mRNA_M-pyrifera_M_contig12636.5315.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12636.5315.1 vs. uniprot
Match: D8LGM2_ECTSI (20S proteasome alpha subunit G n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGM2_ECTSI) HSP 1 Score: 267 bits (683), Expect = 6.920e-82 Identity = 210/418 (50.24%), Postives = 240/418 (57.42%), Query Frame = 1
Query: 1 VLVTNKLVSADAAELLTDGGTRRIYKVDSHIGILPAGLPADGRALARKAMEYCRSHRREYGEPIPGRVLADRLGEFLHAACVRWGSRAYPNALFIACWGER--DRGIEKRGGDGGEGGARLSDWSPEPSEIVETAETMGEADVGAGEGGAXXXXXXXXXXXXXXXXXXGERMGGEEGKRMEEAVVGDRDSGFRLYVVDPNGASRRYRAACTGRGSARTRKWLHSSFATDGGSWSDADAEGRSGMKSAAMEKGEEXXXXXXXXDGDXXXXXXXXXXXXXXXVDEESRSRGSGEPGGQRRAGNGSNEQTAXXXXXXXXXXXXXXXXXXXXXXXX-----------QPPPLSQMTCEEAARAMVRRAKRVNTXXXXXXXXXXXXXXXXA-EVAWLSIETAAGSNEEQEPLFVHHRSVDDLL 1212
VL+TNKLV+ADAA+LL DGGTRR+++VDSHIGILPAGLPADGRALA KAMEYCRSHRREYGEPIPGR+LA+RLGEF+HAACVRWGSRAYPNALF+ACWGE D R G G ++ + V ET A V G GG XXXXXXX E +V DRD+GF+LYVVDP GA RR+RAACTGRGS+R RKWLH G+ + A A G+ + A G + E S E GG+ A + +XXXXXXXXXXXXXXXXXXXXXXXX Q PP SQMTC EAARAMVR A+RV EVAWLSI+ EP+FVHHRS + L
Sbjct: 71 VLMTNKLVTADAAKLLVDGGTRRVFRVDSHIGILPAGLPADGRALAHKAMEYCRSHRREYGEPIPGRLLAERLGEFIHAACVRWGSRAYPNALFVACWGEGAPDTPASLRSEGGHRSGGSDANIVVTGGKSVSKPETKETAVVEKGGGGVEPVLHDDRQPVXXXXXXXXXXXXXXXXXDDGEGLVMDRDAGFQLYVVDPGGAVRRHRAACTGRGSSRARKWLHRRVT---GAAAPAPAPGKEAVSGGASGVG------------------------PSASAEREKNGGWSPEAGGRDDAAEEDGDDRSXXXXXXXXXXXXXXXXXXXXXXXXXXGVRQRGRRRQQPPFSQMTCAEAARAMVREARRVRAGEPGKAGGGGSEAVAGLPEVAWLSIDKGG------EPVFVHHRSTERLF 455
BLAST of mRNA_M-pyrifera_M_contig12636.5315.1 vs. uniprot
Match: A0A835ZBF0_9STRA (Nucleophile aminohydrolase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBF0_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 1.370e-16 Identity = 46/102 (45.10%), Postives = 57/102 (55.88%), Query Frame = 1
Query: 1 VLVTNKLVSADAAELLTDGGTRRIYKVDSHIGILPAGLPADGRALARKAMEYCRSHRREYGEPIPGRVLADRLGEFLHAACVRWGSRAYPNALFIACWGERD 306
VL KL A L + TRRIY+V +G+LPAGL ADGR + A E R HR YGEP+ GRVLA +LG FLH + R + +AC E+D
Sbjct: 61 VLAIRKLSQAKTPSLKPERSTRRIYRVGDAVGVLPAGLSADGRFVGATAAELVRRHRASYGEPLSGRVLAVQLGVFLHMLSLERALRPLATSALVACCTEQD 162
BLAST of mRNA_M-pyrifera_M_contig12636.5315.1 vs. uniprot
Match: A8HP17_CHLRE (20S proteasome alpha subunit G n=8 Tax=Chlamydomonadales TaxID=3042 RepID=A8HP17_CHLRE) HSP 1 Score: 89.0 bits (219), Expect = 1.420e-16 Identity = 42/98 (42.86%), Postives = 61/98 (62.24%), Query Frame = 1
Query: 1 VLVTNKLVSADAAELLTDGGTRRIYKVDSHIGILPAGLPADGRALARKAMEYCRSHRREYGEPIPGRVLADRLGEFLHAACVRWGSRAYPNALFIACW 294
VL KLV ++LL +G RRI+ +D H+G+ AGL DGR +A +A + S++R YGEPIPG VL +R+G ++H + W R Y AL +A +
Sbjct: 47 VLACEKLV---LSKLLVEGSNRRIHNIDRHVGVAVAGLAPDGRMVANRAWDEAASYKRVYGEPIPGHVLCERVGSYVHMFNLYWSLRPYGAALLLAAY 141
