mRNA_M-pyrifera_M_contig12639.5319.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12639.5319.1 vs. uniprot
Match: A0A6H5L664_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L664_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 4.120e-16 Identity = 70/213 (32.86%), Postives = 90/213 (42.25%), Query Frame = 1
Query: 22 QKVSYDMLDRFGRTTLHWAAEQGHQNVVLALLRAGASVDSVSARKATLMMLAAYRRHVKIVLLLDYRV-GKTDYGSVNGHLRGTGDSRVTALHFAGAGGHMEVAEILLDMGFDKGQRKWVGLTPAK------------------------------------DVGMVSGLVNGGAFIDWQDV-AGATPLHRAAHFRHNTTSRVLLQAGADPNL 546
++ + D DRFG+T LHWAA QGH + VLAL+ AGA V G + + G + R TALH+A GGH+ V LL GF GQ G+T A+ DV V GL GGAF+DWQD +PLHRA +F H ++LL AGA+PN+
Sbjct: 79 RRTACDAKDRFGKTPLHWAAGQGHVDTVLALVNAGALVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPNRYNCQGRCHA--ELRSTALHYAAEGGHVGVIIALLSAGFCNGQPDETGVTAAEISARVGHESSREATRRLLGGDRGGKLVYDYVNMVSQDVATVCGLAQGGAFLDWQDNHRRRSPLHRAVYFGHFQILKILLAAGANPNV 289
BLAST of mRNA_M-pyrifera_M_contig12639.5319.1 vs. uniprot
Match: D7G7M3_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7M3_ECTSI) HSP 1 Score: 75.9 bits (185), Expect = 1.270e-11 Identity = 65/212 (30.66%), Postives = 90/212 (42.45%), Query Frame = 1
Query: 25 KVSYDMLDRFGRTTLHWAAEQGHQNVVLALLRAGASVDSVSARKATLMMLAAYRRHVKIVLLLDYRVG------KTDYGSVNGHLRGTG---------------------------DSRVTALHFAGAGGHMEVAEILLDM-GFDKGQR---KWVGLTPAKDVGMVSGLVNGGAFIDWQDV-AGATPLHRAAHFRHNTTSRVLLQAGADPNL 546
+++ D DRFG+T LHWAA QGH ++VL L+ AGA V + G + LR T ++RVTA + GH E + G D+G + +V + ++DV V GLV GGAF+DWQD TPLHRA +F H ++LL AGA+PN+
Sbjct: 81 RIACDAKDRFGKTPLHWAAGQGHVDIVLVLMDAGALVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPNRHNCEEGRCHAELRSTXXXXXXXXXXXXXXXXXXXAGFCKGQHDETRVTAAEISARVGHESSREATRRLLGGDRGGKLVYDYVNMV-SQDVATVYGLVQGGAFLDWQDSHRRRTPLHRAVYFGHFQILKILLAAGANPNV 291
BLAST of mRNA_M-pyrifera_M_contig12639.5319.1 vs. uniprot
Match: A0A6H5L5T2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5T2_9PHAE) HSP 1 Score: 69.3 bits (168), Expect = 1.970e-9 Identity = 66/215 (30.70%), Postives = 89/215 (41.40%), Query Frame = 1
Query: 22 QKVSYDMLDRFGRTTLHWAAEQGHQNVVLALLRAGASVDSVSARKATLMMLAAY-------------------------RRHVKI----------VLLLDYRVGKTDYGSVNGHLRGTGDSRVTALHFAGAGGHMEVAEILLDM-GFDKGQR---KWVGLTPAKDVGMVSGLVNGGAFIDWQDV-AGATPLHRAAHFRHNTTSRVLLQAGADPNL 546
++ + D DRFG+T LHWAA QGH + VLAL+ AGA V R H ++ G NG TG VTA + GH E + G D+G + +V + ++DV V GL GGAF+DWQD +PLHRA +F H ++LL AGA+PN+
Sbjct: 72 RRTACDAKDRFGKTPLHWAAGQGHVDTVLALVDAGALVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPNRYNCQGRCHAELRSTALXXXXXXXXXXXXXXXXSAGFCNGQPDETG---VTAAEISARVGHESSREATRRLLGGDRGGKLVYDYVNMV-SQDVATVCGLAQGGAFLDWQDNHRRRSPLHRAVYFGHFQILKILLAAGANPNV 282
BLAST of mRNA_M-pyrifera_M_contig12639.5319.1 vs. uniprot
