mRNA_M-pyrifera_M_contig126374.5316.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig126374.5316.1 vs. uniprot
Match: A0A5A8DCF2_CAFRO (Uncharacterized protein n=3 Tax=Sar TaxID=2698737 RepID=A0A5A8DCF2_CAFRO) HSP 1 Score: 95.1 bits (235), Expect = 2.700e-22 Identity = 48/83 (57.83%), Postives = 59/83 (71.08%), Query Frame = 1
Query: 4 AASELYSR-LGFARSVAGTWSPDSLSFYSEQSLGGRELHPSMGQDVNQLAGDLLLDEHGRLLLAYYSRTNTDRPTVQQIADAL 249
AA +YS F RSVAG WS SL FY+EQ GREL S GQDVNQLAGD+++ GR+LLAYYS+ NTDRP+V ++ A+
Sbjct: 29 AAGTVYSESFRFRRSVAGVWSSASLGFYAEQKAAGRELESSHGQDVNQLAGDMVVGSDGRMLLAYYSKDNTDRPSVDELLAAV 111
BLAST of mRNA_M-pyrifera_M_contig126374.5316.1 vs. uniprot
Match: A0A5A8E9H0_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E9H0_CAFRO) HSP 1 Score: 95.1 bits (235), Expect = 4.560e-21 Identity = 48/83 (57.83%), Postives = 59/83 (71.08%), Query Frame = 1
Query: 4 AASELYSR-LGFARSVAGTWSPDSLSFYSEQSLGGRELHPSMGQDVNQLAGDLLLDEHGRLLLAYYSRTNTDRPTVQQIADAL 249
AA +YS F RSVAG WS SL FY+EQ GREL S GQDVNQLAGD+++ GR+LLAYYS+ NTDRP+V ++ A+
Sbjct: 284 AAGTVYSESFRFRRSVAGVWSSASLGFYAEQKAAGRELESSHGQDVNQLAGDMVVGSDGRMLLAYYSKDNTDRPSVDELLAAV 366
BLAST of mRNA_M-pyrifera_M_contig126374.5316.1 vs. uniprot
Match: A0A812MWE4_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812MWE4_SYMMI) HSP 1 Score: 92.0 bits (227), Expect = 5.660e-20 Identity = 42/77 (54.55%), Postives = 59/77 (76.62%), Query Frame = 1
Query: 16 LYSRL----GFARSVAGTWSPDSLSFYSEQSLGGRELHPSMGQDVNQLAGDLLLDEHGRLLLAYYSRTNTDRPTVQQ 234
LY R+ GF +S AG WSP+SL FYS+Q L GRELHPS GQD +++ GD+LLD G+++LA+YS++ DRP+V++
Sbjct: 230 LYVRVKQSWGFRKSYAGVWSPESLQFYSDQKLQGRELHPSNGQDPHRMGGDILLDGRGQVVLAHYSKSTRDRPSVEE 306
BLAST of mRNA_M-pyrifera_M_contig126374.5316.1 vs. uniprot
Match: A0A813D3K2_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813D3K2_9DINO) HSP 1 Score: 92.0 bits (227), Expect = 6.920e-20 Identity = 42/77 (54.55%), Postives = 59/77 (76.62%), Query Frame = 1
Query: 16 LYSRL----GFARSVAGTWSPDSLSFYSEQSLGGRELHPSMGQDVNQLAGDLLLDEHGRLLLAYYSRTNTDRPTVQQ 234
LY R+ GF +S AG WSP+SL FYS+Q L GRELHPS GQD +++ GD+LLD G+++LA+YS++ DRP+V++
Sbjct: 230 LYVRVKQSWGFRKSYAGVWSPESLQFYSDQKLQGRELHPSNGQDPHRMGGDILLDGRGQVVLAHYSKSTRDRPSVEE 306
BLAST of mRNA_M-pyrifera_M_contig126374.5316.1 vs. uniprot
Match: A0A1Q9CJV1_SYMMI (Uncharacterized protein n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9CJV1_SYMMI) HSP 1 Score: 92.0 bits (227), Expect = 6.920e-20 Identity = 42/77 (54.55%), Postives = 59/77 (76.62%), Query Frame = 1
Query: 16 LYSRL----GFARSVAGTWSPDSLSFYSEQSLGGRELHPSMGQDVNQLAGDLLLDEHGRLLLAYYSRTNTDRPTVQQ 234
LY R+ GF +S AG WSP+SL FYS+Q L GRELHPS GQD +++ GD+LLD G+++LA+YS++ DRP+V++
Sbjct: 230 LYVRVKQSWGFRKSYAGVWSPESLQFYSDQKLQGRELHPSNGQDPHRMGGDILLDGRGQVVLAHYSKSTRDRPSVEE 306
BLAST of mRNA_M-pyrifera_M_contig126374.5316.1 vs. uniprot
Match: A0A812ZUV3_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812ZUV3_9DINO) HSP 1 Score: 83.2 bits (204), Expect = 2.900e-18 Identity = 38/79 (48.10%), Postives = 53/79 (67.09%), Query Frame = 1
Query: 4 AASELYSRLGFARSVAGTWSPDSLSFYSEQSLGGRELHPSMGQDVNQLAGDLLLDEHGRLLLAYYSRTNTDRPTVQQIA 240
A ++ Y+ GF RS+AG W SL +Y++Q+ GREL S GQDV+QLAGD+++ G ++L YY NTDRP V +A
Sbjct: 49 APADAYAAFGFKRSLAGVWGAQSLGWYAQQAAAGRELQSSRGQDVHQLAGDVVVSAEGTVVLPYYGLDNTDRPGVTTLA 127
