mRNA_M-pyrifera_M_contig126277.5304.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig126277.5304.1 vs. uniprot
Match: A0A3D5DFD6_9GAMM (Arabinose-5-phosphate isomerase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DFD6_9GAMM) HSP 1 Score: 244 bits (622), Expect = 1.280e-79 Identity = 127/165 (76.97%), Postives = 142/165 (86.06%), Query Frame = 1
Query: 10 IRRLGVPLIAMTGNAQSSLAKQATVHIDVGVAEEACPLGLAPTSSTTAALAMGDALAIAMLEARGFTEEDFARSHPGGALGRRLLLKIGGLIHTGEEMPTVTPTAAISEALVEMTRKGLGMTAVVDAAGQVRGIFTDGDLRRVIDQRVDINSTSIESVMTRDCTT 504
IRRLG+PLIAMTG+A S+LA QATVH++V V EEACPLGLAPTSST AALAMGDALAIAML+ARGFTEEDFA SHPGGALGRRLLLKI ++HTG EMPTV +I +AL EMT KGLGMTAV+DA + GIFTDGDLRRV+DQ+VDIN+TSI SVM DCTT
Sbjct: 1 IRRLGIPLIAMTGDANSTLAVQATVHLNVAVREEACPLGLAPTSSTAAALAMGDALAIAMLQARGFTEEDFALSHPGGALGRRLLLKISDVLHTGSEMPTVGHELSIGDALAEMTSKGLGMTAVIDAESHLLGIFTDGDLRRVLDQKVDINTTSIGSVMNSDCTT 165
BLAST of mRNA_M-pyrifera_M_contig126277.5304.1 vs. uniprot
Match: A0A7C1XZL6_9GAMM (Arabinose 5-phosphate isomerase n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A7C1XZL6_9GAMM) HSP 1 Score: 233 bits (595), Expect = 5.610e-74 Identity = 115/168 (68.45%), Postives = 145/168 (86.31%), Query Frame = 1
Query: 1 IPLIRRLGVPLIAMTGNAQSSLAKQATVHIDVGVAEEACPLGLAPTSSTTAALAMGDALAIAMLEARGFTEEDFARSHPGGALGRRLLLKIGGLIHTGEEMPTVTPTAAISEALVEMTRKGLGMTAVVDAAGQVRGIFTDGDLRRVIDQRVDINSTSIESVMTRDCTT 504
+PLI+RLGVPLI +TG S+LA+ A V++DVGV +EACPLGLAPT+STTA LAMGDALA+A+LE RGFTEEDFA +HPGG+LGRRLLL+I L+HTGE +P+V A+++EAL EMTRKGLGMTAVVD G+V GIFTDGDLRR +D+++D+++TS+ +MTRDCTT
Sbjct: 110 LPLIKRLGVPLITLTGRPDSTLARAADVNLDVGVEKEACPLGLAPTASTTATLAMGDALAVALLETRGFTEEDFALAHPGGSLGRRLLLRIDDLMHTGERLPSVGMEASLAEALHEMTRKGLGMTAVVDGEGRVAGIFTDGDLRRAVDRKIDLHATSLAELMTRDCTT 277
BLAST of mRNA_M-pyrifera_M_contig126277.5304.1 vs. uniprot
Match: A0A5C7L5Z1_9GAMM (Arabinose 5-phosphate isomerase n=1 Tax=Sinobacteraceae bacterium TaxID=1969813 RepID=A0A5C7L5Z1_9GAMM) HSP 1 Score: 233 bits (594), Expect = 7.950e-74 Identity = 116/164 (70.73%), Postives = 138/164 (84.15%), Query Frame = 1
Query: 1 IPLIRRLGVPLIAMTGNAQSSLAKQATVHIDVGVAEEACPLGLAPTSSTTAALAMGDALAIAMLEARGFTEEDFARSHPGGALGRRLLLKIGGLIHTGEEMPTVTPTAAISEALVEMTRKGLGMTAVVDAAGQVRGIFTDGDLRRVIDQRVDINSTSIESVMTR 492
+PLI+R+G PLIAMTG S+LAK A VH+DV VA+EACPL LAPT+STTA LAMGDALA+A+LEARGFT EDFA SHPGG+LGR+LLLKI L+HTGE +PTV PTA +SEAL+EMTRKGLGMTA+VD AG V G++TDGDLRR ++Q VD+ S I VMT+
