mRNA_M-pyrifera_M_contig12633.5312.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12633.5312.1 vs. uniprot
Match: D7FNL6_ECTSI (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNL6_ECTSI) HSP 1 Score: 575 bits (1482), Expect = 4.590e-191 Identity = 457/757 (60.37%), Postives = 512/757 (67.64%), Query Frame = 1
Query: 361 SDAPAKCVEHSKHYKRQAQLVXXXXXXXXXXXXXXXLDLLPRAVSHEAAVSLCSRVQTEGPANCTNARGQLSHGLELTAXXXXXXXXXXXXXXFRRSTLGFKLSTDDRVELCIGAQTDAPARCAGNIRDRRLEPFEXXXXXXXXXXXXXXXXLASLPPSLSSENRVTLCQGAKESNPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGAECAKMARHTVGDTNDIVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFV--AAPAQIPAEILVEAXXXXXXXXXXXXXXASMPRALHASAGG-AVCPLDPEAGNLPRRRLEYRLAGRLCRDASDNSPAECARSAPSQLSDGEVEVLCAAKSIPQXXXXXXXXXXXXXXXFSSRNAASLCRGAGSDAPAACAAMVALRIGEAGRLAXXXXXXXXXXXXXXNSVSVSRALSAVEIAECKSAVPQPSGLRITKLEYEGEVLFVDRPMRATLEVRDQWGGAIPSDSSTVVRASVALRGSDGASVNAVGRFNTSSEGVVHFSQLSFSGAGSLTLQFSIDGSDG-----GNTPLAAALVIVAETEHGVVARRCGRIFRQLACPPEAERERA------DEG-ARGHPEPVR------TEAVSIVSGGTTAAWQVLSCQQVLEENGVHVTYL-PRGTSSLNAWLWYHPGIEVLETGAGLPSRSQPAWQTLGVERGAHAREVRRAYYRQSLLWHPDRWVRHTMHSARAQEVFEIVSEAYAWMVN 2565
S APA CVEHS KR+ LV LDLLP+ + EAAV TNAR QL +G ++T XXXXXXXXXXXXXFRRS L LSTD+RVELC+GA+TDAPARCAG +RDRR+ P XXXXXXXXXXXXXXXLAS PPSLS+E+RV LCQGA E +PT XXXXXXXXXXXXXXXXXXXXXXXXX XXXXXX XXXXXXXXXXX AAP QIPA++ VE XXXXXXXXXXXXXAS PR L AVCPLDPEAG PRR +++RLA R+CRDA D+ PA CAR+AP ++SD +VEVLCAA P FS +AASLCRGA S AP ACA A RIGEAGRLAXXXXXXXXXXXXXXNSVS + A SA E+ EC+ AVP+PS L IT L +EGE LF D+PM ATLEV DQWGG I DSSTVVRASVALRGS+GA NA GRFNTS GVVHFS LSFSG+G+LTLQF IDG+D N PLAAA VIV ETEHG + RRC +F +LACP + E A D G G P VR TEAVS VSGG AAW V++CQQVLEENG++V Y+ T L A LWYHPGIE LETGAGLP+R QPAW+ LGV+R A RE+RRAYYRQSLLWHPDRWVR+ +HSARAQ+VFE+V +AY WMV+
Sbjct: 5 SQAPALCVEHSVQSKRKPHLVVDVCKGASNVAPAECLDLLPQNLPLEAAVGXXXXXXXXXXXXXTNARDQLRNGPDITVRXXXXXXXXXXXXXFRRSALATALSTDERVELCVGARTDAPARCAGQVRDRRISPPNKXXXXXXXXXXXXXXXLASTPPSLSAEDRVGLCQGAAEESPTTPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSAAPAHCAKAAFRAGADRRLAAVXXXXXXXXXXXXXXXAAPRQIPADVRVETCXXXXXXXXXXXXXASGPRELQGQPDWEAVCPLDPEAGRRPRRGVDHRLAARVCRDALDDKPALCARAAPLRMSDSDVEVLCAADGQPGGEETADCAAAGLMIGFSGASAASLCRGASSGAPVACAETAAHRIGEAGRLAXXXXXXXXXXXXXXNSVSGAGAPSASEVEECREAVPRPSRLHITDLGHEGETLFPDQPMHATLEVWDQWGGKIHKDSSTVVRASVALRGSNGAVANAHGRFNTSDVGVVHFSHLSFSGSGNLTLQFFIDGNDSKDVGAANVPLAAARVIVEETEHGAILRRCRAVFSRLACPWPVKGEGASGEWVSDVGMGTGAPHQVRPSSSVATEAVSTVSGGAGAAWYVMTCQQVLEENGINVAYVYSPSTEPLLALLWYHPGIETLETGAGLPTRDQPAWERLGVDRDASGRELRRAYYRQSLLWHPDRWVRYAIHSARAQDVFELVGDAYEWMVS 761
BLAST of mRNA_M-pyrifera_M_contig12633.5312.1 vs. uniprot