Match: A0A6H5IX70_9HYME (Uncharacterized protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5IX70_9HYME) HSP 1 Score: 61.2 bits (147), Expect = 1.020e-6 Identity = 55/188 (29.26%), Postives = 86/188 (45.74%), Query Frame = 1
Query: 22 QKVSYDMLDRFGRTTLHWAAEQGHQNVVLALLRAGASVDSVSARKATLMMLAAYRRHVKIVLLLDYRVGKTDYGSVNGHLRGTGDSRVTALHFAGAGGHMEVAEILLDMGFDKGQRKWVGLTPAKDVGM------VSGL-------VNGGAFIDWQDVAGATPLHRAAHFRHNTTSRVLLQAGADPNL 546
Q V D+ D+FGRT LH A E G + + LLR GA + V + T + A R + + +++ +V R D ++ LH A GH ++ E+LL G D G T + + ++G+ + +D++D G TPLH A H+ + +LL+ GADPNL
Sbjct: 334 QAVQIDIQDKFGRTPLHLALENGLRKLTELLLRRGADPNLVDEQVFTALHHIALRDIDDDLAEMFFQICDDIQQTVKLDFRDK-DGQIP-LHLALMNGHSKLTELLLRRGADPKLADEQGFTALHHIALREIDDDLAGMFFQICDDIQQTVILDFRDEDGQTPLHLALVKDHSKLTELLLRRGADPNL 519
BLAST of mRNA_M-pyrifera_M_contig12639.5319.1 vs. uniprot
Match: A0A6H5IM40_9HYME (Uncharacterized protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5IM40_9HYME) HSP 1 Score: 61.2 bits (147), Expect = 1.120e-6 Identity = 54/190 (28.42%), Postives = 82/190 (43.16%), Query Frame = 1
Query: 22 QKVSYDMLDRFGRTTLHWAAEQGHQNVVLALLRAGASVDSVSARKATLMMLAAYRRHVKIVLLLD-YRVGKTDYGSVNGHLRGTGDSRVTALHFAGAGGHMEVAEILLDMGFDKGQRKWVGLTP--------------AKDVGMVSGLVNGGAFIDWQDVAGATPLHRAAHFRHNTTSRVLLQAGADPNL 546
Q V ++ D+FGRT LH A E GH+N+V LL A + + +T + + ++ I L + + Y SV L T LH A GH + +LL+ D + G TP A+ + +S + ++ +D G TPLH A H + LL+ GADPN+
Sbjct: 910 QSVQLNVRDKFGRTPLHLALENGHENLVRLLLENDADPNEANDEGSTPLHIICQNKYNYINLAETLFEISSDKYQSVQ--LNARDKFGRTPLHLALENGHENLVRLLLENDADPNEANDEGSTPLHIICQNKCNYINLAETLFEISSDKHQSVQLNVRDKFGRTPLHLALKNGHKELVQWLLRNGADPNV 1097
BLAST of mRNA_M-pyrifera_M_contig12639.5319.1 vs. uniprot
Match: A0A453PUW1_AEGTS (Uncharacterized protein n=2 Tax=Triticinae TaxID=1648030 RepID=A0A453PUW1_AEGTS) HSP 1 Score: 54.7 bits (130), Expect = 6.260e-5 Identity = 50/166 (30.12%), Postives = 76/166 (45.78%), Query Frame = 1
Query: 67 LHWAAEQGHQNVVLALLRAGASVDSVSARKATLMMLAAYRRHVKIV---LLLDYRVGKTDYGSVNGHLRGTGDSRVTALHFAGAGGHMEVAEILLDMGFDKGQRKWVGLTPAKDVGMVS-------GLVNGGAFIDWQDVAGATPLHRAAHFRHNTTSRVLLQAGA 534
LH+AA QGH +V LL +G ++ + R T +M A H ++V +L + + +TDY +NG TA+HFA GH ++L + ++ T + VS GLV ++W+ G TPLH AA H ++LL GA
Sbjct: 55 LHYAAAQGHHEIVSLLLESGVEINLRNYRGQTALMQACQYGHWEVVQTLMLFNANIHRTDY--LNGG---------TAIHFAALHGHARCLRLVL-ADYVPSIPNFLNQTNHRSTEEVSDADFDDDGLVK---MVNWKADGGLTPLHMAALNGHVECVQLLLDLGA 205
BLAST of mRNA_M-pyrifera_M_contig12639.5319.1 vs. uniprot
Match: A0A453PUZ2_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453PUZ2_AEGTS) HSP 1 Score: 54.7 bits (130), Expect = 6.680e-5 Identity = 50/166 (30.12%), Postives = 76/166 (45.78%), Query Frame = 1
Query: 67 LHWAAEQGHQNVVLALLRAGASVDSVSARKATLMMLAAYRRHVKIV---LLLDYRVGKTDYGSVNGHLRGTGDSRVTALHFAGAGGHMEVAEILLDMGFDKGQRKWVGLTPAKDVGMVS-------GLVNGGAFIDWQDVAGATPLHRAAHFRHNTTSRVLLQAGA 534
LH+AA QGH +V LL +G ++ + R T +M A H ++V +L + + +TDY +NG TA+HFA GH ++L + ++ T + VS GLV ++W+ G TPLH AA H ++LL GA
