mRNA_M-pyrifera_M_contig126263.5296.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig126263.5296.1 vs. uniprot
Match: A0A538S4W8_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A538S4W8_9BACT) HSP 1 Score: 58.2 bits (139), Expect = 8.310e-9 Identity = 27/36 (75.00%), Postives = 30/36 (83.33%), Query Frame = 1
Query: 4 EGHSGPVYAVSFHPEGKLVASAGFDGKVRLNDAATG 111
EG GPVYAV+F P+GK +ASAGFDG VRLNDA TG
Sbjct: 419 EGERGPVYAVAFRPDGKQIASAGFDGLVRLNDAQTG 454
BLAST of mRNA_M-pyrifera_M_contig126263.5296.1 vs. uniprot
Match: A0A517XTN9_9BACT (Translocation protein TolB n=1 Tax=Urbifossiella limnaea TaxID=2528023 RepID=A0A517XTN9_9BACT) HSP 1 Score: 57.4 bits (137), Expect = 1.550e-8 Identity = 26/37 (70.27%), Postives = 31/37 (83.78%), Query Frame = 1
Query: 1 CEGHSGPVYAVSFHPEGKLVASAGFDGKVRLNDAATG 111
CEG SGP YAV++HP+GK +ASAGFDG V L+D ATG
Sbjct: 436 CEGVSGPAYAVAWHPDGKSIASAGFDGTVWLHDPATG 472
BLAST of mRNA_M-pyrifera_M_contig126263.5296.1 vs. uniprot
Match: A0A1W5DB26_9LECA (Nacht and wd40 domain protein n=1 Tax=Lasallia pustulata TaxID=136370 RepID=A0A1W5DB26_9LECA) HSP 1 Score: 51.6 bits (122), Expect = 1.690e-6 Identity = 25/37 (67.57%), Postives = 30/37 (81.08%), Query Frame = 1
Query: 4 EGHSGPVYAVSFHPEGKLVASAGFDGKVRLNDAATGA 114
EGHSGPV+AV F P+G+L+ASA FD VRL D A+GA
Sbjct: 3 EGHSGPVFAVVFSPDGQLLASASFDNTVRLWDPASGA 39
BLAST of mRNA_M-pyrifera_M_contig126263.5296.1 vs. uniprot
Match: A0A5C1ACV8_9BACT (NB-ARC domain protein n=1 Tax=Limnoglobus roseus TaxID=2598579 RepID=A0A5C1ACV8_9BACT) HSP 1 Score: 51.6 bits (122), Expect = 1.700e-6 Identity = 24/37 (64.86%), Postives = 30/37 (81.08%), Query Frame = 1
Query: 1 CEGHSGPVYAVSFHPEGKLVASAGFDGKVRLNDAATG 111
CE +G VYAV++ P+GK +ASAGFDGKV L+DA TG
Sbjct: 437 CERVTGAVYAVAWEPDGKAIASAGFDGKVWLHDATTG 473
BLAST of mRNA_M-pyrifera_M_contig126263.5296.1 vs. uniprot
Match: A0A6A6DVE8_9PEZI (Putative WD-repeat protein n=1 Tax=Zopfia rhizophila CBS 207.26 TaxID=1314779 RepID=A0A6A6DVE8_9PEZI) HSP 1 Score: 51.2 bits (121), Expect = 2.310e-6 Identity = 26/37 (70.27%), Postives = 29/37 (78.38%), Query Frame = 1
Query: 4 EGHSGPVYAVSFHPEGKLVASAGFDGKVRLNDAATGA 114
EGHS V+AV F P+GKLVASA FDG V+L D ATGA
Sbjct: 605 EGHSESVFAVVFSPDGKLVASASFDGTVKLWDVATGA 641
BLAST of mRNA_M-pyrifera_M_contig126263.5296.1 vs. uniprot
Match: A0A831X6F0_9BACT (Uncharacterized protein n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A831X6F0_9BACT) HSP 1 Score: 51.2 bits (121), Expect = 2.320e-6 Identity = 24/36 (66.67%), Postives = 28/36 (77.78%), Query Frame = 1
Query: 4 EGHSGPVYAVSFHPEGKLVASAGFDGKVRLNDAATG 111
EG GP+YAV FH GK+VA GF+G VRL+DAATG
Sbjct: 556 EGDLGPIYAVDFHMNGKVVAVGGFNGVVRLHDAATG 591
BLAST of mRNA_M-pyrifera_M_contig126263.5296.1 vs. uniprot
