mRNA_M-pyrifera_M_contig126648.5364.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig126648.5364.1
Unique NamemRNA_M-pyrifera_M_contig126648.5364.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig126648.5364.1 vs. uniprot
Match: A0A7S2Y1U9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1U9_9STRA)

HSP 1 Score: 108 bits (270), Expect = 2.610e-26
Identity = 53/83 (63.86%), Postives = 61/83 (73.49%), Query Frame = 1
Query:    4 MKHMLSAHGFFVPDQEYLVDCSGMLEYLGEKVGLGNVCLYCNRL---FPSLAAVRAHMGAKAHCKLQYEEGVDLEEYEDFYDF 243
            + HM   HGFFVPDQEYLVD  G+LEYLG KV +G +CLYC R    F S AA R HM A+ HCKL+YEEG DL EY++FYDF
Sbjct:  198 LDHMARCHGFFVPDQEYLVDLEGLLEYLGAKVQVGRLCLYCGRDQAGFKSGAACRQHMIARGHCKLRYEEGWDLHEYQEFYDF 280          
BLAST of mRNA_M-pyrifera_M_contig126648.5364.1 vs. uniprot
Match: A0A4Y9ZZN4_9AGAM (C2H2-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZZN4_9AGAM)

HSP 1 Score: 105 bits (261), Expect = 2.760e-25
Identity = 48/84 (57.14%), Postives = 62/84 (73.81%), Query Frame = 1
Query:    1 NMKHMLSAHGFFVPDQEYLVDCSGMLEYLGEKVGLGNVCLYCN---RLFPSLAAVRAHMGAKAHCKLQYEEGVDLEEYEDFYDF 243
            N+ HM + H FFVPD EYLVD +G++ YLGEK+ +GNVC+YCN   R F +L AVR HMG K+HCK+ Y++  D+ E  DFYDF
Sbjct:  204 NLTHMSTEHSFFVPDAEYLVDITGLITYLGEKIAVGNVCIYCNGTGREFRTLDAVRKHMGDKSHCKIAYDKEADMLEVADFYDF 287          
BLAST of mRNA_M-pyrifera_M_contig126648.5364.1 vs. uniprot
Match: A0A4Y9ZN80_9AGAM (C2H2-type domain-containing protein (Fragment) n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZN80_9AGAM)

HSP 1 Score: 102 bits (254), Expect = 5.800e-25
Identity = 46/84 (54.76%), Postives = 61/84 (72.62%), Query Frame = 1
Query:    1 NMKHMLSAHGFFVPDQEYLVDCSGMLEYLGEKVGLGNVCLYCN---RLFPSLAAVRAHMGAKAHCKLQYEEGVDLEEYEDFYDF 243
            N+ HM + H FF+PD EYLVD +G++ YLGEK+ +GNVC+YCN   R F +L AVR HM  K+HCK+ Y++  D+ E  DFYDF
Sbjct:  160 NLTHMSTEHSFFIPDAEYLVDITGLITYLGEKIAVGNVCIYCNGTGREFRTLDAVRKHMSDKSHCKIAYDKEADMLEVADFYDF 243          
BLAST of mRNA_M-pyrifera_M_contig126648.5364.1 vs. uniprot
Match: A0A812RBR3_SYMMI (Znf622 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RBR3_SYMMI)

HSP 1 Score: 102 bits (254), Expect = 7.960e-25
Identity = 45/78 (57.69%), Postives = 59/78 (75.64%), Query Frame = 1
Query:   10 HMLSAHGFFVPDQEYLVDCSGMLEYLGEKVGLGNVCLYCNRLFPSLAAVRAHMGAKAHCKLQYEEGVDLEEYEDFYDF 243
            HM +  GFF+P++EYLVD  G L YLGEKV +G +CLYC + F     ++ HM +K+HCK+ YEEGVDL+E+EDFYDF
Sbjct:   30 HMQTNFGFFIPEKEYLVDLPGFLVYLGEKVKIGGICLYCQKQFRPGRPLQNHMQSKSHCKIAYEEGVDLDEFEDFYDF 107          
BLAST of mRNA_M-pyrifera_M_contig126648.5364.1 vs. uniprot
Match: A0A0C3NNB9_PHLGI (Uncharacterized protein n=1 Tax=Phlebiopsis gigantea 11061_1 CR5-6 TaxID=745531 RepID=A0A0C3NNB9_PHLGI)

