mRNA_M-pyrifera_M_contig126390.5320.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig126390.5320.1 vs. uniprot
Match: A0A3C1KLR0_9GAMM (Flagellar hook protein FlgE n=8 Tax=Halieaceae TaxID=1706372 RepID=A0A3C1KLR0_9GAMM) HSP 1 Score: 333 bits (853), Expect = 9.740e-112 Identity = 165/169 (97.63%), Postives = 168/169 (99.41%), Query Frame = 1
Query: 1 DLTSNLDSREVPPTVPFGGPFDAFALPPTAPDPSSFNATTSTTVYDGLGNPHVLSLYFVKTATPNEWEVHSLVDGVTTSGPDTLTFQSNGQFDPLTLPVEVNITGWQPLNAAGVGTGADPQDITVSLSDTTQFGTPFAVSSVVQDGFSAGQLRGLEIDSSGLAFARFTN 507
DLTSNLDSREVPPTVPFGGPFDAFA PPTAPDPSSFNATTSTTVYDGLGNPHVLSLYFVKTATPNEWEVHSLVDGVTTSGPDTLTFQSNGQFDPLTLPVEV+ITGWQPLNAAGVGTGADPQDITVSLSDTTQFGTPFAVSSVVQDGFSAGQLRGLEIDS+G+AFARFTN
Sbjct: 156 DLTSNLDSREVPPTVPFGGPFDAFAAPPTAPDPSSFNATTSTTVYDGLGNPHVLSLYFVKTATPNEWEVHSLVDGVTTSGPDTLTFQSNGQFDPLTLPVEVSITGWQPLNAAGVGTGADPQDITVSLSDTTQFGTPFAVSSVVQDGFSAGQLRGLEIDSTGIAFARFTN 324
BLAST of mRNA_M-pyrifera_M_contig126390.5320.1 vs. uniprot
Match: A0A3C7W470_9GAMM (Flagellar hook protein FlgE n=1 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A3C7W470_9GAMM) HSP 1 Score: 296 bits (757), Expect = 3.350e-97 Identity = 144/169 (85.21%), Postives = 155/169 (91.72%), Query Frame = 1
Query: 1 DLTSNLDSREVPPTVPFGGPFDAFALPPTAPDPSSFNATTSTTVYDGLGNPHVLSLYFVKTATPNEWEVHSLVDGVTTSGPDTLTFQSNGQFDPLTLPVEVNITGWQPLNAAGVGTGADPQDITVSLSDTTQFGTPFAVSSVVQDGFSAGQLRGLEIDSSGLAFARFTN 507
DLTSNLDSRE+ PTVPFGGPFDAFA PPTAPDPS++NATTSTT+YDGLGNPHVLSLYFVKTAT NEWEVHSL+DGVTTSGPDTLTFQSNGQFDP +LP+EVNITGW PLN AG TGA QD+ V+LSDTTQFGTPFAVSSV QDGF AGQLRGLEID SG+AFAR+TN
Sbjct: 156 DLTSNLDSREIQPTVPFGGPFDAFASPPTAPDPSAYNATTSTTIYDGLGNPHVLSLYFVKTATANEWEVHSLIDGVTTSGPDTLTFQSNGQFDPASLPIEVNITGWTPLNDAGAPTGAAAQDLVVNLSDTTQFGTPFAVSSVSQDGFGAGQLRGLEIDESGVAFARYTN 324
BLAST of mRNA_M-pyrifera_M_contig126390.5320.1 vs. uniprot
Match: A0A2D8ITR3_9GAMM (Flagellar hook protein FlgE n=1 Tax=Haliea sp. TaxID=1932666 RepID=A0A2D8ITR3_9GAMM) HSP 1 Score: 285 bits (730), Expect = 4.060e-93 Identity = 137/169 (81.07%), Postives = 151/169 (89.35%), Query Frame = 1
Query: 1 DLTSNLDSREVPPTVPFGGPFDAFALPPTAPDPSSFNATTSTTVYDGLGNPHVLSLYFVKTATPNEWEVHSLVDGVTTSGPDTLTFQSNGQFDPLTLPVEVNITGWQPLNAAGVGTGADPQDITVSLSDTTQFGTPFAVSSVVQDGFSAGQLRGLEIDSSGLAFARFTN 507
DL++NLDSRE P+ PFGGPFDAFA PPTAPDP+S+NATTSTTVYDGLGN HVLSLY+VKTA PNEWEVHS++DGVTTSGPDTLTFQSNGQFDP +LPV++NITGWQPLNAAG TGA QDIT+SLSDTTQFG FAV S+VQDGF GQLRGLEID SG+ FARFTN