Match: A0A2G2JKY6_9BACT (Cytochrome c domain-containing protein n=1 Tax=Blastopirellula sp. TaxID=2024826 RepID=A0A2G2JKY6_9BACT) HSP 1 Score: 50.8 bits (120), Expect = 3.180e-6 Identity = 22/36 (61.11%), Postives = 26/36 (72.22%), Query Frame = 1
Query: 4 EGHSGPVYAVSFHPEGKLVASAGFDGKVRLNDAATG 111
EGH PVY+V+F P GK +AS GFDG V +ND TG
Sbjct: 414 EGHQEPVYSVTFSPNGKQIASVGFDGLVHINDTTTG 449
BLAST of mRNA_M-pyrifera_M_contig126263.5296.1 vs. uniprot
Match: A0A2Z3HK77_9BACT (Uncharacterized protein n=2 Tax=Gemmata obscuriglobus TaxID=114 RepID=A0A2Z3HK77_9BACT) HSP 1 Score: 50.1 bits (118), Expect = 5.950e-6 Identity = 23/37 (62.16%), Postives = 29/37 (78.38%), Query Frame = 1
Query: 1 CEGHSGPVYAVSFHPEGKLVASAGFDGKVRLNDAATG 111
CE +GPVY V++ P+GK +ASAGFDG V L+D ATG
Sbjct: 431 CEKVTGPVYTVAWQPDGKRIASAGFDGTVWLHDPATG 467
BLAST of mRNA_M-pyrifera_M_contig126263.5296.1 vs. uniprot
Match: A0A8H6NK73_9PEZI (Vegetative incompatibility protein het-e-1 n=1 Tax=Colletotrichum plurivorum TaxID=2175906 RepID=A0A8H6NK73_9PEZI) HSP 1 Score: 49.7 bits (117), Expect = 6.890e-6 Identity = 24/36 (66.67%), Postives = 29/36 (80.56%), Query Frame = 1
Query: 4 EGHSGPVYAVSFHPEGKLVASAGFDGKVRLNDAATG 111
EGH+ PVYAV+F P+G++VASA D VRL DAATG
Sbjct: 53 EGHTSPVYAVAFSPDGQVVASASEDNTVRLWDAATG 88
BLAST of mRNA_M-pyrifera_M_contig126263.5296.1 vs. uniprot
Match: A0A1W5D8I0_9LECA (WD40/YVTN repeat-like-containing domain n=1 Tax=Lasallia pustulata TaxID=136370 RepID=A0A1W5D8I0_9LECA) HSP 1 Score: 49.7 bits (117), Expect = 8.090e-6 Identity = 25/37 (67.57%), Postives = 28/37 (75.68%), Query Frame = 1
Query: 4 EGHSGPVYAVSFHPEGKLVASAGFDGKVRLNDAATGA 114
EGHSGPVYAV+F P GK +AS D VR+ DAATGA
Sbjct: 858 EGHSGPVYAVAFSPNGKQLASGSDDKTVRIWDAATGA 894 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126263.5296.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig126263.5296.1 >prot_M-pyrifera_M_contig126263.5296.1 ID=prot_M-pyrifera_M_contig126263.5296.1|Name=mRNA_M-pyrifera_M_contig126263.5296.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=38bp CEGHSGPVYAVSFHPEGKLVASAGFDGKVRLNDAATGAback to top mRNA from alignment at M-pyrifera_M_contig126263:81..194- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig126263.5296.1 ID=mRNA_M-pyrifera_M_contig126263.5296.1|Name=mRNA_M-pyrifera_M_contig126263.5296.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=114bp|location=Sequence derived from alignment at M-pyrifera_M_contig126263:81..194- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig126263:81..194- >mRNA_M-pyrifera_M_contig126263.5296.1 ID=mRNA_M-pyrifera_M_contig126263.5296.1|Name=mRNA_M-pyrifera_M_contig126263.5296.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=228bp|location=Sequence derived from alignment at M-pyrifera_M_contig126263:81..194- (Macrocystis pyrifera P11B4 male)back to top |