mRNA_M-pyrifera_M_contig12645.5326.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12645.5326.1 vs. uniprot
Match: D8LG61_ECTSI (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG61_ECTSI) HSP 1 Score: 184 bits (468), Expect = 2.130e-52 Identity = 107/173 (61.85%), Postives = 113/173 (65.32%), Query Frame = 1
Query: 1 YEFFPGSGAHDDIQSNIINAPLTPLWKVKESASNSARHSQGGGGGHGTRSRTSSLKAKQEPSERDMGSGAAPPTSSSSLLSAAGRTGRVCYREAVQRRLLPALRAFNPKLILLSAGFDAAKGDVGNCKQGRRGASGGLDLTSEDYLWTTEKIQSVADICCAGKMVSVLEGGYG 519
YEFFPGSG DD+QSNIIN PL PLWK K ARH G G G R R G GA P +L A+QRRLLPALRAFNP+LI+LSAGFDAAKGDVGNCKQG R A GLDL+SEDYLWTTEKIQSVADICC GKMVSVLEGGYG
Sbjct: 308 YEFFPGSGDQDDLQSNIINEPLDPLWKSK------ARHDDGYGAQGGGRQ------------GRXRGGGARHPQPD--VL-------------AIQRRLLPALRAFNPQLIMLSAGFDAAKGDVGNCKQGARAAREGLDLSSEDYLWTTEKIQSVADICCGGKMVSVLEGGYG 447
BLAST of mRNA_M-pyrifera_M_contig12645.5326.1 vs. uniprot
Match: D8LG60_ECTSI (Histone deactylase of possible bacterial origin with ankyrin repeats at the N-terminus n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG60_ECTSI) HSP 1 Score: 184 bits (468), Expect = 8.050e-51 Identity = 107/173 (61.85%), Postives = 113/173 (65.32%), Query Frame = 1
Query: 1 YEFFPGSGAHDDIQSNIINAPLTPLWKVKESASNSARHSQGGGGGHGTRSRTSSLKAKQEPSERDMGSGAAPPTSSSSLLSAAGRTGRVCYREAVQRRLLPALRAFNPKLILLSAGFDAAKGDVGNCKQGRRGASGGLDLTSEDYLWTTEKIQSVADICCAGKMVSVLEGGYG 519
YEFFPGSG DD+QSNIIN PL PLWK K ARH G G G R R G GA P +L A+QRRLLPALRAFNP+LI+LSAGFDAAKGDVGNCKQG R A GLDL+SEDYLWTTEKIQSVADICC GKMVSVLEGGYG
Sbjct: 1932 YEFFPGSGDQDDLQSNIINEPLDPLWKSK------ARHDDGYGAQGGGRQ------------GRXRGGGARHPQPD--VL-------------AIQRRLLPALRAFNPQLIMLSAGFDAAKGDVGNCKQGARAAREGLDLSSEDYLWTTEKIQSVADICCGGKMVSVLEGGYG 2071
BLAST of mRNA_M-pyrifera_M_contig12645.5326.1 vs. uniprot
Match: A0A1Z5JSY0_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSY0_FISSO) HSP 1 Score: 164 bits (415), Expect = 1.030e-43 Identity = 88/180 (48.89%), Postives = 114/180 (63.33%), Query Frame = 1
Query: 1 YEFFPGSGAHDDIQSNIINAPLTPLWKVKESASNSARHSQGGGGGHGTRSRTSSLKAKQEPSERDMGSGA-------APPTSSSSLLSAAGRTGRVCYREAVQRRLLPALRAFNPKLILLSAGFDAAKGDVGNCKQGRRGASGGLDLTSEDYLWTTEKIQSVADICCAGKMVSVLEGGYG 519
Y+F+PG+G+ DD+ NIIN P+ PLWK + S ++ + H TR + S + + S G G+ + TS S A+G++GR YREA+ RLLP+LRAFNP LI++SAGFDA KGDVGN + R G GLDL EDY WTT KI VAD+CC G++VSVLEGGYG