Sbjct: 110 LPLIKRMGAPLIAMTGKPSSTLAKTADVHLDVSVAQEACPLNLAPTASTTATLAMGDALAVALLEARGFTPEDFAMSHPGGSLGRKLLLKIADLMHTGERLPTVAPTATLSEALLEMTRKGLGMTAIVDEAGAVLGVYTDGDLRRTLEQGVDVRSAKIVDVMTK 273
BLAST of mRNA_M-pyrifera_M_contig126277.5304.1 vs. uniprot
Match: A0A4R2L7X6_9GAMM (Arabinose 5-phosphate isomerase n=1 Tax=Plasticicumulans lactativorans TaxID=1133106 RepID=A0A4R2L7X6_9GAMM) HSP 1 Score: 231 bits (590), Expect = 3.200e-73 Identity = 116/169 (68.64%), Postives = 141/169 (83.43%), Query Frame = 1
Query: 1 IPLIRRLGVPLIAMTGNAQSSLAKQATVHIDVGVAEEACPLGLAPTSSTTAALAMGDALAIAMLEARGFTEEDFARSHPGGALGRRLLLKIGGLIHTGEEMPTVTPTAAISEALVEMTRKGLGMTAVVDAAGQVRGIFTDGDLRRVIDQRVDINSTSIESVMTRDCTTA 507
+PLI+RLGVPLIA+TGN QS+LA+ ATVHIDV VA+EACPLGLAPT+STTAALAMGDALAIA+LEARGFT EDFARSHPGG LGRRLLL I ++HTGE +P ++P A + + LVEM+RKGLG+ DA G+V G+FTDGDLRR +D+ +D+ ST++ VMT C TA
Sbjct: 110 LPLIKRLGVPLIALTGNPQSALARAATVHIDVSVAQEACPLGLAPTASTTAALAMGDALAIALLEARGFTAEDFARSHPGGRLGRRLLLLIDDVMHTGERLPQLSPDAPLRQVLVEMSRKGLGLAIAADADGRVLGVFTDGDLRRTLDRALDVRSTTLAEVMTSPCRTA 278
BLAST of mRNA_M-pyrifera_M_contig126277.5304.1 vs. uniprot
Match: A0A7C5TNG5_9GAMM (Arabinose-5-phosphate isomerase n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7C5TNG5_9GAMM) HSP 1 Score: 229 bits (584), Expect = 3.380e-73 Identity = 117/168 (69.64%), Postives = 140/168 (83.33%), Query Frame = 1
Query: 1 IPLIRRLGVPLIAMTGNAQSSLAKQATVHIDVGVAEEACPLGLAPTSSTTAALAMGDALAIAMLEARGFTEEDFARSHPGGALGRRLLLKIGGLIHTGEEMPTVTPTAAISEALVEMTRKGLGMTAVVDAAGQVRGIFTDGDLRRVIDQRVDINSTSIESVMTRDCTT 504
+PLI+RLGVPLIAMTGN S+LA+ ATVHIDV V +EACPLGLAPT+STTA LAMGDALAIA+LEARGFT EDFAR+HPGG LGRRLLL I ++HT E +P V + +ALVEMTRKGLGMTA+VD +V GIFTDGDLRR +D+ VD+++T +E+VMTR+C T
Sbjct: 44 LPLIKRLGVPLIAMTGNPASTLARAATVHIDVSVPQEACPLGLAPTASTTATLAMGDALAIALLEARGFTAEDFARTHPGGRLGRRLLLLIRDIMHTDEAVPKVREGTLLRDALVEMTRKGLGMTAIVDGEERVLGIFTDGDLRRALDREVDVHATPVEAVMTRNCKT 211
BLAST of mRNA_M-pyrifera_M_contig126277.5304.1 vs. uniprot
Match: A0A7C1CZQ7_9GAMM (Arabinose 5-phosphate isomerase n=1 Tax=Thioalkalivibrio sp. TaxID=2093813 RepID=A0A7C1CZQ7_9GAMM) HSP 1 Score: 231 bits (588), Expect = 7.030e-73 Identity = 111/169 (65.68%), Postives = 142/169 (84.02%), Query Frame = 1
Query: 1 IPLIRRLGVPLIAMTGNAQSSLAKQATVHIDVGVAEEACPLGLAPTSSTTAALAMGDALAIAMLEARGFTEEDFARSHPGGALGRRLLLKIGGLIHTGEEMPTVTPTAAISEALVEMTRKGLGMTAVVDAAGQVRGIFTDGDLRRVIDQRVDINSTSIESVMTRDCTTA 507
