mRNA_M-pyrifera_M_contig1266.5355.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1266.5355.1 vs. uniprot
Match: D8LTX0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTX0_ECTSI) HSP 1 Score: 766 bits (1978), Expect = 8.120e-252 Identity = 492/938 (52.45%), Postives = 600/938 (63.97%), Query Frame = 1
Query: 1 DPFVRLRAEIMAERCLAKAPTLARKAYTTVAIGDAAIVASTPAAVLQE------PSVVAVDFSWLPWGHGDEAIHTVG------DFEAAQAAAREAEDNYTLADNLEGALKARRTELSLRGDEALVAVAPLLDQRYGRIEKSTELCEQAQECFLFADREGLAGATADVKAAIHMVKRLASGDAVVLEAEAAALGDAASDRAVELLRKAKSFYHDAQISYEGLVDQVTSLLEERPDDAAAVRKAMDLQDNINEIYDRRDTETGFVDVRRDGQRAVKVESRLDCLAADASLENLAQVVDHGQFEGARTLLSSASLVYERYADQARLSKAAQAGAKTAVLLRVRAAGDVDRATALTLLGEGDFEAARAAAASASVRFKWWA--------SHGAEEE---DPRSDEDR-QNVVRQAEELTARIATASGKAQAEQLTTEGRGFKATGDCPGAVRALSAAAKLFRDVGMLEAAAATHAEASRTEAETVLSTCTSLHRDGKFDTVAEQLQKAEGLLLEATRQXXXXXXXXXXXXXVGVPAAKE-------QQQGD-------PVDDAAK-----VTNAVHAHDNDDAPADGLAQTLLDDLHNLRFRVAGDVVMRGVAPALEEREYDLALRLMLEADGQYARIKAGRWVTSAV----VAAGKTNA-GGAASSPKELAVKRAAQDGDRLRSDAASAILKDKNPTKAKELLSRAEACMVWASVDPFVAGAGAVAKDIRVFEARAEGDKKCQGLARLLLGRESERANEMFEEALSKYRQGDAFKQIADMRAIMFCVERETKLCRDVISTVAANDPTACLKMLEETRPVFKIGADMKSAVLKDVVDLMGIKYRHIVLLSAICRAWVQCLHGISICSGGETVPGHPDAGLKEALSDLQALTISGGAAALDIPFCLLQDACSGVSA-----RRTPSPPPSPEALKEASESTA 2655
D RLRA ++A+RCLAKA +LA A T + A AA Q P++ L GD + DFEAA+AA +EAE+NY A N GAL ARR E+SLRGDEA+V++ LL++R G +E S LCEQAQ CF F DRE LA ATADV AAIHMV RLASGDA V AEAA + ASD A + LR+AKSFYH AQ+SYE LVDQVT+LLEERP D A R AM+LQDNIN IYD RRDGQRAV VE RLDCLAAD SLENLAQVVDH QFE ARTLLS+A+ VYER AD+ARLSK + GAKTAVLLRVR+AG+ DRA+AL LL FEAA AA SA R WWA S G + E + R + DR Q VVR AEELT +A A G+A+AE L +GRG KA GD AV+ L +AA+LF D G+ + A T EA+RT+AE +L T LH +G F+ +AE L +AE LLL+A ++ + A + GD VD K V + V DD +LDDL NLR RVAGD+VMRGVAPAL+ REYD LRL+ EA+ Y IKAGRW+TS VAAGK N+ +S+PKEL KRAA DGD+LR+ AA+AI K+KNP KA+ELLS AEACM WA VDPF AGA AV+KDI VFE+R GD+ C+GL LL RE ER + EEALSKYRQGDAFKQIAD RAIMFCVERE++LC VIS ++A DP A LKMLEE RPVF+I A+++SAVL++ +L+G+K++HI +LS +CRAW+ C++G+ S E P +P L A+SDL+ L ++ G + LD+P L +++C VSA R TPS S +A ST+
Sbjct: 599 DGAARLRAGLVADRCLAKASSLAPPAAAT-STAFATTXXXXXAATAQRSETGTNPAIGVDGEQRLAPVMGDGGVXXXXXXXRERDFEAARAAVKEAEENYETAGNEMGALVARRMEMSLRGDEAMVSIDTLLEKRGGDVEASRTLCEQAQSCFSFVDREALADATADVYAAIHMVTRLASGDAAVAAAEAA-FAEGASDNAAQFLREAKSFYHRAQLSYEDLVDQVTTLLEERPGDLEAARNAMELQDNINAIYDS----------RRDGQRAVYVELRLDCLAADTSLENLAQVVDHEQFEDARTLLSAAAQVYERSADKARLSKGGENGAKTAVLLRVRSAGEADRASALDLLERKHFEAAERAAFSARERLMWWADNHEDSGDSGGGDSEAEGERRLERDRRQAVVRAAEELTTSVAAAVGQARAEGLMEKGRGLKAMGDYVAAVKTLRSAAELFHDAGLAQEALVTRTEAARTQAEALLLTSVELHGEGNFEAIAEHLDRAEALLLDAQKEVAGSTLVAADGTTITSTATAQLSLVGLPSTSGDVDIGRAITVDSGKKCGGSDVGSHVLPGIEDDQDGAWAQCHILDDLVNLRSRVAGDIVMRGVAPALDAREYDEGLRLLQEAEAHYTTIKAGRWMTSVAAAVAVAAGKENSLSSPSSTPKELVTKRAAHDGDQLRAKAATAIQKEKNPVKARELLSGAEACMAWAGVDPFAAGAAAVSKDINVFESREAGDEICKGLIGLLREREFERGKGILEEALSKYRQGDAFKQIADTRAIMFCVERESELCAGVISAISARDPVAALKMLEEARPVFQIAAELRSAVLQEAAELIGMKHQHITILSTLCRAWMNCVNGVFPASSDEDGPPNPAGVLDRAMSDLRTL-VASGVSVLDVPLDLFRESCDSVSAGIVKTRTTPSQEASVAQAADAESSTS 1523
BLAST of mRNA_M-pyrifera_M_contig1266.5355.1 vs. uniprot
Match: A0A6H5KCJ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ1_9PHAE) HSP 1 Score: 639 bits (1649), Expect = 1.340e-205 Identity = 419/838 (50.00%), Postives = 507/838 (60.50%), Query Frame = 1
Query: 478 IHMVKRLASGDAVVLEAEAAALGDAASDRAVELLRKAKSFYHDAQISYEGLVDQVTSLLEERPDDAAAVRKAMDLQDNINEIYDRRDTETGFVDVRRDGQRAVKVESRLDCLAADASLENLAQVVDHGQFEGARTLLSSASLVYERYADQARLSKAA---------------------------------------------------------QAGAKTAVLLRVRAAGDVDRATALTLLGEGDFEAARAAAASASVRFKWWASHG-------------AEEEDPRSDEDRQNVVRQAEELTARIATASGKAQAEQLTTEGRGFKATGDCPGAVRALSAAAKLFRDVGMLEAAAATHAEASRTEAETVLSTCTSLHRDGKFDTVAEQLQKAEGLLLEATRQXXXXXXXXXXXXXV---------GVPAAKEQQQGDPVDDAAKVT---------NAVHAH----DNDDAPADGLAQTLLDDLHNLRFRVAGDVVMRGVAPALEEREYDLALRLMLEADGQYARIKAGRWVTSAV----VAAGKTNA-GGAASSPKELAVKRAAQDGDRLRSDAASAILKDKNPTKAKELLSRAEACMVWASVDPFVAGAGAVAKDIRVFEARAEGDKKCQGLARLLLGRESERANEMFEEALSKYRQGDAFKQIADMRAIMFCVERETKLCRDVISTVAANDPTACLKMLEETRPVFKIGADMKSAVLKDVVDLMGIKYRHIVLLSAICRAWVQCLHGISICSGGETVPGHPDAGLKEALSDLQALTISGGAAALDIPFCLLQDACSGVSA-----RRTPSPPPS------PEALKEASESTASTIP 2667
IHMV RLASGDA V AEAA D ASD+A + LR+AKS YH AQ++YE LVDQVT+LLEERP D A R AM+LQDNIN IYD RRDGQRAV VE RLDCLAAD SL NLAQVVDH QFE ARTLLS+A+ VYER AD+ARLSK ++GAKTAVLLRVR+AGD DRA+AL LL DFEAA AA SA R WWA + AE E + RQ VVR AEELT IA A G+A+AE L +GR KA GD AV+ L +AA+LF D G+ A T EA+RT+AE +L T LH +G F+ +AE L +AE LLL+A + VP GD VD VT + V +H DD +LDDL +LR RVAGD+VMRGVAPAL+ REYD LRL+ EA+ Y IKAGRW+TS VAAGK N+ +S+PKEL KRAA DGDRLR+ AA+AI K+KNP KA+ELLSRAEACM WA VDPF AGA AV+KDI VFE+RA GD+ C+GL LL RE ERA + EEALSKYRQGDAFKQIAD RA MFCVERE++LC DVIS ++A DP A LKMLEE RPVF+I A+++SAVL++ V+L+G+K++HI++LS +CRAW+ C++G+ S E +P L A+ DL+ L ++ G + LD+P L+Q++C VSA R TPSP S PE+ SE+ A+ P
