mRNA_M-pyrifera_M_contig126178.5281.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig126178.5281.1 vs. uniprot
Match: A0A831ZKL0_9GAMM (Cupin domain-containing protein n=1 Tax=Crenotrichaceae bacterium TaxID=2268193 RepID=A0A831ZKL0_9GAMM) HSP 1 Score: 90.1 bits (222), Expect = 3.850e-21 Identity = 40/71 (56.34%), Postives = 54/71 (76.06%), Query Frame = 1
Query: 4 SGTEAFLLRAEPGARLPPHSHDHDEHCLVLEGDVGYGETIRLGSGDYHLARRGSEHAVAHTETGALVYIQN 216
SG E++LLR E GA+ P H H HDE CLVLEG+V + E + L +GDYH A +GS H VAH++TGAL+++Q+
Sbjct: 85 SGVESYLLRVEAGAQAPAHEHLHDELCLVLEGEVCF-EDVHLKTGDYHFAPKGSVHGVAHSKTGALLFLQS 154
BLAST of mRNA_M-pyrifera_M_contig126178.5281.1 vs. uniprot
Match: A0A2A5G6D9_9GAMM (Cupin_7 domain-containing protein n=1 Tax=Thiotrichaceae bacterium TaxID=2030882 RepID=A0A2A5G6D9_9GAMM) HSP 1 Score: 85.5 bits (210), Expect = 3.080e-19 Identity = 39/71 (54.93%), Postives = 53/71 (74.65%), Query Frame = 1
Query: 1 ESGTEAFLLRAEPGARLPPHSHDHDEHCLVLEGDVGYGETIRLGSGDYHLARRGSEHAVAHTETGALVYIQ 213
++G E +LL+ E GA+ PH H DEHC+VLEGDV +G+ I L +GDYHLA +GS+H A++ GAL+YIQ
Sbjct: 89 DNGIETYLLKIEAGAKDAPHIHTTDEHCIVLEGDVCFGD-IHLNAGDYHLAPKGSKHDEAYSIHGALLYIQ 158
BLAST of mRNA_M-pyrifera_M_contig126178.5281.1 vs. uniprot
Match: A0A5C7PR58_9BURK (Cupin domain-containing protein n=1 Tax=Burkholderiaceae bacterium TaxID=2030806 RepID=A0A5C7PR58_9BURK) HSP 1 Score: 84.7 bits (208), Expect = 1.110e-18 Identity = 37/69 (53.62%), Postives = 47/69 (68.12%), Query Frame = 1
Query: 7 GTEAFLLRAEPGARLPPHSHDHDEHCLVLEGDVGYGETIRLGSGDYHLARRGSEHAVAHTETGALVYIQ 213
G ++LLR EPGARLPPH H HDE C+VLEG + G + LG G YHLA RG+ HA + GA V+++
Sbjct: 110 GVMSYLLRFEPGARLPPHRHPHDEECIVLEGRLRVGTRLELGPGGYHLAHRGALHAGIGSPQGATVFLR 178
BLAST of mRNA_M-pyrifera_M_contig126178.5281.1 vs. uniprot
Match: A0A259DCF7_9PROT (Cupin_7 domain-containing protein n=4 Tax=unclassified Hydrogenophilales TaxID=1798413 RepID=A0A259DCF7_9PROT) HSP 1 Score: 73.2 bits (178), Expect = 1.540e-14 Identity = 35/71 (49.30%), Postives = 45/71 (63.38%), Query Frame = 1
Query: 1 ESGTEAFLLRAEPGARLPPHSHDHDEHCLVLEGDVGYGETIRLGSGDYHLARRGSEHAVAHTETGALVYIQ 213
++ T +FLLR EPG+RLPPH H DE LVLEGD + +GDYHLA G H TE+G L++I+
Sbjct: 79 DAQTRSFLLRMEPGSRLPPHDHALDEEALVLEGDATINGVL-CHAGDYHLAPHGKPHDWLTTESGCLLFIR 148
BLAST of mRNA_M-pyrifera_M_contig126178.5281.1 vs. uniprot
Match: A0A656HJM9_THINJ (Cupin_7 domain-containing protein n=1 Tax=Thiothrix nivea (strain ATCC 35100 / DSM 5205 / JP2) TaxID=870187 RepID=A0A656HJM9_THINJ) HSP 1 Score: 72.0 bits (175), Expect = 4.620e-14 Identity = 30/70 (42.86%), Postives = 45/70 (64.29%), Query Frame = 1
Query: 4 SGTEAFLLRAEPGARLPPHSHDHDEHCLVLEGDVGYGETIRLGSGDYHLARRGSEHAVAHTETGALVYIQ 213
SG +L R +PG +P H H DE C++LEG++ +G+ + L +GDYH A +G H TETGAL +++
Sbjct: 86 SGLLTYLARLDPGFEMPGHPHPFDEECIMLEGELWFGD-LHLKAGDYHFAAKGVYHGKLRTETGALAFLK 154
BLAST of mRNA_M-pyrifera_M_contig126178.5281.1 vs. uniprot
Match: A0A091APK1_9GAMM (Cupin_7 domain-containing protein n=1 Tax=Arenimonas oryziterrae DSM 21050 = YC6267 TaxID=1121015 RepID=A0A091APK1_9GAMM) HSP 1 Score: 71.2 bits (173), Expect = 8.260e-14 Identity = 35/79 (44.30%), Postives = 46/79 (58.23%), Query Frame = 1
Query: 1 ESGTEAFLLRAEPGARLPPHSHDHDEHCLVLEGDVGYGETIRLGSGDYHLARRGSEHAVAHTETGALVYIQNVRIPPGA 237
++ T+ L R +PG R+PPH H H+E CLVLEG + + + + SGDY LAR G H V GAL I+ IP A