Sbjct: 949 YKFYPGTGSDDDLALNIINVPIVPLWKDQSSQASPVKT-------HNTRKKAKSTQDVVDDSSTGTGRGSDGASEGGSGSTSIGSPRHASGKSGRTAYREAILTRLLPSLRAFNPDLIIISAGFDACKGDVGNARHERGGEKMGLDLEPEDYAWTTRKILEVADMCCHGRVVSVLEGGYG 1121
BLAST of mRNA_M-pyrifera_M_contig12645.5326.1 vs. uniprot
Match: A0A1E7FK49_9STRA (Hist_deacetyl domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FK49_9STRA) HSP 1 Score: 153 bits (386), Expect = 1.480e-43 Identity = 87/181 (48.07%), Postives = 110/181 (60.77%), Query Frame = 1
Query: 1 YEFFPGSGAHDDIQSNIINAPLTPLWKVKESA----SNSARH---SQGGGGGHGTRSRTSSLKAKQEPSERDMGSGAAPPTSSSSLLSAAGRTGRVCYREAVQRRLLPALRAFNPKLILLSAGFDAAKGDVGNCKQGRRGASG-GLDLTSEDYLWTTEKIQSVADICCAGKMVSVLEGGYG 519
Y+F+PG+G DD+ NIIN P+TPLWK ++ RH ++G G+ S T + + E + S A+ P +A GR+ YR ++Q RLLPALRAFNP LIL+SAGFDA KGDVGN K G G+DL EDY WTT KI +ADICC G++VSVLEGGYG
Sbjct: 51 YKFYPGTGDEDDLPLNIINVPITPLWKEGNQTPVQREHNTRHRTRNRGSQSDDGSSSETGTPRVSDAEVESRIRSRASSPVP----FNANAPGGRMAYRNSIQNRLLPALRAFNPDLILISAGFDACKGDVGNAKHEMGGKEKMGIDLEPEDYAWTTRKILEIADICCQGRVVSVLEGGYG 227
BLAST of mRNA_M-pyrifera_M_contig12645.5326.1 vs. uniprot
Match: A0A7R9ZPI6_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZPI6_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.990e-42 Identity = 89/197 (45.18%), Postives = 114/197 (57.87%), Query Frame = 1
Query: 1 YEFFPGSGAHDDIQSNIINAPLTPLWKVKESASNSARHSQGGGGGHGTRSRTSSLKAKQEPSERDMGSGAAPPTSS---------SSLLSAAG---------------RTGRVCYREAVQRRLLPALRAFNPKLILLSAGFDAAKGDVGNCKQGRRGASGGLDLTSEDYLWTTEKIQSVADICCAGKMVSVLEGGYG 519
Y+F+PG+G DD+ NIIN P+ P+WK +A+ A S H TR +T + + ++ D+ S A P +S +SL SA +GRV YR A+Q RLLPALRAFNP LIL+SAGFDA++ DVGN K G+DL EDY WTT KI +ADICC G++VSVLEGGYG
Sbjct: 75 YKFYPGTGDEDDVAMNIINVPIMPMWKEPATATTPATRSS-----HNTRQKTRK-RTVDDKTDGDVSSDAGTPRASDVESIPNEATSLRSATTSPVPPGVSGNGGNGPNSGRVAYRNAIQSRLLPALRAFNPDLILISAGFDASRDDVGNAKHEVNRERRGMDLEPEDYAWTTRKILEIADICCQGRVVSVLEGGYG 265
BLAST of mRNA_M-pyrifera_M_contig12645.5326.1 vs. uniprot
Match: B7FXN5_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FXN5_PHATC) HSP 1 Score: 157 bits (397), Expect = 2.710e-41 Identity = 89/184 (48.37%), Postives = 108/184 (58.70%), Query Frame = 1
Query: 1 YEFFPGSGAHDDIQSNIINAPLTPLWKVKESASNSARHSQGGGGGHGTRSRT----------SSLKAKQEPSERDMGSGAAPPTSSSSLLSAAG-RTGRVCYREAVQRRLLPALRAFNPKLILLSAGFDAAKGDVGNCKQGRRGASGGLDLTSEDYLWTTEKIQSVADICCAGKMVSVLEGGYG 519