+PLI+R+GVPLIAMTGN S+LA++A VHID+ V +EACPLGLAPT+STTA LAMGDALA+A+LEARGFT +DFARSHPGG LGRRLLL +G ++H G E+PT + ++EAL+E+TRKGLGMT V+D Q+ G+FTDGDLRRV+DQ +D++ T++ +MTRDC TA
Sbjct: 113 VPLIKRIGVPLIAMTGNPGSNLAREADVHIDISVEKEACPLGLAPTASTTATLAMGDALAVALLEARGFTADDFARSHPGGRLGRRLLLHVGDIMHKGGEIPTTRESVPLAEALLEITRKGLGMTTVIDDTSQLLGVFTDGDLRRVLDQGIDVHKTTVGELMTRDCQTA 281
BLAST of mRNA_M-pyrifera_M_contig126277.5304.1 vs. uniprot
Match: A0A831RQI2_9GAMM (Arabinose 5-phosphate isomerase n=1 Tax=Sedimenticola thiotaurini TaxID=1543721 RepID=A0A831RQI2_9GAMM) HSP 1 Score: 229 bits (583), Expect = 4.790e-72 Identity = 115/169 (68.05%), Postives = 140/169 (82.84%), Query Frame = 1
Query: 1 IPLIRRLGVPLIAMTGNAQSSLAKQATVHIDVGVAEEACPLGLAPTSSTTAALAMGDALAIAMLEARGFTEEDFARSHPGGALGRRLLLKIGGLIHTGEEMPTVTPTAAISEALVEMTRKGLGMTAVVDAAGQVRGIFTDGDLRRVIDQRVDINSTSIESVMTRDCTTA 507
+PLI+RLGVPLIAMTGN S+LA+++ VH+DV V +EACPL LAPTSSTT ALAMGDALA+A+LEARGFTE+DFARSHPGG+LGRRLLL IG ++H+G+ +P V+ A + +ALVEMT KGLGMTAVVD G++ GI+TDGDLRR +D D+ IE VMTRDC TA
Sbjct: 119 LPLIKRLGVPLIAMTGNPNSNLARESDVHLDVSVEQEACPLNLAPTSSTTVALAMGDALAVALLEARGFTEQDFARSHPGGSLGRRLLLHIGDIMHSGDAIPVVSRDADLRDALVEMTNKGLGMTAVVDDQGRLAGIYTDGDLRRTLDHEHDLRHCPIERVMTRDCKTA 287
BLAST of mRNA_M-pyrifera_M_contig126277.5304.1 vs. uniprot
Match: A0A349LRH6_9GAMM (Arabinose 5-phosphate isomerase n=1 Tax=Rheinheimera sp. TaxID=1869214 RepID=A0A349LRH6_9GAMM) HSP 1 Score: 227 bits (579), Expect = 1.390e-71 Identity = 111/168 (66.07%), Postives = 145/168 (86.31%), Query Frame = 1
Query: 1 IPLIRRLGVPLIAMTGNAQSSLAKQATVHIDVGVAEEACPLGLAPTSSTTAALAMGDALAIAMLEARGFTEEDFARSHPGGALGRRLLLKIGGLIHTGEEMPTVTPTAAISEALVEMTRKGLGMTAVVDAAGQVRGIFTDGDLRRVIDQRVDINSTSIESVMTRDCTT 504
IP+++RLG+ LIAMTGNAQS+LA+ A +H+ V VA+EACPLGLAPT+STTAALAMGDALA+A+LEARGF+ +DFA SHPGG+LGRRLLL+I ++H E++P VT A++ +AL+E+++KGLGMT +V A G + GIFTDGDLRRV+DQRVDI+ T+I SVMT++C T
Sbjct: 108 IPVLKRLGISLIAMTGNAQSNLARLADIHVQVSVAQEACPLGLAPTASTTAALAMGDALAVALLEARGFSADDFALSHPGGSLGRRLLLRISDIMHKDEQIPLVTEDASLPQALLEISKKGLGMTGIVSATGSLAGIFTDGDLRRVLDQRVDIHQTTIASVMTKNCIT 275
BLAST of mRNA_M-pyrifera_M_contig126277.5304.1 vs. uniprot
Match: A0A1D8KAH1_9GAMM (Arabinose 5-phosphate isomerase n=1 Tax=Acidihalobacter aeolianus TaxID=2792603 RepID=A0A1D8KAH1_9GAMM) HSP 1 Score: 227 bits (579), Expect = 1.520e-71 Identity = 120/169 (71.01%), Postives = 140/169 (82.84%), Query Frame = 1