Match: A0A836CJW3_9STRA (J domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJW3_9STRA) HSP 1 Score: 197 bits (501), Expect = 2.600e-49 Identity = 119/286 (41.61%), Postives = 163/286 (56.99%), Query Frame = 1
Query: 1702 SAVEIAECKSAVPQPSGLRITKLEYEGE--VLFVDRPMRATLEVRDQWGGAIPSDSSTVVRASVALRGSDGASVNAVGRFNTSSEGVVHFSQLSFSGAGSLTLQFSIDGSDGGNTPLAAALVIVAETEHGVVARRCGRIFRQLACPPEAERERADEGARGHPEPVRTEAVSIVSGGTTAAWQVLSCQQVLEENGVHVTYLPRGTSSLNAWLWYHPGIEVLETGAGLPSRSQPAWQTLGVERGAHAREVRRAYYRQSLLWHPDRWVRHTMHSARAQEVFEIVSEAYA 2553
+A +I +C+ A P + + + +L++ GE VL+ + A LEV+DQWG + DS T VRAS+A RGS+GA + GR N + +GVV FS L+FS G+LTL+F + G+ LA+AL+ V ET+ AR CG + R L CP +A R A + E ++V +W + C L G V R AW+WY P +E L TG G+P+ A + LG+ GA +VRRAYYR+SL WHPDRW RH + RAQ VFE+VSEAYA
Sbjct: 473 TARQIEDCRGAAPVHTSIGVRELKHAGEGGVLYTGARVEAVLEVKDQWGRFMEWDSGTYVRASLAPRGSNGAFIGGAGRVNATVDGVVRFSHLTFSAPGNLTLRFDVGGAH-----LASALLRVVETKEAAFARACGAVVRALRCPSDAAAARRAAAAELN---AADEIFALVP--PPLSWNAIVCGGALRNQGFRVAPGWRRA----AWVWYTPAVEALATGRGVPTPLMTALERLGLGEGASGGDVRRAYYRESLRWHPDRWARHPALAERAQAVFELVSEAYA 744
BLAST of mRNA_M-pyrifera_M_contig12633.5312.1 vs. uniprot
Match: A0A7S2SUI0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUI0_9STRA) HSP 1 Score: 150 bits (380), Expect = 8.000e-37 Identity = 101/292 (34.59%), Postives = 154/292 (52.74%), Query Frame = 1
Query: 1723 CKSAVPQPSGLRITKLEYE---GEVLFVDRPMRATLEVRDQWGGAIPSDSSTVVRASVALRGSDGASVNAVGRFNTSSEGVVHFSQLSFSGAGSLTLQFSIDGSDGGNTPLAAALVIVAETEHGVVARRCGR-IFRQLA--CPPEAERERADEGARGHPEPVRTEAVSIVSGGTTAAWQVLSCQQVLEENGVHVTYLPRGTSSLNAWLWYHPGIEVLETGAGLPSRSQPAWQTLGVERGAHAREVRRAYYRQSLLWHPDRWVRHTMHSARAQEVFEIVSEAYAWMVNEASNG 2580
C++A PSG++I ++ ++ G+ +F + TL+V DQ+G + D+ T+V A++ S GA + + R N S GVV L FS G L F I G+ + +V E + +CG+ F +L P A + H +P+R + ++ + SC ++LEE GV VT G + W+WY P +E L+TG GLP+ S W LG+ A AR+VR+AYYRQSL+WHPDRW + +H AQ+ FE++SEAY +V+ +S G
Sbjct: 12 CRTATATPSGVQILRMWWDTDRGDGIFAKSNVHITLQVLDQFGTPMLGDNETIVSATLDSTTSQGAMLEGI-RSNVSVAGVVELHYLRFSQDGEFDLHFGIGGN---RVQMMRVVVSPHEDDRFGPTGKCGQEFFAKLNSFAPSFAVNSSQLVAGQDH-DPLRVQEKVSYMTWPSSLEAMSSCSRILEEAGVRVTSGWGG----DLWVWYRPAMEALDTGVGLPTASMDFWTRLGLSSTASARDVRKAYYRQSLVWHPDRWASYPLHRRLAQDAFEVISEAYRQLVSLSSGG 294
BLAST of mRNA_M-pyrifera_M_contig12633.5312.1 vs. uniprot
Match: A0A7S2SUF7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUF7_9STRA) HSP 1 Score: 153 bits (387), Expect = 4.040e-35 Identity = 127/417 (30.46%), Postives = 191/417 (45.80%), Query Frame = 1
Query: 1369 LCRDASDNSPAECARSAPSQLSDGEVEVLCAAKSIPQXXXXXXXXXXXXXXXFSSRNA-------ASLCRGAGSDAPAACAAMVALRIGEAGRLAXXXXXXXXXXXXXXNSVSVSRALSAVEIAECKSAVPQPSGLRITKLEYE---GEVLFVDRPMRATLEVRDQWGGAIPSDSSTVVRASVALRGSDGASVNAVGRFNTSSEGVVHFSQLSFSGAGSLTLQFSIDGSDGGNTPLAAALVIVAETEHGVVARRCGR-IFRQLA--CPPEAERERADEGARGHPEPVRTEAVSIVSGGTTAAWQVLSCQQVLEENGVHVTYLPRGTSSLNAWLWYHPGIEVLETGAGLPSRSQPAWQTLGVERGAHAREVRRAYYRQSLLWHPDRWVRHTMHSARAQEVFEIVSEAYAWMVNEASNG 2580