Y+F+PG+G+ DD+ NIIN P+ PLWK + + + H TR +T S K D+G S+S G +GR YR A+Q RLLPALRAFNP LIL+SAGFDAAKGDVGN + R G GLDL EDY WTT KI +ADICC G++VSVLEGGYG
Sbjct: 941 YKFYPGTGSEDDLALNIINVPIVPLWKEHSATVQPSIKT------HNTRRKTRTSQEGPDEESDTTPKDSSRTSDVGXXXXXXXXSNSSPRPGGLSSGRTAYRNAIQNRLLPALRAFNPDLILISAGFDAAKGDVGNARHERGGEKVGLDLEPEDYAWTTRKILEIADICCQGRVVSVLEGGYG 1118
BLAST of mRNA_M-pyrifera_M_contig12645.5326.1 vs. uniprot
Match: A0A6S8HTR1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A6S8HTR1_9STRA) HSP 1 Score: 157 bits (396), Expect = 3.690e-41 Identity = 87/182 (47.80%), Postives = 115/182 (63.19%), Query Frame = 1
Query: 1 YEFFPGSGAHDDIQSNIINAPLTPLWKVKESASNSA------RHSQGGG--GGHGTRSRTSSLKAKQEPSERDMGSGAAPPTSSSSLLSAAGRTGRVCYREAVQRRLLPALRAFNPKLILLSAGFDAAKGDVGNCKQGRRGASG-GLDLTSEDYLWTTEKIQSVADICCAGKMVSVLEGGYG 519
Y+F+PG+G+ DD+ NI+N P+ PLW+ + + A RH G T+ +S + D+ +G+ S++ + G +GRV YR+A+Q RLLPALRAFNP LIL+SAGFDAA+GDVGN + R G GLDL SEDY WTT KI +ADICC G++VSVLEGGYG
Sbjct: 910 YKFYPGTGSEDDLALNILNVPIQPLWRDQNPPATPALRTHNTRHKAKGAPKSTSDTQDDSSVGTPRGSAKNSDVEAGSMSAGSTTPQPGSGGSSGRVAYRQAIQNRLLPALRAFNPDLILISAGFDAARGDVGNARHERGGRERMGLDLESEDYAWTTRKILEIADICCHGRVVSVLEGGYG 1091
BLAST of mRNA_M-pyrifera_M_contig12645.5326.1 vs. uniprot
Match: A0A7S1GN08_CYCTE (Hypothetical protein n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GN08_CYCTE) HSP 1 Score: 147 bits (371), Expect = 5.650e-41 Identity = 87/197 (44.16%), Postives = 111/197 (56.35%), Query Frame = 1
Query: 1 YEFFPGSGAHDDIQSNIINAPLTPLW---------------------KVKESASNSARHSQGGGGGHGTRSRTSSLKAKQEPSERDMGSGAAPPTSSSSLLSAAGRT--GRVCYREAVQRRLLPALRAFNPKLILLSAGFDAAKGDVGNCKQGRRGASG-GLDLTSEDYLWTTEKIQSVADICCAGKMVSVLEGGYG 519
Y F+PG+G DD+ +NIIN P+TPLW K K+ A+ S+ S G + S ++ + + +A TS ++ + T GR YR A+Q RLLPALRAFNP LIL+SAGFDAA+GDVGN + G GLDL EDY WTT KI +ADICC G++VSVLEGGYG
Sbjct: 18 YSFYPGTGDEDDVANNIINVPITPLWREFHGSSSPVPSTMNTHNTRHKAKQKAAASSAASTPREGANEDMSDYGGVERSSDTESETASTKSAAATSRRNISPSPKNTNMGRQAYRRAIQNRLLPALRAFNPDLILISAGFDAARGDVGNARHYAGGKERMGLDLEPEDYAWTTRKILEIADICCQGRVVSVLEGGYG 214
BLAST of mRNA_M-pyrifera_M_contig12645.5326.1 vs. uniprot
Match: A0A448YY97_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YY97_9STRA) HSP 1 Score: 152 bits (383), Expect = 2.080e-39 Identity = 94/188 (50.00%), Postives = 111/188 (59.04%), Query Frame = 1
Query: 1 YEFFPGSGAHDDIQSNIINAPLTPLWKVKESASNSARHSQGGGGGHGTRSRTSSLKAKQ--EPSERDMG-------------SGAAPPTSSSSLLSAAGRTGRVCYREAVQRRLLPALRAFNPKLILLSAGFDAAKGDVGNCKQGRRGASGGLDLTSEDYLWTTEKIQSVADICCAGKMVSVLEGGYG 519
