mRNA_M-pyrifera_M_contig126464.5333.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig126464.5333.1 vs. uniprot
Match: A0A2D6U5S8_9ACTN (Dihydrofolate reductase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6U5S8_9ACTN) HSP 1 Score: 188 bits (477), Expect = 3.070e-57 Identity = 90/112 (80.36%), Postives = 97/112 (86.61%), Query Frame = 1
Query: 1 IDQWRPALEAAGFEVVVPDIPGQHLEGDALVTALNGCVGVVAGDDKFTAEVQDRLPELRVISKWGIGVDGIDRPHAATRGTVVTNTPGAFDEEVADVAMAYAVMLARQLHVI 336
I+ WRPALE AGFEVVVP+IPGQHLEGDALV AL+GC+GVVAGDDKFTA V D LP L+VISKWGIGVDGIDR HAA +G VTNTPGAFDEEVADVA Y VML RQLH+I
Sbjct: 14 IEDWRPALEGAGFEVVVPEIPGQHLEGDALVAALDGCIGVVAGDDKFTAGVIDHLPSLKVISKWGIGVDGIDRAHAAAKGIPVTNTPGAFDEEVADVAYGYIVMLLRQLHII 125
BLAST of mRNA_M-pyrifera_M_contig126464.5333.1 vs. uniprot
Match: A0A800LR20_9ACTN (Dihydrofolate reductase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A800LR20_9ACTN) HSP 1 Score: 164 bits (414), Expect = 9.150e-48 Identity = 79/112 (70.54%), Postives = 92/112 (82.14%), Query Frame = 1
Query: 1 IDQWRPALEAAGFEVVVPDIPGQHLEGDALVTALNGCVGVVAGDDKFTAEVQDRLPELRVISKWGIGVDGIDRPHAATRGTVVTNTPGAFDEEVADVAMAYAVMLARQLHVI 336
I+ + P+LEAAGFEV +P+I GQHLEG LV AL+GCVGVVAGDD+FTAEV D+ P L+ ISKWGIGVDGID+ AA RG VTNTPGAFD+EVADV MAY V+L RQLH +
Sbjct: 14 IEAYLPSLEAAGFEVALPEISGQHLEGAELVAALDGCVGVVAGDDQFTAEVLDQSPNLKAISKWGIGVDGIDKGAAAQRGIPVTNTPGAFDDEVADVTMAYCVLLLRQLHAV 125
BLAST of mRNA_M-pyrifera_M_contig126464.5333.1 vs. uniprot
Match: A0A800IDQ7_9ACTN (Dihydrofolate reductase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A800IDQ7_9ACTN) HSP 1 Score: 159 bits (401), Expect = 8.190e-46 Identity = 78/112 (69.64%), Postives = 89/112 (79.46%), Query Frame = 1
Query: 1 IDQWRPALEAAGFEVVVPDIPGQHLEGDALVTALNGCVGVVAGDDKFTAEVQDRLPELRVISKWGIGVDGIDRPHAATRGTVVTNTPGAFDEEVADVAMAYAVMLARQLHVI 336
I+ + PAL AAGFEV +P+I GQHLEG LVTAL GCVGVVAGDD+FTAEV D +L+ ISKWGIGVDGID+ AA R VTNTPGAFD+EVADV MAY V+L RQLH +
Sbjct: 14 IEAYLPALTAAGFEVQLPEIAGQHLEGTELVTALEGCVGVVAGDDQFTAEVLDHCLDLKAISKWGIGVDGIDKEAAALRNIPVTNTPGAFDDEVADVTMAYCVLLLRQLHAV 125
BLAST of mRNA_M-pyrifera_M_contig126464.5333.1 vs. uniprot
Match: A0A382V7X1_9ZZZZ (2-Hacid_dh domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382V7X1_9ZZZZ) HSP 1 Score: 144 bits (364), Expect = 1.510e-42 Identity = 74/112 (66.07%), Postives = 84/112 (75.00%), Query Frame = 1
Query: 1 IDQWRPALEAAGFEVVVPDIPGQHLEGDALVTALNGCVGVVAGDDKFTAEVQDRLPELRVISKWGIGVDGIDRPHAATRGTVVTNTPGAFDEEVADVAMAYAVMLARQLHVI 336
++ +RPALE AG EVV P IPGQ L GDALV AL GC GVVAGDD+FTA+V +RLP LR I+KWGIGVD ID A G VTNTPG F EVADV +AY V+LAR LH+I