Sbjct: 156 DLSANLDSREAQPSTPFGGPFDAFASPPTAPDPASYNATTSTTVYDGLGNAHVLSLYYVKTANPNEWEVHSMIDGVTTSGPDTLTFQSNGQFDPASLPVDINITGWQPLNAAGASTGAAAQDITLSLSDTTQFGVAFAVDSIVQDGFGPGQLRGLEIDESGVVFARFTN 324
BLAST of mRNA_M-pyrifera_M_contig126390.5320.1 vs. uniprot
Match: A0A7V0ZKG8_9GAMM (Flagellar hook protein FlgE n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A7V0ZKG8_9GAMM) HSP 1 Score: 268 bits (686), Expect = 1.790e-86 Identity = 126/169 (74.56%), Postives = 144/169 (85.21%), Query Frame = 1
Query: 1 DLTSNLDSREVPPTVPFGGPFDAFALPPTAPDPSSFNATTSTTVYDGLGNPHVLSLYFVKTATPNEWEVHSLVDGVTTSGPDTLTFQSNGQFDPLTLPVEVNITGWQPLNAAGVGTGADPQDITVSLSDTTQFGTPFAVSSVVQDGFSAGQLRGLEIDSSGLAFARFTN 507
DLT+NLDSRE+ P VPFGGPFDAFA+PPT PDP SFNATT+ T+YDGLGN H +S YFVKTA NEWEVHSLVDGVTTSGPDTLTFQSNG+FDP TLPV+++I GW PLN G+ TGADPQD+T+S+S TQFG FAVSS VQDGF+ GQL GLEID +G+ FAR+TN
Sbjct: 156 DLTANLDSREIAPAVPFGGPFDAFAMPPTVPDPDSFNATTTVTIYDGLGNAHAMSTYFVKTANANEWEVHSLVDGVTTSGPDTLTFQSNGKFDPTTLPVDISINGWNPLNENGLPTGADPQDLTISMSQFTQFGAEFAVSSAVQDGFTTGQLHGLEIDDTGVVFARYTN 324
BLAST of mRNA_M-pyrifera_M_contig126390.5320.1 vs. uniprot
Match: A0A2N5X1Q5_9GAMM (Flagellar hook protein FlgE n=1 Tax=Pseudohalioglobus lutimaris TaxID=1737061 RepID=A0A2N5X1Q5_9GAMM) HSP 1 Score: 268 bits (684), Expect = 3.600e-86 Identity = 129/168 (76.79%), Postives = 143/168 (85.12%), Query Frame = 1
Query: 4 LTSNLDSREVPPTVPFGGPFDAFALPPTAPDPSSFNATTSTTVYDGLGNPHVLSLYFVKTATPNEWEVHSLVDGVTTSGPDTLTFQSNGQFDPLTLPVEVNITGWQPLNAAGVGTGADPQDITVSLSDTTQFGTPFAVSSVVQDGFSAGQLRGLEIDSSGLAFARFTN 507
LT+NLDSR VPPTVPFGGP DAFA+PP PDP SFNAT+S T+YDGLGN HV+SLYFVKTA PNEWEVHS VDGVTTSGPDTL FQSNGQFDPLTLP+++ +TGW PLN AG+ TGAD QD TVSLSD +QFG FAVSS QDGF+ GQL GLEID SG+ FAR+TN
Sbjct: 157 LTANLDSRSVPPTVPFGGPHDAFAVPPVVPDPDSFNATSSVTIYDGLGNSHVMSLYFVKTANPNEWEVHSSVDGVTTSGPDTLNFQSNGQFDPLTLPIDLAVTGWTPLNEAGIPTGADIQDFTVSLSDLSQFGAEFAVSSSTQDGFTTGQLYGLEIDDSGVVFARYTN 324
BLAST of mRNA_M-pyrifera_M_contig126390.5320.1 vs. uniprot
Match: A0A2E2W4J3_9GAMM (Flagellar hook protein FlgE n=3 Tax=Porticoccus sp. TaxID=2024853 RepID=A0A2E2W4J3_9GAMM) HSP 1 Score: 267 bits (682), Expect = 7.210e-86 Identity = 129/169 (76.33%), Postives = 148/169 (87.57%), Query Frame = 1
Query: 1 DLTSNLDSREVPPTVPFGGPFDAFALPPTAPDPSSFNATTSTTVYDGLGNPHVLSLYFVKTATPNEWEVHSLVDGVTTSGPDTLTFQSNGQFDPLTLPVEVNITGWQPLNAAGVGTGADPQDITVSLSDTTQFGTPFAVSSVVQDGFSAGQLRGLEIDSSGLAFARFTN 507