HSP 1 Score: 105 bits (261), Expect = 1.010e-24
Identity = 50/84 (59.52%), Postives = 60/84 (71.43%), Query Frame = 1
Query:    1 NMKHMLSAHGFFVPDQEYLVDCSGMLEYLGEKVGLGNVCLYCN---RLFPSLAAVRAHMGAKAHCKLQYEEGVDLEEYEDFYDF 243
            N+ HM SAH FF+PD EYLVD +G++ YLGEK+ +GNVC+YCN   R F +L AVR HM  K HCKL Y+  VD  E  DFYDF
Sbjct:  201 NLTHMSSAHSFFIPDAEYLVDLTGLITYLGEKIAVGNVCIYCNGKGREFRTLDAVRKHMTDKGHCKLAYDSEVDRLELSDFYDF 284          
BLAST of mRNA_M-pyrifera_M_contig126648.5364.1 vs. uniprot
Match: A0A8H7Q0N4_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7Q0N4_MORIS)

HSP 1 Score: 103 bits (257), Expect = 1.870e-24
Identity = 50/84 (59.52%), Postives = 57/84 (67.86%), Query Frame = 1
Query:    1 NMKHMLSAHGFFVPDQEYLVDCSGMLEYLGEKVGLGNVCLYCN---RLFPSLAAVRAHMGAKAHCKLQYEEGVDLEEYEDFYDF 243
            NM HM  AH FF+PD EYL D SG+++YLGEK+ +GN CLYCN   R   SL AVRAHM  K HCK+ YE   D  E  DFYDF
Sbjct:  177 NMTHMTKAHSFFIPDIEYLADLSGLIKYLGEKISVGNTCLYCNGKGRAIKSLEAVRAHMLDKGHCKIAYESEEDAMEVVDFYDF 260          
BLAST of mRNA_M-pyrifera_M_contig126648.5364.1 vs. uniprot
Match: A0A0L0HDV2_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HDV2_SPIPD)

HSP 1 Score: 103 bits (258), Expect = 2.090e-24
Identity = 51/84 (60.71%), Postives = 61/84 (72.62%), Query Frame = 1
Query:    1 NMKHMLSAHGFFVPDQEYLVDCSGMLEYLGEKVGLGNVCLYCN---RLFPSLAAVRAHMGAKAHCKLQYEEGVDLEEYEDFYDF 243
            NM+HM  AH FF+PD EYLVD  G+++YLGEKV +G+VCLYCN   R   SL AVR HM  K HCK+ YE+G +LE   DFYDF
Sbjct:  217 NMEHMAKAHSFFIPDIEYLVDLKGLIKYLGEKVAVGHVCLYCNGKGRAMHSLEAVRKHMVDKGHCKILYEDGAELE-IADFYDF 299          
BLAST of mRNA_M-pyrifera_M_contig126648.5364.1 vs. uniprot
Match: A0A165AA89_9AGAM (C2H2-type domain-containing protein n=2 Tax=Sistotremastrum TaxID=139133 RepID=A0A165AA89_9AGAM)

HSP 1 Score: 103 bits (256), Expect = 4.230e-24
Identity = 47/84 (55.95%), Postives = 62/84 (73.81%), Query Frame = 1
Query:    1 NMKHMLSAHGFFVPDQEYLVDCSGMLEYLGEKVGLGNVCLYCN---RLFPSLAAVRAHMGAKAHCKLQYEEGVDLEEYEDFYDF 243
            N+ HM SAH FF+PDQE+LVD +G++ YLGEK+ +GNVC+YCN   R F ++AAVR HM  K+HCK+ Y+   D  E  D+YDF
Sbjct:  192 NIAHMSSAHSFFIPDQEFLVDLAGLIRYLGEKIAVGNVCIYCNGKGREFRTVAAVRKHMTDKSHCKIAYDSESDRLEVSDYYDF 275          
BLAST of mRNA_M-pyrifera_M_contig126648.5364.1 vs. uniprot
Match: A0A015JZ34_RHIIW (Reh1p n=9 Tax=Rhizophagus TaxID=1129544 RepID=A0A015JZ34_RHIIW)

