mRNA_M-pyrifera_M_contig126268.5299.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig126268.5299.1 vs. uniprot
Match: A0A485KVA5_9STRA (Aste57867_12028 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KVA5_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 4.810e-18 Identity = 42/68 (61.76%), Postives = 49/68 (72.06%), Query Frame = 1
Query: 46 ANLTRGVLLRRYKRFLGDIELEDGTVETVHVPNTGPMIGLLDTPRARVLLETSPNPKRKYPKTLVAIE 249
+ L G L++RYKRFL DI+L+DG V TVH PNTGPM+GLLD P A V L S NPKRKY TL I+
Sbjct: 81 SKLVGGQLIKRYKRFLADIQLDDGEVVTVHCPNTGPMVGLLDIPNAPVQLSVSDNPKRKYAHTLEMIQ 148
BLAST of mRNA_M-pyrifera_M_contig126268.5299.1 vs. uniprot
Match: A0A067CR43_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CR43_SAPPC) HSP 1 Score: 84.7 bits (208), Expect = 1.450e-17 Identity = 45/73 (61.64%), Postives = 52/73 (71.23%), Query Frame = 1
Query: 52 LTRGVLLRRYKRFLGDIELEDGTVETVHVPNTGPMIGLLDTPRARVLLETSPNPKRKYPKTLVAIECVEDGKG 270
L +G LL+RYKRFL DI+L + V TVH PNTGPMIGLLD P A V L S NPKRKY TL I+ V +G+G
Sbjct: 91 LVQGKLLKRYKRFLADIQLANDEVVTVHCPNTGPMIGLLDLPLANVQLSVSDNPKRKYAHTLEQIQ-VHNGRG 162
BLAST of mRNA_M-pyrifera_M_contig126268.5299.1 vs. uniprot
Match: T0QED4_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QED4_SAPDV) HSP 1 Score: 84.3 bits (207), Expect = 2.020e-17 Identity = 44/73 (60.27%), Postives = 53/73 (72.60%), Query Frame = 1
Query: 52 LTRGVLLRRYKRFLGDIELEDGTVETVHVPNTGPMIGLLDTPRARVLLETSPNPKRKYPKTLVAIECVEDGKG 270
L +G LL+RYKRFL DI+L + V TVH PNTGPM+GLLD P A V L S NPKRKY TL I+ V++G+G
Sbjct: 91 LVQGKLLKRYKRFLADIQLANDEVVTVHCPNTGPMVGLLDMPLANVQLSLSDNPKRKYAHTLEQIQ-VDNGQG 162
BLAST of mRNA_M-pyrifera_M_contig126268.5299.1 vs. uniprot
Match: A0A1V9YTC4_9STRA (Sugar fermentation stimulation protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YTC4_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 3.090e-17 Identity = 47/80 (58.75%), Postives = 55/80 (68.75%), Query Frame = 1
Query: 31 GRIAKA--NLTRGVLLRRYKRFLGDIELEDGTVETVHVPNTGPMIGLLDTPRARVLLETSPNPKRKYPKTLVAIECVEDG 264
GR+ A L +G LL+RYKRFL D++L + V TVH PNTGPMIGLLD P A V L S NPKRKY TL I+ VE+G
Sbjct: 55 GRVVAAYPRLVQGQLLKRYKRFLADVQLANDEVVTVHCPNTGPMIGLLDLPLAPVQLSISDNPKRKYAHTLEHIQ-VENG 133
BLAST of mRNA_M-pyrifera_M_contig126268.5299.1 vs. uniprot
Match: A0A1I6SIZ4_9CAUL (Sugar fermentation stimulation protein homolog n=2 Tax=Caulobacterales TaxID=204458 RepID=A0A1I6SIZ4_9CAUL) HSP 1 Score: 79.3 bits (194), Expect = 4.520e-16 Identity = 41/74 (55.41%), Postives = 50/74 (67.57%), Query Frame = 1
Query: 43 KANLTRGVLLRRYKRFLGDIELEDGTVETVHVPNTGPMIGLLDTPRARVLLETSPNPKRKYPKTLVAIECVEDG 264
K+ L RG L+RRYKRFL D+ L+DG+ TVHVPN G M+GL P V L SP+PKRK P TL A+E + G
Sbjct: 4 KSPLERGTLIRRYKRFLADVTLDDGSTATVHVPNPGAMLGLT-APGLPVWLSRSPDPKRKLPLTLEAVELPDAG 76
BLAST of mRNA_M-pyrifera_M_contig126268.5299.1 vs. uniprot
Match: A0A0Q7DY52_9CAUL (Sugar fermentation stimulation protein homolog n=1 Tax=Brevundimonas sp. Root1279 TaxID=1736443 RepID=A0A0Q7DY52_9CAUL) HSP 1 Score: 78.2 bits (191), Expect = 1.240e-15 Identity = 42/76 (55.26%), Postives = 49/76 (64.47%), Query Frame = 1
Query: 37 IAKANLTRGVLLRRYKRFLGDIELEDGTVETVHVPNTGPMIGLLDTPRARVLLETSPNPKRKYPKTLVAIECVEDG 264
I K L RG L+RRYKRFL D+ L+DGT TVHVPN G M+GL P V L SP+PKRK P TL +E + G