BLAST of mRNA_M-pyrifera_M_contig12636.5315.1 vs. uniprot
Match: A0A835WHU8_9CHLO (PROTEASOME_ALPHA_1 domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WHU8_9CHLO) HSP 1 Score: 88.6 bits (218), Expect = 1.940e-16 Identity = 42/98 (42.86%), Postives = 61/98 (62.24%), Query Frame = 1
Query: 1 VLVTNKLVSADAAELLTDGGTRRIYKVDSHIGILPAGLPADGRALARKAMEYCRSHRREYGEPIPGRVLADRLGEFLHAACVRWGSRAYPNALFIACW 294
VL KLV ++LL +G RRI+ +D H+G+ AGL DGR +A +A + S++R YGEPIPG VL +R+G ++H + W R Y AL +A +
Sbjct: 47 VLACEKLV---LSKLLVEGSNRRIHNIDRHVGVAVAGLAPDGRMVANRAWDEAASYKRVYGEPIPGHVLCERVGSYVHMFNLYWSLRPYGAALLLATY 141
BLAST of mRNA_M-pyrifera_M_contig12636.5315.1 vs. uniprot
Match: L1JB89_GUITC (Proteasome subunit alpha type n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1JB89_GUITC) HSP 1 Score: 80.1 bits (196), Expect = 1.850e-13 Identity = 42/109 (38.53%), Postives = 65/109 (59.63%), Query Frame = 1
Query: 1 VLVTNKLVSADAAELLTDGGTRRIYKVDSHIGILPAGLPADGRALARKAMEYCRSHRREYGEPIPGRVLADRLGEFLHAACVRWGSRAYPNALFIACWGERDRGIEKRG 327
VL KLV +++L +G +RR+ VD H+G+ +GL ADGR L +A + S++ YGEPIPG+VLA+R+ F+HA + W R + ++ I G++K G
Sbjct: 47 VLGFEKLV---ISKMLVEGSSRRLLTVDDHVGMAVSGLLADGRQLVNRARDEAASYKEFYGEPIPGKVLAERVAGFVHAYTMYWSVRPFGASVLIG-------GVDKDG 145
BLAST of mRNA_M-pyrifera_M_contig12636.5315.1 vs. uniprot
Match: E1Z9U8_CHLVA (PROTEASOME_ALPHA_1 domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z9U8_CHLVA) HSP 1 Score: 79.0 bits (193), Expect = 4.520e-13 Identity = 37/100 (37.00%), Postives = 59/100 (59.00%), Query Frame = 1
Query: 1 VLVTNKLVSADAAELLTDGGTRRIYKVDSHIGILPAGLPADGRALARKAMEYCRSHRREYGEPIPGRVLADRLGEFLHAACVRWGSRAYPNALFIACWGE 300
VL KL+ +++L + RR + VD H G+ AG+ ADGR++ +AM ++ YG+PIPG VLA+RLG ++H + W R Y + +A +G+
Sbjct: 47 VLGAEKLI---ISKMLVENSNRRTFPVDRHAGVATAGVAADGRSIVSRAMSEANQYKSFYGDPIPGHVLAERLGSYVHVFNLYWYVRPYGVSTLLATYGK 143
BLAST of mRNA_M-pyrifera_M_contig12636.5315.1 vs. uniprot
Match: A0A139AK10_GONPJ (Proteasome subunit alpha type (Fragment) n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AK10_GONPJ) HSP 1 Score: 75.9 bits (185), Expect = 5.430e-12 Identity = 42/105 (40.00%), Postives = 59/105 (56.19%), Query Frame = 1
Query: 1 VLVTNKLVSADAAELLTDGGTRRIYKVDSHIGILPAGLPADGRALARKAMEYCRSHRREYGEPIPGRVLADRLGEFLHAACVRWGSRAYPNALFIACWGERDRGI 315
VL KLV A++LL G +RI VD+HIG+ AGL AD R L +A E +S+R Y PIPGRV ADRL +++ A + R + + + W + G+
Sbjct: 47 VLAVEKLV---ASKLLVQGSNKRIQTVDTHIGVGTAGLLADSRHLVNRAREDAQSYRELYLTPIPGRVSADRLSQYVQAYTLYASVRPFGISAILGAWDKTGPGV 148
BLAST of mRNA_M-pyrifera_M_contig12636.5315.1 vs. uniprot
Match: A0A0D2MTK8_9CHLO (20S proteasome subunit alpha 7 n=2 Tax=Selenastraceae TaxID=35466 RepID=A0A0D2MTK8_9CHLO) HSP 1 Score: 75.1 bits (183), Expect = 9.560e-12 Identity = 34/86 (39.53%), Postives = 52/86 (60.47%), Query Frame = 1