HSP 1 Score: 102 bits (254), Expect = 4.490e-24
Identity = 43/81 (53.09%), Postives = 60/81 (74.07%), Query Frame = 1
Query:    1 NMKHMLSAHGFFVPDQEYLVDCSGMLEYLGEKVGLGNVCLYCNRLFPSLAAVRAHMGAKAHCKLQYEEGVDLEEYEDFYDF 243
            NM+HM   H FF+P+ EYL+D  G+++YLGEK+ +GNVCLYC++   SL +VR HM  K HCK+ YE   D+ E+++FYDF
Sbjct:  167 NMRHMTKIHSFFIPEIEYLIDSHGLIKYLGEKISIGNVCLYCSKGTKSLESVRRHMVDKGHCKIAYETEEDIMEFDEFYDF 247          
BLAST of mRNA_M-pyrifera_M_contig126648.5364.1 vs. uniprot
Match: A0A7H9B184_ZYGMR (Uncharacterized protein n=1 Tax=Zygotorulaspora mrakii TaxID=42260 RepID=A0A7H9B184_ZYGMR)

HSP 1 Score: 101 bits (252), Expect = 9.250e-24
Identity = 46/81 (56.79%), Postives = 60/81 (74.07%), Query Frame = 1
Query:    1 NMKHMLSAHGFFVPDQEYLVDCSGMLEYLGEKVGLGNVCLYCNRLFPSLAAVRAHMGAKAHCKLQYEEGVDLEEYEDFYDF 243
            N++HM   HGF++P+Q+YLVD  G+L+Y+ EK+GLGNVCL CN    S+ AVRAHM AK HC++ YEE  D  E  +FYDF
Sbjct:  178 NLEHMFKDHGFYIPEQKYLVDRDGLLKYIAEKIGLGNVCLVCNYQGRSVEAVRAHMLAKRHCRIPYEEQDDQLEISEFYDF 258          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126648.5364.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2Y1U9_9STRA2.610e-2663.86Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A4Y9ZZN4_9AGAM2.760e-2557.14C2H2-type domain-containing protein n=1 Tax=Herici... [more]
A0A4Y9ZN80_9AGAM5.800e-2554.76C2H2-type domain-containing protein (Fragment) n=1... [more]
A0A812RBR3_SYMMI7.960e-2557.69Znf622 protein n=1 Tax=Symbiodinium microadriaticu... [more]
A0A0C3NNB9_PHLGI1.010e-2459.52Uncharacterized protein n=1 Tax=Phlebiopsis gigant... [more]
A0A8H7Q0N4_MORIS1.870e-2459.52Uncharacterized protein n=1 Tax=Mortierella isabel... [more]
A0A0L0HDV2_SPIPD2.090e-2460.71Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
A0A165AA89_9AGAM4.230e-2455.95C2H2-type domain-containing protein n=2 Tax=Sistot... [more]
A0A015JZ34_RHIIW4.490e-2453.09Reh1p n=9 Tax=Rhizophagus TaxID=1129544 RepID=A0A0... [more]
A0A7H9B184_ZYGMR9.250e-2456.79Uncharacterized protein n=1 Tax=Zygotorulaspora mr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig126648contigM-pyrifera_M_contig126648:151..460 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score105.9
Seed ortholog evalue8.8e-21
Seed eggNOG ortholog109760.SPPG_05447T0
Preferred nameREI1
KEGG koko:K14816
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000278,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006810,GO:0006913,GO:0007049,GO:0007114,GO:0007117,GO:0008150,GO:0009987,GO:0015934,GO:0019954,GO:0022414,GO:0022613,GO:0022625,GO:0022626,GO:0030684,GO:0030687,GO:0032505,GO:0032991,GO:0040007,GO:0042254,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043565,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046907,GO:0051169,GO:0051179,GO:0051234,GO:0051301,GO:0051641,GO:0051649,GO:0071840,GO:0097159,GO:1901363,GO:1990904
EggNOG free text desc.Zinc finger protein
EggNOG OGs38CWN@33154,3NX8I@4751,KOG2785@1,KOG2785@2759
COG Functional cat.H
Best tax levelFungi
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Exons2
Model size243
Cds size240
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig126648.5364.1prot_M-pyrifera_M_contig126648.5364.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig126648 154..460 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815780.618202-UTR-M-pyrifera_M_contig126648:150..1531622815780.618202-UTR-M-pyrifera_M_contig126648:150..153Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig126648 151..153 +
1692277566.1424756-UTR-M-pyrifera_M_contig126648:150..1531692277566.1424756-UTR-M-pyrifera_M_contig126648:150..153Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig126648 151..153 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815780.6326253-CDS-M-pyrifera_M_contig126648:153..2461622815780.6326253-CDS-M-pyrifera_M_contig126648:153..246Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig126648 154..246 +
1692277566.1546943-CDS-M-pyrifera_M_contig126648:153..2461692277566.1546943-CDS-M-pyrifera_M_contig126648:153..246Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig126648 154..246 +
1622815780.6474016-CDS-M-pyrifera_M_contig126648:313..4601622815780.6474016-CDS-M-pyrifera_M_contig126648:313..460Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig126648 314..460 +
1692277566.1640906-CDS-M-pyrifera_M_contig126648:313..4601692277566.1640906-CDS-M-pyrifera_M_contig126648:313..460Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig126648 314..460 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig126648.5364.1