Sbjct: 3 IHMVTRLASGDAAVAAAEAA-FADGASDKAAQFLREAKSSYHRAQLAYEDLVDQVTTLLEERPGDLEAARNAMELQDNINAIYDS----------RRDGQRAVNVELRLDCLAADTSLANLAQVVDHEQFEDARTLLSAAAQVYERSADKARLSKVGKISSLVNLIESSSRALVEGRYADAEGLVAESLVVRAALAVEQPLCLRPPDCALCQDGESGAKTAVLLRVRSAGDADRASALDLLERKDFEAAERAAFSARERLTWWADNHEDGGDRGGGGDSEAEGERGLERDQRQAVVRAAEELTTSIAAAVGQARAEGLMEKGRELKAMGDYVAAVKTLRSAAELFHDAGLAHEALVTRTEAARTQAEALLLTSVELHGEGNFEAIAEHLDRAEALLLDARNEVAGSTLVAAAGTTFTSAAMAQPSSVPLGLPSTSGD-VDIVRAVTVGSGKKCGGSDVGSHVLPGTEDDRDGAWAQYHILDDLVHLRSRVAGDIVMRGVAPALDAREYDEGLRLLQEAEAHYTTIKAGRWMTSVAAAVAVAAGKENSLSSPSSTPKELVTKRAAHDGDRLRAKAATAIQKEKNPVKARELLSRAEACMAWAGVDPFAAGAAAVSKDINVFESRAGGDEICKGLIGLLREREFERAKGILEEALSKYRQGDAFKQIADTRATMFCVERESELCTDVISALSARDPAAALKMLEEARPVFQIAAELRSAVLQEAVELIGMKHQHIIILSTLCRAWMNCVNGVVPASNDEVNTPNPAGVLDRAMFDLRTL-VASGVSLLDVPLDLVQESCDSVSAGIVKTRATPSPEASVAQVADPESSTSESEAVAALSP 827
BLAST of mRNA_M-pyrifera_M_contig1266.5355.1 vs. uniprot
Match: A0A6H5K7F2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7F2_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 5.790e-10 Identity = 57/135 (42.22%), Postives = 74/135 (54.81%), Query Frame = 1
Query: 1 DPFVRLRAEIMAERCLAKAPTLA------RKAYTTVAIGDAAIVASTPAAVLQEPSVVAVDFSWLPWGHGDEAIHTVG------DFEAAQAAAREAEDNYTLADNLEGALKARRTELSLRGDEALVAVAPLLDQR 369
D RLRA ++A+RCLAKA +LA A+ T AA A A P++ L GD + G DFEAA+AA +EAE+NY A N G L ARR E+SLRGDEA+V++ PLL++R
Sbjct: 654 DKAARLRAGLVADRCLAKASSLAPPAAATSTAFATTXXXXAAADAQRSEA-RTTPAIGVDGEQRLAPVMGDGGVGVEGGGGRERDFEAARAAVKEAEENYETAGNEMGVLVARRMEMSLRGDEAMVSIDPLLEKR 787 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1266.5355.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1266.5355.1 >prot_M-pyrifera_M_contig1266.5355.1 ID=prot_M-pyrifera_M_contig1266.5355.1|Name=mRNA_M-pyrifera_M_contig1266.5355.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=883bp MAERCLAKAPTLARKAYTTVAIGDAAIVASTPAAVLQEPSVVAVDFSWLPback to top mRNA from alignment at M-pyrifera_M_contig1266:14445..27225- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1266.5355.1 ID=mRNA_M-pyrifera_M_contig1266.5355.1|Name=mRNA_M-pyrifera_M_contig1266.5355.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=12781bp|location=Sequence derived from alignment at M-pyrifera_M_contig1266:14445..27225- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1266:14445..27225- >mRNA_M-pyrifera_M_contig1266.5355.1 ID=mRNA_M-pyrifera_M_contig1266.5355.1|Name=mRNA_M-pyrifera_M_contig1266.5355.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=5298bp|location=Sequence derived from alignment at M-pyrifera_M_contig1266:14445..27225- (Macrocystis pyrifera P11B4 male)back to top |