D+T NLDSRE P VPFGGPFDAFA+PPT+PD +SFNAT+STT+YD LGNPHVLS +FVKT+T N+WEVH+LVDGVTTSGPDTLTFQSNGQFDP TLPVEVNI GW PLN+AG TGA Q TVSLS TQFG+ FAVS++VQDGF+ GQLRGLEID++G+AFAR+TN
Sbjct: 156 DITLNLDSRETAPLVPFGGPFDAFAVPPTSPDSNSFNATSSTTIYDELGNPHVLSTFFVKTSTANQWEVHTLVDGVTTSGPDTLTFQSNGQFDPATLPVEVNIAGWTPLNSAGAPTGASAQSFTVSLSKGTQFGSDFAVSTIVQDGFTTGQLRGLEIDNTGVAFARYTN 324
BLAST of mRNA_M-pyrifera_M_contig126390.5320.1 vs. uniprot
Match: A0A2A5GGP4_9GAMM (Flagellar hook protein FlgE n=1 Tax=Porticoccaceae bacterium TaxID=2026782 RepID=A0A2A5GGP4_9GAMM) HSP 1 Score: 259 bits (663), Expect = 5.300e-83 Identity = 124/169 (73.37%), Postives = 143/169 (84.62%), Query Frame = 1
Query: 1 DLTSNLDSREVPPTVPFGGPFDAFALPPTAPDPSSFNATTSTTVYDGLGNPHVLSLYFVKTATPNEWEVHSLVDGVTTSGPDTLTFQSNGQFDPLTLPVEVNITGWQPLNAAGVGTGADPQDITVSLSDTTQFGTPFAVSSVVQDGFSAGQLRGLEIDSSGLAFARFTN 507
D+TSNLDSRE PP VPFGGPFDAFA PTAPD S+N+TTSTTVYD LGNPH LS+YFVKT T NEWE H+L+DGVTTSGPDTLTFQSNGQFDP TLP EVNI GW PLN AG+ +GA Q +++LS +TQFG+ FAVS++ QDGF+ GQLRGLEID +G+AFAR+TN
Sbjct: 156 DITSNLDSRETPPLVPFGGPFDAFAAVPTAPDSDSYNSTTSTTVYDELGNPHXLSMYFVKTXTANEWETHTLIDGVTTSGPDTLTFQSNGQFDPTTLPXEVNIAGWAPLNEAGLPSGASAQSFSIALSRSTQFGSEFAVSTITQDGFTTGQLRGLEIDDTGVAFARYTN 324
BLAST of mRNA_M-pyrifera_M_contig126390.5320.1 vs. uniprot
Match: A0A2E0Z421_9GAMM (Flagellar hook protein FlgE n=1 Tax=Halioglobus sp. TaxID=2024834 RepID=A0A2E0Z421_9GAMM) HSP 1 Score: 259 bits (661), Expect = 1.060e-82 Identity = 121/168 (72.02%), Postives = 143/168 (85.12%), Query Frame = 1
Query: 4 LTSNLDSREVPPTVPFGGPFDAFALPPTAPDPSSFNATTSTTVYDGLGNPHVLSLYFVKTATPNEWEVHSLVDGVTTSGPDTLTFQSNGQFDPLTLPVEVNITGWQPLNAAGVGTGADPQDITVSLSDTTQFGTPFAVSSVVQDGFSAGQLRGLEIDSSGLAFARFTN 507
+ +NLDSRE PP +PFGGPFDAFA PPT PDP S+NATTS TVYD LGN H++S+YFVKT T NEWEVHS +DGVTTSGPDT+TFQSNG+FDP TLP+E++I+GW PLNA G TGA+ QDITVSLS TQFG+ F+VSSVVQDGF+ GQL GL+ID +G+ FAR+TN
Sbjct: 157 IIANLDSRETPPAIPFGGPFDAFATPPTVPDPDSYNATTSATVYDSLGNAHIMSMYFVKTGTANEWEVHSTIDGVTTSGPDTITFQSNGKFDPGTLPIELSISGWNPLNADGTATGANAQDITVSLSQFTQFGSDFSVSSVVQDGFTTGQLLGLDIDDTGMVFARYTN 324
BLAST of mRNA_M-pyrifera_M_contig126390.5320.1 vs. uniprot
Match: A0A7Y1ZE85_9GAMM (Flagellar hook protein FlgE n=1 Tax=Halioglobus sp. TaxID=2024834 RepID=A0A7Y1ZE85_9GAMM) HSP 1 Score: 252 bits (644), Expect = 3.870e-80 Identity = 118/168 (70.24%), Postives = 142/168 (84.52%), Query Frame = 1
Query: 4 LTSNLDSREVPPTVPFGGPFDAFALPPTAPDPSSFNATTSTTVYDGLGNPHVLSLYFVKTATPNEWEVHSLVDGVTTSGPDTLTFQSNGQFDPLTLPVEVNITGWQPLNAAGVGTGADPQDITVSLSDTTQFGTPFAVSSVVQDGFSAGQLRGLEIDSSGLAFARFTN 507
