRRT ENGFV AGVI NG++ VGGGISQYATTLFNAAFFAGLDFGEYQSHS+ ISR PY REA
Sbjct: 293 IVGGRPGLACCTPDAPERLLRAII-LGDDTVAVEPIEIGEDAGRQWAESMQITELVGEFTTFYTAGQSRTVNIARISDLTRGVVIEPGEMFSVNDFVGRRTTENGFVGAGVIYNGIYTEDVGGGISQYATTLFNAAFFAGLDFGEYQSHSLPISRYPYGREA 453
BLAST of mRNA_M-pyrifera_M_contig126750.5386.1 vs. uniprot
Match: A0A7K1Z7Z8_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z7Z8_9ACTN) HSP 1 Score: 199 bits (505), Expect = 1.340e-57 Identity = 105/164 (64.02%), Postives = 123/164 (75.00%), Query Frame = 1
Query: 10 LYLLGALPGAECCAADSAERLFTAVRDESTEVIVLFPIEDEDVEGLAWAEELGIKELVGEFTTNYTADQTRNINIARIAELTRGAVIEPGETFSVNDYVGRRTVENGFVAAGVISNGVFDSSVGGGISQYATTLFNAAFFAGLDFGEYQSHSIYISRSPYVREA 501
++++G PG+ CC D+ ER+ A+ V V P ED D +G+AWAE LGI+E+VG+FTTN+ Q R INI RIAELT+GAVIEPG TFSVN Y+G RTVE GFV AG I GVF S+GGGISQYATTLFNAAFFAGLDFG YQSHSIY+ R PY REA
Sbjct: 279 IHIVGGSPGSVCCTEDTGERILDALIAGEGRVKVR-PTEDPDAKGVAWAESLGIREVVGQFTTNFAPGQPRVINIFRIAELTQGAVIEPGGTFSVNGYIGPRTVEEGFVPAGTIYEGVFVDSIGGGISQYATTLFNAAFFAGLDFGVYQSHSIYLDRYPYGREA 441
BLAST of mRNA_M-pyrifera_M_contig126750.5386.1 vs. uniprot
Match: A0A3M2HDU3_ACTSX (Uncharacterized protein (Fragment) n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2HDU3_ACTSX) HSP 1 Score: 192 bits (489), Expect = 1.040e-55 Identity = 107/167 (64.07%), Postives = 124/167 (74.25%), Query Frame = 1
Query: 7 ELYLLGALPGAECCAADSAERLFTAV--RDESTEVIVLFPIEDEDVEGLAWAEELGIKELVGEFTTNYTADQTRNINIARIAELTRGAVIEPGETFSVNDYVGRRTVENGFVAAGVISNGVFDSSVGGGISQYATTLFNAAFFAGLDFGEYQSHSIYISRSPYVREA 501
E+ ++G P CCAAD+A+ ++ + D+ EV + E G WAE LGI+ELVG FTT++ Q+R NI RI+ELTRG VIEPGETFSVN++VGRRT GFVAAGVI NGVF S VGGGISQYATTLFNAAFFAGLDFGEYQSHSIYISR PY REA
Sbjct: 302 EVRIVGGEPDRSCCAADAADAVWAGLVAGDDPVEVPLA---ETPHPRGREWAESLGIRELVGGFTTHFKPGQSRVKNIERISELTRGVVIEPGETFSVNEFVGRRTTAKGFVAAGVIYNGVFRSDVGGGISQYATTLFNAAFFAGLDFGEYQSHSIYISRYPYGREA 465
BLAST of mRNA_M-pyrifera_M_contig126750.5386.1 vs. uniprot
Match: A0A6J7AQ57_9ZZZZ (Unannotated protein n=2 Tax=root TaxID=1 RepID=A0A6J7AQ57_9ZZZZ) HSP 1 Score: 192 bits (489), Expect = 1.200e-55 Identity = 101/167 (60.48%), Postives = 124/167 (74.25%), Query Frame = 1
Query: 1 DAELYLLGALPGAECCAADSAERLFTAVRDESTEVIVLFPIEDEDVEGLAWAEELGIKELVGEFTTNYTADQTRNINIARIAELTRGAVIEPGETFSVNDYVGRRTVENGFVAAGVISNGVFDSSVGGGISQYATTLFNAAFFAGLDFGEYQSHSIYISRSPYVREA 501
