mRNA_M-pyrifera_M_contig126746.5384.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig126746.5384.1
Unique NamemRNA_M-pyrifera_M_contig126746.5384.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig126746.5384.1 vs. uniprot
Match: A0A0J7P235_LASNI (Enoyl-hydratase domain-containing protein mitochondrial-like protein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7P235_LASNI)

HSP 1 Score: 121 bits (303), Expect = 2.270e-31
Identity = 59/95 (62.11%), Postives = 75/95 (78.95%), Query Frame = 1 
Query:   10 RAIASHPLVVVGAVDGIAAAAGCQLVASTDFAFATESSHFSTPGISLGLFCSTPGVPLARCVPPQAAAHMLFTGKPISAQRAYEIGLIAKVVPSE 294
            RAI+  P+ V+ AVDG+AAAAGCQL+A+ D A  TE S FSTPG +LG+FCSTPG+PL R VP + A +MLFTG PIS + AYE GL++KVVP++
Sbjct:  111 RAISQSPVPVIAAVDGLAAAAGCQLIAACDIAVCTERSSFSTPGANLGIFCSTPGIPLVRNVPRKRAMYMLFTGLPISGREAYECGLVSKVVPND 205
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BLAST of mRNA_M-pyrifera_M_contig126746.5384.1 vs. uniprot
Match: UPI00076714A1 (enoyl-CoA hydratase domain-containing protein 3, mitochondrial n=1 Tax=Dufourea novaeangliae TaxID=178035 RepID=UPI00076714A1)

HSP 1 Score: 120 bits (301), Expect = 3.960e-31
Identity = 59/95 (62.11%), Postives = 75/95 (78.95%), Query Frame = 1 
Query:   10 RAIASHPLVVVGAVDGIAAAAGCQLVASTDFAFATESSHFSTPGISLGLFCSTPGVPLARCVPPQAAAHMLFTGKPISAQRAYEIGLIAKVVPSE 294
            R+IA  PL V+ AVDG+A+AAGCQLVA+ D A  TE S FSTPG +LG+FCSTPG+PL R VP + A +MLFTG  IS + AYE+GL++KVVP++
Sbjct:  105 RSIAQSPLPVIAAVDGLASAAGCQLVAACDIAICTERSSFSTPGANLGIFCSTPGIPLIRNVPKKTAMYMLFTGFTISGKEAYEVGLVSKVVPND 199
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BLAST of mRNA_M-pyrifera_M_contig126746.5384.1 vs. uniprot
Match: A0A7M7GED8_NASVI (Uncharacterized protein n=3 Tax=Pteromalinae TaxID=272242 RepID=A0A7M7GED8_NASVI)

HSP 1 Score: 120 bits (302), Expect = 5.410e-31
Identity = 60/98 (61.22%), Postives = 75/98 (76.53%), Query Frame = 1 
Query:    1 RVSRAIASHPLVVVGAVDGIAAAAGCQLVASTDFAFATESSHFSTPGISLGLFCSTPGVPLARCVPPQAAAHMLFTGKPISAQRAYEIGLIAKVVPSE 294
            ++ +AI   P+ V+ AVDG+AAAAGCQLVA+ D    TE S FSTPG + G+FCSTPG+PL R VP + AAHMLFTG PISAQ AY  GL++KVVP++
Sbjct:  132 QLMKAIDKSPVPVIAAVDGLAAAAGCQLVAACDIVVCTERSSFSTPGANFGIFCSTPGIPLIRNVPRKVAAHMLFTGLPISAQEAYLAGLVSKVVPTD 229
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BLAST of mRNA_M-pyrifera_M_contig126746.5384.1 vs. uniprot
Match: E2AFW5_CAMFO (Enoyl-CoA hydratase domain-containing protein 3, mitochondrial n=2 Tax=Camponotus floridanus TaxID=104421 RepID=E2AFW5_CAMFO)

HSP 1 Score: 119 bits (298), Expect = 8.870e-31
Identity = 58/95 (61.05%), Postives = 75/95 (78.95%), Query Frame = 1 
Query:   10 RAIASHPLVVVGAVDGIAAAAGCQLVASTDFAFATESSHFSTPGISLGLFCSTPGVPLARCVPPQAAAHMLFTGKPISAQRAYEIGLIAKVVPSE 294
            RAI+  P+ V+ AVDG+AAAAGCQLVA+ D A  TE S FSTPG ++G+FCSTPG+PL R +P + A +MLFTG PIS + AYE GL++KVVP++
Sbjct:   95 RAISQSPVPVIAAVDGLAAAAGCQLVAACDIAVCTERSSFSTPGANIGIFCSTPGIPLVRNMPRKNAMYMLFTGLPISGREAYEYGLVSKVVPND 189
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BLAST of mRNA_M-pyrifera_M_contig126746.5384.1 vs. uniprot
Match: UPI00143D091D (enoyl-CoA hydratase domain-containing protein 3, mitochondrial isoform X1 n=2 Tax=Belonocnema kinseyi TaxID=2817044 RepID=UPI00143D091D)