Sbjct: 55 LHYAAAQGHHEIVSLLLESGVEINLRNYRGQTALMQACQYGHWEVVQTLMLFNANIHRTDY--LNGG---------TAIHFAALHGHARCLRLVL-ADYVPSIPNFLNQTNHRSTEEVSDADFDDDGLVK---MVNWKADGGLTPLHMAALNGHVECVQLLLDLGA 205
BLAST of mRNA_M-pyrifera_M_contig12639.5319.1 vs. uniprot
Match: A0A453PUW7_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453PUW7_AEGTS) HSP 1 Score: 54.7 bits (130), Expect = 7.310e-5 Identity = 50/166 (30.12%), Postives = 76/166 (45.78%), Query Frame = 1
Query: 67 LHWAAEQGHQNVVLALLRAGASVDSVSARKATLMMLAAYRRHVKIV---LLLDYRVGKTDYGSVNGHLRGTGDSRVTALHFAGAGGHMEVAEILLDMGFDKGQRKWVGLTPAKDVGMVS-------GLVNGGAFIDWQDVAGATPLHRAAHFRHNTTSRVLLQAGA 534
LH+AA QGH +V LL +G ++ + R T +M A H ++V +L + + +TDY +NG TA+HFA GH ++L + ++ T + VS GLV ++W+ G TPLH AA H ++LL GA
Sbjct: 34 LHYAAAQGHHEIVSLLLESGVEINLRNYRGQTALMQACQYGHWEVVQTLMLFNANIHRTDY--LNGG---------TAIHFAALHGHARCLRLVL-ADYVPSIPNFLNQTNHRSTEEVSDADFDDDGLVK---MVNWKADGGLTPLHMAALNGHVECVQLLLDLGA 184
BLAST of mRNA_M-pyrifera_M_contig12639.5319.1 vs. uniprot
Match: A0A3B6QMS3_WHEAT (Uncharacterized protein n=9 Tax=Triticinae TaxID=1648030 RepID=A0A3B6QMS3_WHEAT) HSP 1 Score: 54.7 bits (130), Expect = 7.400e-5 Identity = 50/166 (30.12%), Postives = 76/166 (45.78%), Query Frame = 1
Query: 67 LHWAAEQGHQNVVLALLRAGASVDSVSARKATLMMLAAYRRHVKIV---LLLDYRVGKTDYGSVNGHLRGTGDSRVTALHFAGAGGHMEVAEILLDMGFDKGQRKWVGLTPAKDVGMVS-------GLVNGGAFIDWQDVAGATPLHRAAHFRHNTTSRVLLQAGA 534
LH+AA QGH +V LL +G ++ + R T +M A H ++V +L + + +TDY +NG TA+HFA GH ++L + ++ T + VS GLV ++W+ G TPLH AA H ++LL GA
Sbjct: 55 LHYAAAQGHHEIVSLLLESGVEINLRNYRGQTALMQACQYGHWEVVQTLMLFNANIHRTDY--LNGG---------TAIHFAALHGHARCLRLVL-ADYVPSIPNFLNQTNHRSTEEVSDADFDDDGLVK---MVNWKADGGLTPLHMAALNGHVECVQLLLDLGA 205 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12639.5319.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12639.5319.1 >prot_M-pyrifera_M_contig12639.5319.1 ID=prot_M-pyrifera_M_contig12639.5319.1|Name=mRNA_M-pyrifera_M_contig12639.5319.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=310bp CPRVARRQKVSYDMLDRFGRTTLHWAAEQGHQNVVLALLRAGASVDSVSAback to top mRNA from alignment at M-pyrifera_M_contig12639:4374..5412- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12639.5319.1 ID=mRNA_M-pyrifera_M_contig12639.5319.1|Name=mRNA_M-pyrifera_M_contig12639.5319.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1039bp|location=Sequence derived from alignment at M-pyrifera_M_contig12639:4374..5412- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12639:4374..5412- >mRNA_M-pyrifera_M_contig12639.5319.1 ID=mRNA_M-pyrifera_M_contig12639.5319.1|Name=mRNA_M-pyrifera_M_contig12639.5319.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1860bp|location=Sequence derived from alignment at M-pyrifera_M_contig12639:4374..5412- (Macrocystis pyrifera P11B4 male)back to top |