Sbjct: 14 LEGFRPALEEAGIEVVAPSIPGQFLVGDALVEALAGCDGVVAGDDRFTADVLERLPGLRAIAKWGIGVDSIDFEAAERLGIEVTNTPGEFAAEVADVTLAYVVILARGLHLI 125
BLAST of mRNA_M-pyrifera_M_contig126464.5333.1 vs. uniprot
Match: A0A7V1V1R7_9BACT (Dihydrofolate reductase n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A7V1V1R7_9BACT) HSP 1 Score: 110 bits (274), Expect = 6.130e-27 Identity = 54/112 (48.21%), Postives = 73/112 (65.18%), Query Frame = 1
Query: 1 IDQWRPALEAAGFEVVVPDIPGQHLEGDALVTALNGCVGVVAGDDKFTAEVQDRLPELRVISKWGIGVDGIDRPHAATRGTVVTNTPGAFDEEVADVAMAYAVMLARQLHVI 336
ID +RP G EV +P + Q + L+ ++G G++AGDD+ TA V +R LRVISKWG+G+D ID AA RG + +TPG F +EVADVAM Y ++LAR+LH I
Sbjct: 15 IDGYRPLFADCGIEVALPPVE-QRMTAPRLMDLIDGFDGIIAGDDELTAAVLERADRLRVISKWGVGIDSIDLAAAARRGIQIFHTPGVFADEVADVAMGYLILLARRLHTI 125
BLAST of mRNA_M-pyrifera_M_contig126464.5333.1 vs. uniprot
Match: A0A2R6J465_9EURY (2-Hacid_dh domain-containing protein n=1 Tax=Halobacteriales archaeon QS_5_70_15 TaxID=1919180 RepID=A0A2R6J465_9EURY) HSP 1 Score: 101 bits (251), Expect = 2.230e-24 Identity = 54/110 (49.09%), Postives = 68/110 (61.82%), Query Frame = 1
Query: 1 IDQWRPALEAAGFEVVVPDIPGQHLEGDALVTALNGCVGVVAGDDKFTAEVQDRLPELRVISKWGIGVDGIDRPHAATRGTVVTNTPGAFDEEVADVAMAYAVMLARQLH 330
ID + L + G V D+ Q L+ D L+ L G++AGDD+ TA V + P L VI+KWGIG DGID A G V NTPGAF +EVADV + YA+MLAR+LH
Sbjct: 36 IDDYADLLASYGIAYDVADVD-QQLDEDELLDLLPDYDGILAGDDELTARVIEASPRLEVIAKWGIGTDGIDFDAAEAHGVRVFNTPGAFADEVADVVIGYAIMLARELH 144
BLAST of mRNA_M-pyrifera_M_contig126464.5333.1 vs. uniprot
Match: A0A1M7P7U8_9HYPH (D-3-phosphoglycerate dehydrogenase n=1 Tax=Roseibium suaedae TaxID=735517 RepID=A0A1M7P7U8_9HYPH) HSP 1 Score: 102 bits (255), Expect = 4.800e-24 Identity = 50/109 (45.87%), Postives = 70/109 (64.22%), Query Frame = 1
Query: 1 IDQWRPALEAAGFEVVVPDIPGQHLEGDALVTALNGCVGVVAGDDKFTAEVQD--RLPELRVISKWGIGVDGIDRPHAATRGTVVTNTPGAFDEEVADVAMAYAVMLAR 321
+ + E AG E +VP++ GQ L+ D +++ + G G++AGDD +V D + +L+ I KWGIGVDGID HA + G V NTPG F EEVADVA ++ +MLAR
Sbjct: 14 VSDFSGLFEKAGIEAIVPEVKGQQLDADEMLSLIEGIDGIIAGDDIINKKVIDAGKASKLKAIVKWGIGVDGIDLVHARSVGMPVFNTPGCFSEEVADVAYSHLLMLAR 122
BLAST of mRNA_M-pyrifera_M_contig126464.5333.1 vs. uniprot
Match: A0YTW0_LYNSP (D-isomer specific 2-hydroxyacid dehydrogenase family protein n=1 Tax=Lyngbya sp. (strain PCC 8106) TaxID=313612 RepID=A0YTW0_LYNSP) HSP 1 Score: 102 bits (253), Expect = 7.930e-24 Identity = 52/110 (47.27%), Postives = 72/110 (65.45%), Query Frame = 1
Query: 1 IDQWRPALEAAGFEVVVPDIPGQHLEGDALVTALNGCVGVVAGDDKFTAEVQDRLPELRVISKWGIGVDGIDRPHAATRGTVVTNTPGAFDEEVADVAMAYAVMLARQLH 330
ID +R L G E+ VP + Q E + L+ ++ GV+AGDD FTA+V ++ L++++KWGIGVDGIDR A G +V NTP F +EVADVA+ Y ++LAR LH