HSP 1 Score: 120 bits (300), Expect = 9.100e-31
Identity = 60/97 (61.86%), Postives = 75/97 (77.32%), Query Frame = 1 
Query:    4 VSRAIASHPLVVVGAVDGIAAAAGCQLVASTDFAFATESSHFSTPGISLGLFCSTPGVPLARCVPPQAAAHMLFTGKPISAQRAYEIGLIAKVVPSE 294
            V RAI   P+ V+ AVDG+AAAAGCQLVA+ D A  TE S FSTPG + G+FCSTPG+PL R V  + A+HMLFTG PI+A+ AYE GL++KVVP++
Sbjct:  124 VMRAIMQCPVPVIAAVDGLAAAAGCQLVAACDIAVCTEKSTFSTPGANFGIFCSTPGIPLVRNVSRKVASHMLFTGLPITAKEAYEAGLVSKVVPND 220
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BLAST of mRNA_M-pyrifera_M_contig126746.5384.1 vs. uniprot
Match: UPI0010FB217F (enoyl-CoA hydratase domain-containing protein 3, mitochondrial n=2 Tax=Formicinae TaxID=7479 RepID=UPI0010FB217F)

HSP 1 Score: 119 bits (299), Expect = 1.150e-30
Identity = 59/95 (62.11%), Postives = 73/95 (76.84%), Query Frame = 1 
Query:   10 RAIASHPLVVVGAVDGIAAAAGCQLVASTDFAFATESSHFSTPGISLGLFCSTPGVPLARCVPPQAAAHMLFTGKPISAQRAYEIGLIAKVVPSE 294
            RAI+  P+ V+ AVDG+AAAAGCQLV + D A  TE S FSTPG +LG+FCSTPG+PL R VP + A +MLFTG PIS + AYE GL++KVVP +
Sbjct:  123 RAISQSPVPVIAAVDGLAAAAGCQLVVACDIAVCTERSSFSTPGANLGIFCSTPGIPLVRNVPRKRAMYMLFTGLPISGREAYECGLVSKVVPDD 217
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BLAST of mRNA_M-pyrifera_M_contig126746.5384.1 vs. uniprot
Match: UPI0005CEEED7 (enoyl-CoA hydratase domain-containing protein 3, mitochondrial isoform X1 n=3 Tax=Ceratosolen solmsi marchali TaxID=326594 RepID=UPI0005CEEED7)

HSP 1 Score: 119 bits (299), Expect = 1.230e-30
Identity = 57/96 (59.38%), Postives = 74/96 (77.08%), Query Frame = 1 
Query:    1 RVSRAIASHPLVVVGAVDGIAAAAGCQLVASTDFAFATESSHFSTPGISLGLFCSTPGVPLARCVPPQAAAHMLFTGKPISAQRAYEIGLIAKVVP 288
            ++ +AI+  P+ V+ AVDG+A AAGCQLVA+ D    TE S FSTPG++ G+FCSTPG+PL R VP + AAHMLFTG PISA  AY+ GL++K+VP
Sbjct:  122 QLMKAISECPVPVIAAVDGLATAAGCQLVAACDIVVGTERSSFSTPGVNFGIFCSTPGIPLIRNVPKKVAAHMLFTGLPISAVEAYQAGLVSKIVP 217
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BLAST of mRNA_M-pyrifera_M_contig126746.5384.1 vs. uniprot
Match: A0A6J1Q653_9HYME (enoyl-CoA hydratase domain-containing protein 3, mitochondrial isoform X1 n=3 Tax=Myrmicinae TaxID=34695 RepID=A0A6J1Q653_9HYME)