Query: 37 AELLTDGGTRRIYKVDSHIGILPAGLPADGRALARKAMEYCRSHRREYGEPIPGRVLADRLGEFLHAACVRWGSRAYPNALFIACW 294
++LL + +RRI+ +D H GI AGL DGR + +A + +++ YGEPIPGRVL +RL ++H + W R Y A +A +
Sbjct: 54 SKLLVERSSRRIHNIDRHAGICMAGLLPDGRMVVNRAADEATNYKSFYGEPIPGRVLCERLASYMHLFNLYWSMRPYGAAGLLATY 139
BLAST of mRNA_M-pyrifera_M_contig12636.5315.1 vs. uniprot
Match: A0A2G4T651_RHIZD (Proteasome subunit alpha type n=6 Tax=Rhizopus TaxID=4842 RepID=A0A2G4T651_RHIZD) HSP 1 Score: 74.3 bits (181), Expect = 1.870e-11 Identity = 40/102 (39.22%), Postives = 58/102 (56.86%), Query Frame = 1
Query: 1 VLVTNKLVSADAAELLTDGGTRRIYKVDSHIGILPAGLPADGRALARKAMEYCRSHRREYGEPIPGRVLADRLGEFLHAACVRWGSRAYPNALFIACWGERD 306
VL KL+ + +LL G RRI D HIGI AGL ADGR L +A + ++ R Y +PIPG+ +ADRLG+++ A + R + + IA E++
Sbjct: 47 VLAVEKLIQS---KLLVQGANRRIQSADLHIGIATAGLLADGRHLVNRARDEAQAWRDIYRQPIPGKTIADRLGQYVSAYTLYSSVRPFGTSTIIATMTEKE 145
BLAST of mRNA_M-pyrifera_M_contig12636.5315.1 vs. uniprot
Match: I1CV23_RHIO9 (Proteasome subunit alpha type n=2 Tax=Rhizopus TaxID=4842 RepID=I1CV23_RHIO9) HSP 1 Score: 73.2 bits (178), Expect = 1.880e-11 Identity = 38/103 (36.89%), Postives = 59/103 (57.28%), Query Frame = 1
Query: 1 VLVTNKLVSADAAELLTDGGTRRIYKVDSHIGILPAGLPADGRALARKAMEYCRSHRREYGEPIPGRVLADRLGEFLHAACVRWGSRAYPNALFIACWGERDR 309
VL KL+ + +LL G RRI D HIGI AGL ADGR + +A + ++ R Y +PIPG+ +ADRLG+++ A + R + + +A E+++
Sbjct: 47 VLAVEKLIQS---KLLVQGANRRIQSADLHIGIASAGLLADGRHVVNRARDEAQAWRDIYRQPIPGKTIADRLGQYVSAYTLYSSVRPFGTSTIVATMTEKEQ 146 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12636.5315.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12636.5315.1 >prot_M-pyrifera_M_contig12636.5315.1 ID=prot_M-pyrifera_M_contig12636.5315.1|Name=mRNA_M-pyrifera_M_contig12636.5315.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=404bp VLVTNKLVSADAAELLTDGGTRRIYKVDSHIGILPAGLPADGRALARKAMback to top mRNA from alignment at M-pyrifera_M_contig12636:239..3630+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12636.5315.1 ID=mRNA_M-pyrifera_M_contig12636.5315.1|Name=mRNA_M-pyrifera_M_contig12636.5315.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3392bp|location=Sequence derived from alignment at M-pyrifera_M_contig12636:239..3630+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12636:239..3630+ >mRNA_M-pyrifera_M_contig12636.5315.1 ID=mRNA_M-pyrifera_M_contig12636.5315.1|Name=mRNA_M-pyrifera_M_contig12636.5315.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2424bp|location=Sequence derived from alignment at M-pyrifera_M_contig12636:239..3630+ (Macrocystis pyrifera P11B4 male)back to top |