L +NLDSRE+ P +PFGGPFDAFA+PPT PD S+NATTS TV+D LGN H++SLYFVK+ATPNEW+VH+ +DGVTTSGPDT+TFQSNGQFDP TLP+E+NITGW PLN G +GAD QD T+SLS TQFG+ F+VSSV QDGF+ GQL GL+ID +G+ FAR+TN
Sbjct: 157 LVANLDSREIEPPIPFGGPFDAFAVPPTVPDADSYNATTSATVFDTLGNAHIMSLYFVKSATPNEWDVHTTIDGVTTSGPDTITFQSNGQFDPGTLPIELNITGWNPLNENGGASGADVQDFTISLSQFTQFGSDFSVSSVQQDGFTTGQLLGLDIDDTGMVFARYTN 324
BLAST of mRNA_M-pyrifera_M_contig126390.5320.1 vs. uniprot
Match: A0A2A4LZA2_9GAMM (Flagellar hook protein FlgE n=1 Tax=Cellvibrionales bacterium TaxID=2026722 RepID=A0A2A4LZA2_9GAMM) HSP 1 Score: 217 bits (553), Expect = 1.860e-66 Identity = 100/169 (59.17%), Postives = 132/169 (78.11%), Query Frame = 1
Query: 1 DLTSNLDSREVPPTVPFGGPFDAFALPPTAPDPSSFNATTSTTVYDGLGNPHVLSLYFVKTATPNEWEVHSLVDGVTTSGPDTLTFQSNGQFDPLTLPVEVNITGWQPLNAAGVGTGADPQDITVSLSDTTQFGTPFAVSSVVQDGFSAGQLRGLEIDSSGLAFARFTN 507
D+T NLDS E+PP V +GGPFDAFA+PPT P P +N++TS T+YDGLG PH+LS YF K+AT +W+VH+L+DG+T SGPD +TF S+GQFD +LPVEV+IT W PL++ G TGA QD T+ LS +TQ+G+ FAV S+ QDGF+ GQL GL+I +G+ FA++TN
Sbjct: 156 DMTLNLDSTEIPPAVAWGGPFDAFAVPPTTPSPDMYNSSTSLTIYDGLGIPHLLSTYFAKSATAGQWDVHTLIDGLTVSGPDVITFNSSGQFDTASLPVEVSITAWNPLDSTGAATGAAAQDFTLDLSPSTQYGSDFAVLSLDQDGFATGQLGGLDIADNGIVFAQYTN 324 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126390.5320.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig126390.5320.1 >prot_M-pyrifera_M_contig126390.5320.1 ID=prot_M-pyrifera_M_contig126390.5320.1|Name=mRNA_M-pyrifera_M_contig126390.5320.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=169bp DLTSNLDSREVPPTVPFGGPFDAFALPPTAPDPSSFNATTSTTVYDGLGNback to top mRNA from alignment at M-pyrifera_M_contig126390:3..509+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig126390.5320.1 ID=mRNA_M-pyrifera_M_contig126390.5320.1|Name=mRNA_M-pyrifera_M_contig126390.5320.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=507bp|location=Sequence derived from alignment at M-pyrifera_M_contig126390:3..509+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig126390:3..509+ >mRNA_M-pyrifera_M_contig126390.5320.1 ID=mRNA_M-pyrifera_M_contig126390.5320.1|Name=mRNA_M-pyrifera_M_contig126390.5320.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1014bp|location=Sequence derived from alignment at M-pyrifera_M_contig126390:3..509+ (Macrocystis pyrifera P11B4 male)back to top |