HSP 1 Score: 119 bits (297), Expect = 2.020e-30
Identity = 58/95 (61.05%), Postives = 75/95 (78.95%), Query Frame = 1 
Query:   10 RAIASHPLVVVGAVDGIAAAAGCQLVASTDFAFATESSHFSTPGISLGLFCSTPGVPLARCVPPQAAAHMLFTGKPISAQRAYEIGLIAKVVPSE 294
            RAI+  P+ V+ AVDG+AAAAGCQL+A+ D A  TE S FSTPG +LG+FCSTPG+PL R VP ++A +MLFTG PIS + AYE GL++KVV ++
Sbjct:  117 RAISQSPVPVIAAVDGLAAAAGCQLIAACDIAVCTERSSFSTPGANLGIFCSTPGIPLVRNVPRKSAMYMLFTGLPISGREAYECGLVSKVVAND 211
[Close]
BLAST of mRNA_M-pyrifera_M_contig126746.5384.1 vs. uniprot
Match: UPI0013F1EAFF (enoyl-CoA hydratase domain-containing protein 3, mitochondrial isoform X1 n=2 Tax=Odontomachus brunneus TaxID=486640 RepID=UPI0013F1EAFF)

HSP 1 Score: 119 bits (297), Expect = 2.100e-30
Identity = 58/95 (61.05%), Postives = 76/95 (80.00%), Query Frame = 1 
Query:   10 RAIASHPLVVVGAVDGIAAAAGCQLVASTDFAFATESSHFSTPGISLGLFCSTPGVPLARCVPPQAAAHMLFTGKPISAQRAYEIGLIAKVVPSE 294
            R+I+  P+ V+ AVDG+AAAAGCQLVA+ D A  TE S FSTPG +LG+FCSTPG+PL R VP ++A++MLFTG PIS + AYE GL++KVV ++
Sbjct:  119 RSISQSPVPVIAAVDGLAAAAGCQLVAACDIAVCTERSSFSTPGANLGIFCSTPGIPLVRNVPRKSASYMLFTGYPISGKEAYECGLVSKVVQND 213
[Close]
BLAST of mRNA_M-pyrifera_M_contig126746.5384.1 vs. uniprot
Match: A0A154PJA1_DUFNO (Enoyl-CoA hydratase domain-containing protein 3, mitochondrial n=1 Tax=Dufourea novaeangliae TaxID=178035 RepID=A0A154PJA1_DUFNO)

HSP 1 Score: 120 bits (301), Expect = 2.870e-30
Identity = 59/95 (62.11%), Postives = 75/95 (78.95%), Query Frame = 1 
Query:   10 RAIASHPLVVVGAVDGIAAAAGCQLVASTDFAFATESSHFSTPGISLGLFCSTPGVPLARCVPPQAAAHMLFTGKPISAQRAYEIGLIAKVVPSE 294
            R+IA  PL V+ AVDG+A+AAGCQLVA+ D A  TE S FSTPG +LG+FCSTPG+PL R VP + A +MLFTG  IS + AYE+GL++KVVP++
Sbjct:  110 RSIAQSPLPVIAAVDGLASAAGCQLVAACDIAICTERSSFSTPGANLGIFCSTPGIPLIRNVPKKTAMYMLFTGFTISGKEAYEVGLVSKVVPND 204
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126746.5384.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0J7P235_LASNI2.270e-3162.11Enoyl-hydratase domain-containing protein mitochon... [more]
UPI00076714A13.960e-3162.11enoyl-CoA hydratase domain-containing protein 3, m... [more]
A0A7M7GED8_NASVI5.410e-3161.22Uncharacterized protein n=3 Tax=Pteromalinae TaxID... [more]
E2AFW5_CAMFO8.870e-3161.05Enoyl-CoA hydratase domain-containing protein 3, m... [more]
UPI00143D091D9.100e-3161.86enoyl-CoA hydratase domain-containing protein 3, m... [more]
UPI0010FB217F1.150e-3062.11enoyl-CoA hydratase domain-containing protein 3, m... [more]
UPI0005CEEED71.230e-3059.38enoyl-CoA hydratase domain-containing protein 3, m... [more]
A0A6J1Q653_9HYME2.020e-3061.05enoyl-CoA hydratase domain-containing protein 3, m... [more]
UPI0013F1EAFF2.100e-3061.05enoyl-CoA hydratase domain-containing protein 3, m... [more]
A0A154PJA1_DUFNO2.870e-3062.11Enoyl-CoA hydratase domain-containing protein 3, m... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig126746contigM-pyrifera_M_contig126746:1..354 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score122.1
Seed ortholog evalue1.7e-25
Seed eggNOG ortholog7425.NV12397-PA
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Enoyl-CoA hydratase/isomerase
EggNOG OGs39M8G@33154,3B9EW@33208,3CW99@33213,3SJJ1@50557,41YI2@6656,46FSY@7399,KOG1682@1,KOG1682@2759
COG Functional cat.I
Best tax levelHymenoptera
Best eggNOG OGNA|NA|NA
Exons1
Model size354
Cds size354
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815781.4705713-CDS-M-pyrifera_M_contig126746:0..3541622815781.4705713-CDS-M-pyrifera_M_contig126746:0..354Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig126746 1..354 +
1692277566.5222821-CDS-M-pyrifera_M_contig126746:0..3541692277566.5222821-CDS-M-pyrifera_M_contig126746:0..354Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig126746 1..354 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig126746.5384.1prot_M-pyrifera_M_contig126746.5384.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig126746 1..354 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig126746.5384.1