Y+F+PG+G DD+ NIIN P+TPLWK GG H TR RT ++A Q + S + G S A+ PTS SS S GR YR+A+Q RLL ALRAFNP LIL+SAGFDA KGDVGN K G+DL EDY WTT KI +ADICC G++VSVLEGGYG
Sbjct: 1020 YKFYPGTGDEDDLPLNIINVPITPLWKEGNQFQI--------GGTHNTRHRTR-IRANQSDDGSSSETGTPKVSDAEVDIKMSRASSPTSFSSSGSGGGRQA---YRKAIQNRLLXALRAFNPDLILISAGFDACKGDVGNAKHLGGKEKMGIDLEPEDYAWTTRKILEIADICCKGRVVSVLEGGYG 1195
BLAST of mRNA_M-pyrifera_M_contig12645.5326.1 vs. uniprot
Match: A0A7S4AC53_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AC53_9STRA) HSP 1 Score: 150 bits (379), Expect = 7.180e-39 Identity = 93/193 (48.19%), Postives = 113/193 (58.55%), Query Frame = 1
Query: 1 YEFFPGSGAHDDIQSNIINAPLTPLWKVKESASNSARHSQGGGGGHGTRSRTSSLKAKQEPSERDMGSG-------------------AAPPTSSSSLLSAAGRTGRVCYREAVQRRLLPALRAFNPKLILLSAGFDAAKGDVGNCKQGRRGASG-GLDLTSEDYLWTTEKIQSVADICCAGKMVSVLEGGYG 519
Y+F+PG+G DD+ NIIN P+TPLWK GG H TR +T ++ S+ D GS A+ PT+S S S AG GR YR+++Q RLLPALRAFNP LIL+SAGFDA KGDVGN K G G+DL EDY WTT K+ +ADICC G++VSVLEGGYG
Sbjct: 1006 YKFYPGTGDEDDLPLNIINVPITPLWKDSNQIPV--------GGTHNTRRQT-----RKRASQSDDGSSSETGTSRLSDAEVDPKLPRASSPTTSGS--SGAGG-GRQAYRKSIQSRLLPALRAFNPDLILISAGFDACKGDVGNAKHEIGGKEKMGIDLEPEDYAWTTSKVLEIADICCQGRVVSVLEGGYG 1182 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12645.5326.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12645.5326.1 >prot_M-pyrifera_M_contig12645.5326.1 ID=prot_M-pyrifera_M_contig12645.5326.1|Name=mRNA_M-pyrifera_M_contig12645.5326.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=173bp YEFFPGSGAHDDIQSNIINAPLTPLWKVKESASNSARHSQGGGGGHGTRSback to top mRNA from alignment at M-pyrifera_M_contig12645:7303..9076- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12645.5326.1 ID=mRNA_M-pyrifera_M_contig12645.5326.1|Name=mRNA_M-pyrifera_M_contig12645.5326.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1774bp|location=Sequence derived from alignment at M-pyrifera_M_contig12645:7303..9076- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12645:7303..9076- >mRNA_M-pyrifera_M_contig12645.5326.1 ID=mRNA_M-pyrifera_M_contig12645.5326.1|Name=mRNA_M-pyrifera_M_contig12645.5326.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1038bp|location=Sequence derived from alignment at M-pyrifera_M_contig12645:7303..9076- (Macrocystis pyrifera P11B4 male)back to top |