Sbjct: 16 IDIYRERLVEKGIELEVPSVVQQLSEAE-LLEIIDRFDGVIAGDDPFTAKVLEKGKRLKIVAKWGIGVDGIDRDAANRLGILVKNTPDVFSDEVADVALGYIILLARHLH 124
BLAST of mRNA_M-pyrifera_M_contig126464.5333.1 vs. uniprot
Match: A0A2E2Q2C1_9ACTN (Hydroxyacid dehydrogenase n=1 Tax=Nocardioides sp. TaxID=35761 RepID=A0A2E2Q2C1_9ACTN) HSP 1 Score: 101 bits (252), Expect = 8.980e-24 Identity = 47/112 (41.96%), Postives = 67/112 (59.82%), Query Frame = 1
Query: 1 IDQWRPALEAAGFEVVVPDIPGQHLEGDALVTALNGCVGVVAGDDKFTAEVQDRLPELRVISKWGIGVDGIDRPHAATRGTVVTNTPGAFDEEVADVAMAYAVMLARQLHVI 336
+D R + AG++V+ P +PGQH L + G G++AGDD+ + P+LRV+ +WGIG+D +D AA G V NTPG F EVAD AM Y ++LAR H++
Sbjct: 5 LDAHRKRIIDAGYDVLSPQVPGQHFSSAELSDMMGGVAGLIAGDDELDRRFFECSPDLRVLIRWGIGMDSVDHQAAAEHGVTVRNTPGVFGGEVADSAMGYILLLARGHHLV 116
BLAST of mRNA_M-pyrifera_M_contig126464.5333.1 vs. uniprot
Match: A0A1J1LIQ2_9CYAN (D-isomer specific 2-hydroxyacid dehydrogenase family protein n=2 Tax=Planktothrix TaxID=54304 RepID=A0A1J1LIQ2_9CYAN) HSP 1 Score: 101 bits (252), Expect = 1.090e-23 Identity = 52/110 (47.27%), Postives = 70/110 (63.64%), Query Frame = 1
Query: 1 IDQWRPALEAAGFEVVVPDIPGQHLEGDALVTALNGCVGVVAGDDKFTAEVQDRLPELRVISKWGIGVDGIDRPHAATRGTVVTNTPGAFDEEVADVAMAYAVMLARQLH 330
ID +R E+VVPDI Q E + L+ ++ GV+AGDD FTA+V + L++++KWGIGVD IDR A G +V NTP F +EVADVA+ Y ++LAR LH
Sbjct: 16 IDHYRSFFAERNIEIVVPDIVQQMSEAE-LLEIIDQFDGVIAGDDPFTAKVLAQGKRLKIVAKWGIGVDSIDRDAAKELGILVKNTPDVFSDEVADVALGYIILLARHLH 124 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126464.5333.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig126464.5333.1 >prot_M-pyrifera_M_contig126464.5333.1 ID=prot_M-pyrifera_M_contig126464.5333.1|Name=mRNA_M-pyrifera_M_contig126464.5333.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=112bp IDQWRPALEAAGFEVVVPDIPGQHLEGDALVTALNGCVGVVAGDDKFTAEback to top mRNA from alignment at M-pyrifera_M_contig126464:174..509- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig126464.5333.1 ID=mRNA_M-pyrifera_M_contig126464.5333.1|Name=mRNA_M-pyrifera_M_contig126464.5333.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=336bp|location=Sequence derived from alignment at M-pyrifera_M_contig126464:174..509- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig126464:174..509- >mRNA_M-pyrifera_M_contig126464.5333.1 ID=mRNA_M-pyrifera_M_contig126464.5333.1|Name=mRNA_M-pyrifera_M_contig126464.5333.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=672bp|location=Sequence derived from alignment at M-pyrifera_M_contig126464:174..509- (Macrocystis pyrifera P11B4 male)back to top |