>prot_M-pyrifera_M_contig126746.5384.1 ID=prot_M-pyrifera_M_contig126746.5384.1|Name=mRNA_M-pyrifera_M_contig126746.5384.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=118bp
RVSRAIASHPLVVVGAVDGIAAAAGCQLVASTDFAFATESSHFSTPGISL
GLFCSTPGVPLARCVPPQAAAHMLFTGKPISAQRAYEIGLIAKVVPSEEK
KGVGEEGGRGGDGEKESS
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mRNA from alignment at M-pyrifera_M_contig126746:1..354+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig126746.5384.1 ID=mRNA_M-pyrifera_M_contig126746.5384.1|Name=mRNA_M-pyrifera_M_contig126746.5384.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=354bp|location=Sequence derived from alignment at M-pyrifera_M_contig126746:1..354+ (Macrocystis pyrifera P11B4 male)
AGGGTTTCTAGAGCGATCGCATCACACCCTCTGGTCGTTGTGGGTGCTGT
GGACGGGATCGCAGCAGCTGCAGGTTGCCAGCTGGTGGCATCGACGGATT
TTGCATTTGCCACGGAATCGTCCCATTTCTCAACGCCAGGCATTTCCCTA
GGCCTCTTCTGCTCCACCCCCGGCGTGCCCCTCGCCCGCTGCGTACCCCC
ACAGGCGGCAGCACATATGCTCTTCACTGGAAAGCCCATTTCGGCACAAC
GCGCCTACGAAATCGGGCTTATCGCAAAAGTGGTGCCTTCTGAGGAGAAG
AAGGGTGTGGGAGAGGAAGGTGGAAGGGGCGGAGACGGCGAAAAAGAAAG
TTCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig126746:1..354+

>mRNA_M-pyrifera_M_contig126746.5384.1 ID=mRNA_M-pyrifera_M_contig126746.5384.1|Name=mRNA_M-pyrifera_M_contig126746.5384.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=708bp|location=Sequence derived from alignment at M-pyrifera_M_contig126746:1..354+ (Macrocystis pyrifera P11B4 male)
AGGGTTTCTAGAGCGATCGCATCACACCCTCTGGTCGTTGTGGGTGCTGT
GGACGGGATCGCAGCAGCTGCAGGTTGCCAGCTGGTGGCATCGACGGATT
TTGCATTTGCCACGGAATCGTCCCATTTCTCAACGCCAGGCATTTCCCTA
GGCCTCTTCTGCTCCACCCCCGGCGTGCCCCTCGCCCGCTGCGTACCCCC
ACAGGCGGCAGCACATATGCTCTTCACTGGAAAGCCCATTTCGGCACAAC
GCGCCTACGAAATCGGGCTTATCGCAAAAGTGGTGCCTTCTGAGGAGAAG
AAGGGTGTGGGAGAGGAAGGTGGAAGGGGCGGAGACGGCGAAAAAGAAAG
TTCCAGGGTTTCTAGAGCGATCGCATCACACCCTCTGGTCGTTGTGGGTG
CTGTGGACGGGATCGCAGCAGCTGCAGGTTGCCAGCTGGTGGCATCGACG
GATTTTGCATTTGCCACGGAATCGTCCCATTTCTCAACGCCAGGCATTTC
CCTAGGCCTCTTCTGCTCCACCCCCGGCGTGCCCCTCGCCCGCTGCGTAC
CCCCACAGGCGGCAGCACATATGCTCTTCACTGGAAAGCCCATTTCGGCA
CAACGCGCCTACGAAATCGGGCTTATCGCAAAAGTGGTGCCTTCTGAGGA
GAAGAAGGGTGTGGGAGAGGAAGGTGGAAGGGGCGGAGACGGCGAAAAAG
AAAGTTCC
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