LCR A D ++CARSAP L LCA + ++ A +LC A + P CA+ +A + G R L + C++A PSG++I ++ ++ G+ +F + TL+V DQ+G + D+ T+V A++ S GA + + R N S GVV L FS G L F I G+ + +V E + +CG+ F +L P A + H +P+R + ++ + SC ++LEE GV VT G + W+WY P +E L+TG GLP+ S W LG+ A AR+VR+AYYRQSL+WHPDRW + +H AQ+ FE++SEAY +V+ +S G
Sbjct: 274 LCRHA-DPRASDCARSAPPSLPASIRARLCARSTSTAPARCAVASPFSMHRPMANAQAHKAEEPVVALCSQAAAPTPGHCASFLARQQG--------------------------RELVPSLVEYCRTATATPSGVQILRMWWDTDRGDGIFAKSNVHITLQVLDQFGTPMLGDNETIVSATLDSTTSQGAMLEGI-RSNVSVAGVVELHYLRFSQDGEFDLHFGIGGN---RVQMMRVVVSPHEDDRFGPTGKCGQEFFAKLNSFAPSFAVNSSQLVAGQDH-DPLRVQEKVSYMTWPSSLEAMSSCSRILEEAGVRVTSGWGG----DLWVWYRPAMEALDTGVGLPTASMDFWTRLGLSSTASARDVRKAYYRQSLVWHPDRWASYPLHRRLAQDAFEVISEAYRQLVSLSSGG 654
BLAST of mRNA_M-pyrifera_M_contig12633.5312.1 vs. uniprot
Match: A0A5D6XN52_9STRA (J domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XN52_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 4.950e-10 Identity = 82/308 (26.62%), Postives = 132/308 (42.86%), Query Frame = 1
Query: 1684 SVSRALSAVEIAECKSAVPQPSGLRITKLEYEGEVLFVDRPMRATLEVRDQWGGAIPSDSSTVVRASVALRGSDGASVNAVGRFNTSS------EGVVHFSQLSFSGAGSLTLQFSIDGSDG--GNTPLAAALVIVAETEHGVVARRCGRIFRQLACPPEAERERADEGARGHPEPVRT--EAVSIVSGGTTAAWQVLSCQQVLEENGVHVTYLPRGTSSLNAWLWYHPGIEVLETGAGLPSRSQPAWQTLGVERGAHAREVRRAYYRQSLLWHPDRWVRHTMHS--ARAQEVFEIVSEAYAWMVNEA 2571
+V+R+L + EC++ VP P+ L I ++ Y L + L V DQ+G + S + +R SV ++G + A R G F+ + F G + F + T A + I + + + +RRC +F QL C AD + P T E + + VL C+ E+ + L G +S L H T A +PS AW LG++ GA+ ++R AY+R+SL WHPD+W + S RA +V+ V+ AY ++ +A
Sbjct: 576 AVTRSL----VLECRAVVPVPASLEIAQVSYRCRQLVPKCRLSVQLRVHDQFGVEMQSWTGGYLRVSVTP--TEGTAPEAGDRVLHGPTHAPIINGSAAFTDIFFIEPGEFVVTFGPAAAPTLLSITEKVARIRIHEDAQERLRSRRCRALFAQLECG-------ADRTEQPGPSANDTVGEVFHLFELPSRHYLDVLGCEGFWLEHSGGMRVL--GATSTRFVLAIHHASYRFLTNARVPSAGMSAWACLGLDEGANRSQIRHAYHRKSLEWHPDKWSGASTRSLQGRAAQVYARVTLAYNELLQDA 868
BLAST of mRNA_M-pyrifera_M_contig12633.5312.1 vs. uniprot
Match: K3WQH3_GLOUD (J domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQH3_GLOUD) HSP 1 Score: 65.5 bits (158), Expect = 3.660e-7 Identity = 71/300 (23.67%), Postives = 122/300 (40.67%), Query Frame = 1
Query: 1714 IAECKSAVPQPSGLRITKLEYEGEVLFVDRPMRATLEVRDQWGGAIPSDSSTVVR--ASVALRGSDGASVNAVGRFNTSSE------GVVHFSQLSFSGAGSLTLQF---SIDGSDGGNTPLAAALVIVAETEHGVV---ARRCGRIFRQLACPPEAERERADEGARGHPEPVRTEAVSIVSGGTTAAWQVLSCQQVLEENGVHVTYLPRGTSSLNAWLWYHPGIEVLETGAGLPSRSQPAWQTLGVERGAHAREVRRAYYRQSLLWHPDRW--VRHTMHSARAQEVFEIVSEAYAWMVN 2565
I EC+ AV P+ I ++ Y+ L + + +L V DQ+G +P+ + V A+ S+ + + GR G F +SF+ AG + F S S L +V + E + +RC +F + C R D H ++ +SC+ E+ + + +GT+S H T A +P W LG+ A+ ++RRAY+R+SL WHPD+W M A+A++++ +++ AY + N