BLAST of mRNA_M-pyrifera_M_contig126374.5316.1 vs. uniprot
Match: A0A7C4Q3G6_9CHLR (Redoxin domain-containing protein n=1 Tax=Bellilinea caldifistulae TaxID=360411 RepID=A0A7C4Q3G6_9CHLR) HSP 1 Score: 68.9 bits (167), Expect = 4.940e-13 Identity = 33/74 (44.59%), Postives = 48/74 (64.86%), Query Frame = 1
Query: 1 DAASELYSRLGFARSVAGTWSPDSLSFYSEQSLGGRELHPSMGQDVNQLAGDLLLDEHGRLLLAYYSRTNTDRP 222
D LY G RS+ TW+ +L FY+++ L G +L + G D++QL GD +LD+HG+++LAYYS TDRP
Sbjct: 51 DPQKNLYQAFGLQRSIRRTWNLPTLWFYAQKLLRGEKLIAT-GGDLHQLGGDFILDQHGQIVLAYYSHDPTDRP 123
BLAST of mRNA_M-pyrifera_M_contig126374.5316.1 vs. uniprot
Match: A0A6P8J0V5_ACTTE (uncharacterized protein LOC116305662 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8J0V5_ACTTE) HSP 1 Score: 70.5 bits (171), Expect = 1.730e-12 Identity = 35/80 (43.75%), Postives = 50/80 (62.50%), Query Frame = 1
Query: 13 ELYSRLGFARSVAGTWSPDSLSFYSEQSLGGRELHPSMGQD-VNQLAGDLLLDEHGRLLLAYYSRTNTDRPTVQQIADAL 249
+LY LG RSVA TW +L +Y+EQ GR+L +D +Q+ GD ++D HG + L Y S+ +TDRPTV+ + AL
Sbjct: 240 KLYQALGLHRSVAKTWCTIALVYYAEQKRKGRKLFGLFEEDDPSQMGGDFIIDCHGNMKLVYQSKVSTDRPTVEDLVQAL 319
BLAST of mRNA_M-pyrifera_M_contig126374.5316.1 vs. uniprot
Match: A0A817NP41_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817NP41_9BILA) HSP 1 Score: 65.9 bits (159), Expect = 5.500e-11 Identity = 33/86 (38.37%), Postives = 52/86 (60.47%), Query Frame = 1
Query: 1 DAASELYSRLGF-ARSVAGTWSPDSLSFYSEQSLGGRELHPSMGQ--DVNQLAGDLLLDEHGRLLLAYYSRTNTDRPTVQQIADAL 249
D+ LY GF A++ A W+ +L +Y EQ L GR+L + + D NQ+ G+ ++D +GR++ Y S+T TDRP V+Q+ L
Sbjct: 160 DSDRRLYRHFGFPAKAYARVWNVQTLDYYVEQKLSGRQLPTKLDKNDDPNQMGGNAIIDRNGRVIWVYKSKTPTDRPNVKQLQSIL 245
BLAST of mRNA_M-pyrifera_M_contig126374.5316.1 vs. uniprot
Match: A0A818EMF4_9BILA (Hypothetical protein n=1 Tax=Rotaria socialis TaxID=392032 RepID=A0A818EMF4_9BILA) HSP 1 Score: 60.5 bits (145), Expect = 8.870e-10 Identity = 28/77 (36.36%), Postives = 51/77 (66.23%), Query Frame = 1
Query: 16 LYSRLGF-ARSVAGTWSPDSLSFYSEQSLGGRELHPSMGQ--DVNQLAGDLLLDEHGRLLLAYYSRTNTDRPTVQQI 237
LY GF ++ A W+ +L +Y EQ L G++L ++ + D NQ+ G++++D+ GR++ Y S++ TDRP+V+Q+
Sbjct: 49 LYHYFGFPGKAYARVWNVQTLDYYVEQKLNGKKLPTALDKNDDPNQMGGNVIIDQSGRVIWVYKSKSPTDRPSVRQL 125 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126374.5316.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig126374.5316.1 >prot_M-pyrifera_M_contig126374.5316.1 ID=prot_M-pyrifera_M_contig126374.5316.1|Name=mRNA_M-pyrifera_M_contig126374.5316.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=83bp DAASELYSRLGFARSVAGTWSPDSLSFYSEQSLGGRELHPSMGQDVNQLAback to top mRNA from alignment at M-pyrifera_M_contig126374:260..508- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig126374.5316.1 ID=mRNA_M-pyrifera_M_contig126374.5316.1|Name=mRNA_M-pyrifera_M_contig126374.5316.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=249bp|location=Sequence derived from alignment at M-pyrifera_M_contig126374:260..508- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig126374:260..508- >mRNA_M-pyrifera_M_contig126374.5316.1 ID=mRNA_M-pyrifera_M_contig126374.5316.1|Name=mRNA_M-pyrifera_M_contig126374.5316.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=498bp|location=Sequence derived from alignment at M-pyrifera_M_contig126374:260..508- (Macrocystis pyrifera P11B4 male)back to top |