D ++ +L P +CC AD+A R+ TA+ S+ V F E +G WA LG+KELVGEFTT Y A Q R +NI RIAELT+GA+IEPG+TFS+N +VG+RT+ENGFV+ GVI +GVF VGGGISQYATTLFNAAFF GLD+ +YQSHSIYI+R PY REA
Sbjct: 283 DGKVLILEGEPATKCCNADTATRVNTALHARSSSTDVAFT-ETPRPKGREWAATLGVKELVGEFTTRYPAGQPRVVNIKRIAELTQGALIEPGKTFSINGFVGKRTIENGFVSGGVIQDGVFQEDVGGGISQYATTLFNAAFFGGLDYAKYQSHSIYITRYPYGREA 448
BLAST of mRNA_M-pyrifera_M_contig126750.5386.1 vs. uniprot
Match: A0A6G0A2D5_9ACTN (PG_binding_4 domain-containing protein n=2 Tax=Bacteria TaxID=2 RepID=A0A6G0A2D5_9ACTN) HSP 1 Score: 188 bits (478), Expect = 3.440e-54 Identity = 103/167 (61.68%), Postives = 120/167 (71.86%), Query Frame = 1
Query: 1 DAELYLLGALPGAECCAADSAERLFTAVRDESTEVIVLFPIEDEDVEGLAWAEELGIKELVGEFTTNYTADQTRNINIARIAELTRGAVIEPGETFSVNDYVGRRTVENGFVAAGVISNGVFDSSVGGGISQYATTLFNAAFFAGLDFGEYQSHSIYISRSPYVREA 501
D +Y GA G CC DS++R+ TA+ T + + + E AWAE LGIKE VGEFTTNY A ++R NI RIA++TRG VIEPGET+SVNDYVG RTVE GFV G I NG F + +GGG+SQYATTLFNAAFFAGLD+GEY SHSIYISR PY REA
Sbjct: 292 DQVVYQPGA-DGVVCCTEDSSQRVLTALEAGETTIQLQTKVVAA-AENAAWAESLGIKEKVGEFTTNYAAGESRVTNIHRIADITRGVVIEPGETWSVNDYVGPRTVEGGFVEGGAIYNGEFTTDIGGGVSQYATTLFNAAFFAGLDYGEYMSHSIYISRYPYGREA 456
BLAST of mRNA_M-pyrifera_M_contig126750.5386.1 vs. uniprot
Match: A0A6N9EUG7_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9EUG7_9ACTN) HSP 1 Score: 174 bits (440), Expect = 4.340e-48 Identity = 97/158 (61.39%), Postives = 112/158 (70.89%), Query Frame = 1
Query: 28 LPGAECCAADSAERLFTAVRDESTEVIVLFPIEDEDVEGLAWAEELGIKELVGEFTTNYTADQTRNINIARIAELTRGAVIEPGETFSVNDYVGRRTVENGFVAAGVISNGVFDSSVGGGISQYATTLFNAAFFAGLDFGEYQSHSIYISRSPYVREA 501
+PG CC +AE L + E + ++L G WAE +GI LV EFTT +T Q R INIARI+ELTRG VIEPG+ FSVN+YVG RTV NGFV A +I +GVF SVGGGISQYATTLFNAAFFAGLDF +YQSHSIY+SR PY REA
Sbjct: 304 VPGFRCCHETAAEVLLAGLM-EDRDPVMLPAAPAPHPRGREWAESMGITHLVAEFTTPFTPGQDRIINIARISELTRGVVIEPGQRFSVNEYVGPRTVANGFVPAAMILDGVFVDSVGGGISQYATTLFNAAFFAGLDFIDYQSHSIYLSRYPYGREA 460
BLAST of mRNA_M-pyrifera_M_contig126750.5386.1 vs. uniprot
Match: UPI001F1B8200 (VanW family protein n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001F1B8200) HSP 1 Score: 171 bits (432), Expect = 1.070e-47 Identity = 92/157 (58.60%), Postives = 113/157 (71.97%), Query Frame = 1
Query: 31 PGAECCAADSAERLFTAVRDESTEVIVLFPIEDEDVEGLAWAEELGIKELVGEFTTNYTADQTRNINIARIAELTRGAVIEPGETFSVNDYVGRRTVENGFVAAGVISNGVFDSSVGGGISQYATTLFNAAFFAGLDFGEYQSHSIYISRSPYVREA 501