Sbjct: 70 DAQTQTTLWRVQPGGRVPPHVHAHEEECLVLEGRIVH-DGVSYFSGDYLLARAGESHRVFEAPEGALFLIRGEPIPDPA 147
BLAST of mRNA_M-pyrifera_M_contig126178.5281.1 vs. uniprot
Match: A0A1G0I0T4_9GAMM (Cupin_7 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_22 TaxID=1798290 RepID=A0A1G0I0T4_9GAMM) HSP 1 Score: 70.9 bits (172), Expect = 1.190e-13 Identity = 34/76 (44.74%), Postives = 44/76 (57.89%), Query Frame = 1
Query: 1 ESGTEAFLLRAEPGARLPPHSHDHDEHCLVLEGDVGYGETIRLGSGDYHLARRGSEHAVAHTETGALVYIQNVRIP 228
E GT+ L R +PGAR+PPH H H+E CLV+EG + I GDY LA G +HA + GAL I+ +P
Sbjct: 72 EKGTQTTLWRVDPGARVPPHPHSHEEECLVIEGSI-IQNGIEYLPGDYLLADAGEKHAPFDSPRGALFLIRGELVP 146
BLAST of mRNA_M-pyrifera_M_contig126178.5281.1 vs. uniprot
Match: UPI0006888A1C (cupin domain-containing protein n=1 Tax=Thiothrix TaxID=1030 RepID=UPI0006888A1C) HSP 1 Score: 70.9 bits (172), Expect = 1.300e-13 Identity = 29/71 (40.85%), Postives = 45/71 (63.38%), Query Frame = 1
Query: 1 ESGTEAFLLRAEPGARLPPHSHDHDEHCLVLEGDVGYGETIRLGSGDYHLARRGSEHAVAHTETGALVYIQ 213
+SG +L + PG +P H H DE C++LEG++ +G+ + L +GDYH A +G H TETGAL +++
Sbjct: 85 DSGLLTYLAKLSPGFEMPGHPHPFDEECIMLEGELWFGD-LHLKAGDYHFASKGVHHGRLKTETGALAFLK 154
BLAST of mRNA_M-pyrifera_M_contig126178.5281.1 vs. uniprot
Match: A0A5C7PQV3_9BURK (Cupin_7 domain-containing protein n=1 Tax=Burkholderiaceae bacterium TaxID=2030806 RepID=A0A5C7PQV3_9BURK) HSP 1 Score: 72.4 bits (176), Expect = 2.120e-13 Identity = 31/69 (44.93%), Postives = 45/69 (65.22%), Query Frame = 1
Query: 1 ESGTEAFLLRAEPGARLPPHSHDHDEHCLVLEGDVGYGETIRLGSGDYHLARRGSEHAVAHTETGALVY 207
+ G A L RA+ GA +PPH+H HDE CL++EG++ + + L GDY LA GS H + T+TG ++Y
Sbjct: 199 QDGQAALLYRADAGAAVPPHTHGHDEECLMVEGELFLDDQL-LQRGDYQLAPTGSGHRITATDTGVVIY 266
BLAST of mRNA_M-pyrifera_M_contig126178.5281.1 vs. uniprot
Match: A0A433ACB9_HYPSQ (DUF4437 domain-containing protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A433ACB9_HYPSQ) HSP 1 Score: 70.1 bits (170), Expect = 4.000e-13 Identity = 29/70 (41.43%), Postives = 47/70 (67.14%), Query Frame = 1
Query: 1 ESGTEAFLLRAEPGARLPPHSHDHDEHCLVLEGDVGYGETIRLGSGDYHLARRGSEHAVAHTETGALVYI 210
++ ++ L+R +PGAR H HD DE CLV++GD+ +G+ + L +GD+H A +G H A + +G L+YI
Sbjct: 108 KANRQSSLIRMKPGARYQSHDHDDDEECLVIQGDLKFGDLL-LKAGDFHFAPKGRTHPSAFSPSGCLLYI 176 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126178.5281.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig126178.5281.1 >prot_M-pyrifera_M_contig126178.5281.1 ID=prot_M-pyrifera_M_contig126178.5281.1|Name=mRNA_M-pyrifera_M_contig126178.5281.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=80bp ESGTEAFLLRAEPGARLPPHSHDHDEHCLVLEGDVGYGETIRLGSGDYHLback to top mRNA from alignment at M-pyrifera_M_contig126178:3..242+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig126178.5281.1 ID=mRNA_M-pyrifera_M_contig126178.5281.1|Name=mRNA_M-pyrifera_M_contig126178.5281.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=240bp|location=Sequence derived from alignment at M-pyrifera_M_contig126178:3..242+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig126178:3..242+ >mRNA_M-pyrifera_M_contig126178.5281.1 ID=mRNA_M-pyrifera_M_contig126178.5281.1|Name=mRNA_M-pyrifera_M_contig126178.5281.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=480bp|location=Sequence derived from alignment at M-pyrifera_M_contig126178:3..242+ (Macrocystis pyrifera P11B4 male)back to top |