Sbjct: 2 IFKTPLERGTLVRRYKRFLADVILDDGTATTVHVPNPGAMLGLT-APGLPVWLSRSPDPKRKLPLTLEMVELPDAG 76
BLAST of mRNA_M-pyrifera_M_contig126268.5299.1 vs. uniprot
Match: A0A6G0XYQ4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XYQ4_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 1.410e-15 Identity = 40/65 (61.54%), Postives = 46/65 (70.77%), Query Frame = 1
Query: 52 LTRGVLLRRYKRFLGDIELEDGTVETVHVPNTGPMIGLLDTPRARVLLETSPNPKRKYPKTLVAI 246
L G L++RYKRFL D++L+DGTV TVH PNTGPM+GLLD P A V L S N RKY TL I
Sbjct: 78 LVSGQLVQRYKRFLADVKLDDGTVVTVHCPNTGPMVGLLDQPMAPVQLSVSSNLTRKYKYTLEMI 142
BLAST of mRNA_M-pyrifera_M_contig126268.5299.1 vs. uniprot
Match: A0A024UV25_9STRA (Sugar fermentation stimulation protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UV25_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 1.580e-15 Identity = 42/71 (59.15%), Postives = 49/71 (69.01%), Query Frame = 1
Query: 52 LTRGVLLRRYKRFLGDIELEDG-TVETVHVPNTGPMIGLLDTPRARVLLETSPNPKRKYPKTLVAIECVED 261
L G L++RYKRFL D++L++ TV TVH PNTGPMIGLLD P A V L S N KRKY TL I+ V D
Sbjct: 97 LVSGKLIKRYKRFLADVQLDNSDTVVTVHCPNTGPMIGLLDLPLAPVRLSVSDNAKRKYAHTLEYIQVVND 167
BLAST of mRNA_M-pyrifera_M_contig126268.5299.1 vs. uniprot
Match: A0A519KKH6_9CAUL (DNA/RNA nuclease SfsA (Fragment) n=1 Tax=Brevundimonas sp. TaxID=1871086 RepID=A0A519KKH6_9CAUL) HSP 1 Score: 72.0 bits (175), Expect = 9.360e-15 Identity = 36/69 (52.17%), Postives = 46/69 (66.67%), Query Frame = 1
Query: 43 KANLTRGVLLRRYKRFLGDIELEDGTVETVHVPNTGPMIGLLDTPRARVLLETSPNPKRKYPKTLVAIE 249
K+ L G L+RRYKRFL D+ L DG+ T+HVPN G M+GL + P V + SP+PKRK P TL I+
Sbjct: 4 KSGLEHGTLIRRYKRFLADVSLADGSETTIHVPNPGAMLGLTE-PGLPVWMSRSPDPKRKLPLTLEMID 71
BLAST of mRNA_M-pyrifera_M_contig126268.5299.1 vs. uniprot
Match: A0A1W0ABH8_9STRA (Sugar fermentation stimulation protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABH8_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 1.030e-14 Identity = 39/66 (59.09%), Postives = 45/66 (68.18%), Query Frame = 1
Query: 52 LTRGVLLRRYKRFLGDIELEDGTVETVHVPNTGPMIGLLDTPRARVLLETSPNPKRKYPKTLVAIE 249
L +G LL+RYKRFL DI+L + + TVH PNTGPMI LLD P A V L S N KRKY TL I+
Sbjct: 52 LVQGQLLKRYKRFLADIQLGNDEIVTVHCPNTGPMISLLDVPNAGVQLSVSDNAKRKYAHTLEQIQ 117 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126268.5299.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig126268.5299.1 >prot_M-pyrifera_M_contig126268.5299.1 ID=prot_M-pyrifera_M_contig126268.5299.1|Name=mRNA_M-pyrifera_M_contig126268.5299.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=90bp MAAGEAGIVVGRIAKANLTRGVLLRRYKRFLGDIELEDGTVETVHVPNTGback to top mRNA from alignment at M-pyrifera_M_contig126268:6..275- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig126268.5299.1 ID=mRNA_M-pyrifera_M_contig126268.5299.1|Name=mRNA_M-pyrifera_M_contig126268.5299.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=270bp|location=Sequence derived from alignment at M-pyrifera_M_contig126268:6..275- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig126268:6..275- >mRNA_M-pyrifera_M_contig126268.5299.1 ID=mRNA_M-pyrifera_M_contig126268.5299.1|Name=mRNA_M-pyrifera_M_contig126268.5299.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=540bp|location=Sequence derived from alignment at M-pyrifera_M_contig126268:6..275- (Macrocystis pyrifera P11B4 male)back to top |