PG CCAADS +R+ A+R EV + E + + AWA +GI +VG FTTN+ A ++R NI RIA+L RG VIEPGETFSVN+YVG+RT GFV AGVI G F + +GGG+SQ+ATT+FNAAFFAGLD EYQ+H+IYISR PY REA
Sbjct: 266 PGTGCCAADSPQRVVDALRSGRGEVDLDLATEQPEHDA-AWARRMGITTVVGTFTTNHAAGESRVTNIHRIADLIRGVVIEPGETFSVNEYVGQRTRAKGFVEAGVIYAGKFTTDIGGGVSQFATTMFNAAFFAGLDLVEYQAHTIYISRYPYGREA 421
BLAST of mRNA_M-pyrifera_M_contig126750.5386.1 vs. uniprot
Match: A0A7Y1UZZ1_9ACTN (PG_binding_4 domain-containing protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y1UZZ1_9ACTN) HSP 1 Score: 172 bits (435), Expect = 1.150e-47 Identity = 95/167 (56.89%), Postives = 115/167 (68.86%), Query Frame = 1
Query: 1 DAELYLLGALPGAECCAADSAERLFTAVRDESTEVIVLFPIEDEDVEGLAWAEELGIKELVGEFTTNYTADQTRNINIARIAELTRGAVIEPGETFSVNDYVGRRTVENGFVAAGVISNGVFDSSVGGGISQYATTLFNAAFFAGLDFGEYQSHSIYISRSPYVREA 501
+ EL++ +P +CCA A LF A +T+ + L + ED G + AEE GI ELV FTTN++ Q R NI RIA+L RG ++EPGET S+ND++GRRT NGFVA GVI +G F VGGGISQ+ATT FNAAFFAGLD EYQSHSIYISR PY REA
Sbjct: 292 EGELHVDLGVPARQCCAPGVAPLLFEAAVTGTTKAVELPTVRVEDDGGQSRAEEFGINELVSTFTTNHSCCQNRVTNIHRIADLVRGQILEPGETLSINDFIGRRTRANGFVADGVIQSGHFIDEVGGGISQFATTTFNAAFFAGLDIPEYQSHSIYISRYPYGREA 458 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126750.5386.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig126750.5386.1 >prot_M-pyrifera_M_contig126750.5386.1 ID=prot_M-pyrifera_M_contig126750.5386.1|Name=mRNA_M-pyrifera_M_contig126750.5386.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=167bp DAELYLLGALPGAECCAADSAERLFTAVRDESTEVIVLFPIEDEDVEGLAback to top mRNA from alignment at M-pyrifera_M_contig126750:9..509+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig126750.5386.1 ID=mRNA_M-pyrifera_M_contig126750.5386.1|Name=mRNA_M-pyrifera_M_contig126750.5386.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=501bp|location=Sequence derived from alignment at M-pyrifera_M_contig126750:9..509+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig126750:9..509+ >mRNA_M-pyrifera_M_contig126750.5386.1 ID=mRNA_M-pyrifera_M_contig126750.5386.1|Name=mRNA_M-pyrifera_M_contig126750.5386.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1002bp|location=Sequence derived from alignment at M-pyrifera_M_contig126750:9..509+ (Macrocystis pyrifera P11B4 male)back to top |