Query: 1 IPLIRRLGVPLIAMTGNAQSSLAKQATVHIDVGVAEEACPLGLAPTSSTTAALAMGDALAIAMLEARGFTEEDFARSHPGGALGRRLLLKIGGLIHTGEEMPTVTPTAAISEALVEMTRKGLGMTAVVDAAGQVRGIFTDGDLRRVIDQRVDINSTSIESVMTRDCTTA 507
+PLIRRLGVPLIA+TGN SSLA++ATVHIDV VA EACPLGLAPTSSTTA LAMGDALAIA+LEARGFT EDFARSHPGG LGRRLLL + ++ G+++P+V P ISEAL+E+TRKGLGMT VV +V G FTDGDLRR +D+ +DI+ TSI VMTR+C TA
Sbjct: 112 LPLIRRLGVPLIALTGNPGSSLAREATVHIDVSVAREACPLGLAPTSSTTATLAMGDALAIALLEARGFTAEDFARSHPGGRLGRRLLLHVADVMRRGQDVPSVAPETPISEALMEITRKGLGMTTVV-LDERVIGTFTDGDLRRTLDKAIDIHGTSIADVMTRNCKTA 279
BLAST of mRNA_M-pyrifera_M_contig126277.5304.1 vs. uniprot
Match: A0A161HQ24_9GAMM (Arabinose 5-phosphate isomerase n=8 Tax=Chromatiales TaxID=135613 RepID=A0A161HQ24_9GAMM) HSP 1 Score: 227 bits (579), Expect = 1.570e-71 Identity = 114/168 (67.86%), Postives = 139/168 (82.74%), Query Frame = 1
Query: 1 IPLIRRLGVPLIAMTGNAQSSLAKQATVHIDVGVAEEACPLGLAPTSSTTAALAMGDALAIAMLEARGFTEEDFARSHPGGALGRRLLLKIGGLIHTGEEMPTVTPTAAISEALVEMTRKGLGMTAVVDAAGQVRGIFTDGDLRRVIDQRVDINSTSIESVMTRDCTT 504
+PLIRRLG PLIA+TGN +S+LA++A VH+DV VA EACPLGLAPTSSTTA LAMGDALA+AMLEARGFT +DFARSHPGG LGRRLLL +G ++HTGE +P V A +++AL+E+TR+GLGMTAVVD + G++TDGDLRR +D+ +DI ST I VMTR C T
Sbjct: 112 LPLIRRLGAPLIALTGNPRSTLAREANVHLDVSVAAEACPLGLAPTSSTTATLAMGDALAVAMLEARGFTADDFARSHPGGRLGRRLLLHVGDIMHTGERIPLVRADAPLTDALMEITRQGLGMTAVVDEHRNLIGVYTDGDLRRTLDRGIDIRSTCIGDVMTRQCKT 279 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126277.5304.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig126277.5304.1 >prot_M-pyrifera_M_contig126277.5304.1 ID=prot_M-pyrifera_M_contig126277.5304.1|Name=mRNA_M-pyrifera_M_contig126277.5304.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=169bp IPLIRRLGVPLIAMTGNAQSSLAKQATVHIDVGVAEEACPLGLAPTSSTTback to top mRNA from alignment at M-pyrifera_M_contig126277:3..509- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig126277.5304.1 ID=mRNA_M-pyrifera_M_contig126277.5304.1|Name=mRNA_M-pyrifera_M_contig126277.5304.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=507bp|location=Sequence derived from alignment at M-pyrifera_M_contig126277:3..509- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig126277:3..509- >mRNA_M-pyrifera_M_contig126277.5304.1 ID=mRNA_M-pyrifera_M_contig126277.5304.1|Name=mRNA_M-pyrifera_M_contig126277.5304.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1014bp|location=Sequence derived from alignment at M-pyrifera_M_contig126277:3..509- (Macrocystis pyrifera P11B4 male)back to top |