>prot_M-pyrifera_M_contig126648.5364.1 ID=prot_M-pyrifera_M_contig126648.5364.1|Name=mRNA_M-pyrifera_M_contig126648.5364.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=80bp
MKHMLSAHGFFVPDQEYLVDCSGMLEYLGEKVGLGNVCLYCNRLFPSLAA
VRAHMGAKAHCKLQYEEGVDLEEYEDFYDF
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mRNA from alignment at M-pyrifera_M_contig126648:151..460+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig126648.5364.1 ID=mRNA_M-pyrifera_M_contig126648.5364.1|Name=mRNA_M-pyrifera_M_contig126648.5364.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=310bp|location=Sequence derived from alignment at M-pyrifera_M_contig126648:151..460+ (Macrocystis pyrifera P11B4 male)
AACATGAAGCACATGCTGTCTGCACACGGCTTCTTCGTGCCTGACCAAGA ATACTTGGTGGACTGCTCTGGTATGTTGGAGTACCTAGGCGAGAAGGTAC GTGCGCATGCGAGCGCGCGCGCGCGCGTGTGCGATTCTGACGGAACTCTC TTCCCCTGTGCAGGTTGGCCTCGGCAATGTGTGTCTGTACTGCAACCGCC TGTTTCCGTCGCTGGCGGCTGTGCGTGCGCACATGGGCGCCAAGGCACAC TGCAAGCTGCAGTACGAAGAGGGGGTGGATTTGGAGGAGTACGAGGACTT TTATGACTTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig126648:151..460+

>mRNA_M-pyrifera_M_contig126648.5364.1 ID=mRNA_M-pyrifera_M_contig126648.5364.1|Name=mRNA_M-pyrifera_M_contig126648.5364.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=480bp|location=Sequence derived from alignment at M-pyrifera_M_contig126648:151..460+ (Macrocystis pyrifera P11B4 male)
ATGAAGCACATGCTGTCTGCACACGGCTTCTTCGTGCCTGACCAAGAATA
CTTGGTGGACTGCTCTGGTATGTTGGAGTACCTAGGCGAGAAGATGAAGC
ACATGCTGTCTGCACACGGCTTCTTCGTGCCTGACCAAGAATACTTGGTG
GACTGCTCTGGTATGTTGGAGTACCTAGGCGAGAAGGTTGGCCTCGGCAA
TGTGTGTCTGTACTGCAACCGCCTGTTTCCGTCGCTGGCGGCTGTGCGTG
CGCACATGGGCGCCAAGGCACACTGCAAGCTGCAGTACGAAGAGGGGGTG
GATTTGGAGGAGTACGAGGACTTTTATGACTTCGTTGGCCTCGGCAATGT
GTGTCTGTACTGCAACCGCCTGTTTCCGTCGCTGGCGGCTGTGCGTGCGC
ACATGGGCGCCAAGGCACACTGCAAGCTGCAGTACGAAGAGGGGGTGGAT
TTGGAGGAGTACGAGGACTTTTATGACTTC
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