Sbjct: 404 IQECRYAVATPASTEIAQVSYQCRELIPNCLITISLRVLDQFGEEMPAWTGGYVHIAATPTTDTSNTEHMTSEGRILVGQSHALIVNGTAVFKDISFAEAGEFIITFRPPSASSSSLIGVFLEEKIVRIRIHEDKLAQLRTKRCKALFARFQC------SRDDTADPFH----------VLDLSNRFYLDAMSCEAFWHEHTGGLRF--QGTTSQRLLYVIHRASYHFLTDASIPHAEMSPWACLGLASSANRSQIRRAYHRKSLEWHPDKWSSADTIMLRAQAEKIYALITHAYHVLFN 685
BLAST of mRNA_M-pyrifera_M_contig12633.5312.1 vs. uniprot
Match: A0A2R5GI11_9STRA (DnaJ family protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GI11_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 4.100e-6 Identity = 41/122 (33.61%), Postives = 66/122 (54.10%), Query Frame = 1
Query: 2233 AWQVLS--CQQVLEENGVHVTYLPRGTSSLNAWLWYHPGIEVLETGAGLPSRSQPAWQTLGVERGAHAREVRRAYYRQSLLWHPDRWVR-HTMHSARAQEVFEIVSEAYAWMVNEASNGQKE 2589
AW +L+ C+ L + GV + P+ + +L G L G G+P+ A + LGVE A + ++R+AYYR SL WHPDRWV H ++A +VF+ ++ A + + S+ K+
Sbjct: 1092 AWWLLARGCEDELADIGVQLLRSPQPIAH-GVFLHIKSGPAKLLAGIGVPTEEMSAEEILGVEANATSSQLRKAYYRASLEWHPDRWVSFHPDLQSQAADVFQRIATASRELQDRLSSQVKD 1212
BLAST of mRNA_M-pyrifera_M_contig12633.5312.1 vs. uniprot
Match: A0A6A2X7N5_HIBSY (Putative kinesin heavy chain n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2X7N5_HIBSY) HSP 1 Score: 55.5 bits (132), Expect = 1.310e-5 Identity = 26/57 (45.61%), Postives = 38/57 (66.67%), Query Frame = 1
Query: 2395 WQTLGVERGAHAREVRRAYYRQSLLWHPDRWVRHTMHSARAQEVFEIVSEAYAWMVN 2565
+ LGV + A A E+R AY RQ+L WHPDRW+++ S A++ F+ + EAY+ VN
Sbjct: 9 YSVLGVCKQASASEIRDAYRRQALKWHPDRWMKNPEESGEAKKRFQKIQEAYSGFVN 65 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12633.5312.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12633.5312.1 >prot_M-pyrifera_M_contig12633.5312.1 ID=prot_M-pyrifera_M_contig12633.5312.1|Name=mRNA_M-pyrifera_M_contig12633.5312.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=864bp GREIRSDRNNNSNRLGLCLLVLTISSCWYGALGVTECSRVAPYFLTAEQRback to top mRNA from alignment at M-pyrifera_M_contig12633:2639..6417- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12633.5312.1 ID=mRNA_M-pyrifera_M_contig12633.5312.1|Name=mRNA_M-pyrifera_M_contig12633.5312.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3779bp|location=Sequence derived from alignment at M-pyrifera_M_contig12633:2639..6417- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12633:2639..6417- >mRNA_M-pyrifera_M_contig12633.5312.1 ID=mRNA_M-pyrifera_M_contig12633.5312.1|Name=mRNA_M-pyrifera_M_contig12633.5312.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=5184bp|location=Sequence derived from alignment at M-pyrifera_M_contig12633:2639..6417- (Macrocystis pyrifera P11B4 male)back to top |