mRNA_M-pyrifera_M_contig126172.5280.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig126172.5280.1 vs. uniprot
Match: A0A139CZW4_9GAMM (Aspartyl-tRNA synthetase (Fragment) n=2 Tax=Marinobacter TaxID=2742 RepID=A0A139CZW4_9GAMM) HSP 1 Score: 322 bits (826), Expect = 7.570e-109 Identity = 161/169 (95.27%), Postives = 166/169 (98.22%), Query Frame = 1
Query: 1 AATPPFPLDEHVDVGEDVRLRYRFVDLRRPEMINRLRFRSRVTSYIRNYLDSNGFMDVETPILTRATPEGARDYLVPSRTHEGSFFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQPEFTQVDIEASFIDEETLMKLNEDMIRALFKDVLEVELPSFPQMP 507
AATPPFPLDEHVDVGEDVRLRYRFVDLRRPEMINRLRFRSRVTSYIRN+LDS GFMDVETPILTRATPEGARDYLVPSRTHEGSFFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQPEFTQVDIEASFIDEETLM+LNEDM+R+LFKDVLEV LP FP+MP
Sbjct: 111 AATPPFPLDEHVDVGEDVRLRYRFVDLRRPEMINRLRFRSRVTSYIRNFLDSRGFMDVETPILTRATPEGARDYLVPSRTHEGSFFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQPEFTQVDIEASFIDEETLMELNEDMVRSLFKDVLEVSLPEFPRMP 279
BLAST of mRNA_M-pyrifera_M_contig126172.5280.1 vs. uniprot
Match: A0A142FWH0_9GAMM (Aspartate--tRNA(Asp/Asn) ligase n=18 Tax=Marinobacter TaxID=2742 RepID=A0A142FWH0_9GAMM) HSP 1 Score: 323 bits (827), Expect = 1.510e-105 Identity = 161/169 (95.27%), Postives = 166/169 (98.22%), Query Frame = 1
Query: 1 AATPPFPLDEHVDVGEDVRLRYRFVDLRRPEMINRLRFRSRVTSYIRNYLDSNGFMDVETPILTRATPEGARDYLVPSRTHEGSFFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQPEFTQVDIEASFIDEETLMKLNEDMIRALFKDVLEVELPSFPQMP 507
AATPPFPLDEHVDVGEDVRLRYRF+DLRRPEMINRLRFRSRVTSYIRN+LDS GFMDVETPILTRATPEGARDYLVPSRTHEGSFFALPQSPQLFKQ+LMVSGVDRYYQIAKCFRDEDLRADRQPEFTQVDIEASFIDEETLM LNEDMIRALFKDVL+VELP FP+MP
Sbjct: 105 AATPPFPLDEHVDVGEDVRLRYRFIDLRRPEMINRLRFRSRVTSYIRNFLDSRGFMDVETPILTRATPEGARDYLVPSRTHEGSFFALPQSPQLFKQMLMVSGVDRYYQIAKCFRDEDLRADRQPEFTQVDIEASFIDEETLMTLNEDMIRALFKDVLDVELPEFPRMP 273
BLAST of mRNA_M-pyrifera_M_contig126172.5280.1 vs. uniprot
Match: SYDND_MARN8 (Aspartate--tRNA(Asp/Asn) ligase n=82 Tax=Marinobacteraceae TaxID=2887365 RepID=SYDND_MARN8) HSP 1 Score: 321 bits (822), Expect = 8.490e-105 Identity = 161/169 (95.27%), Postives = 166/169 (98.22%), Query Frame = 1
Query: 1 AATPPFPLDEHVDVGEDVRLRYRFVDLRRPEMINRLRFRSRVTSYIRNYLDSNGFMDVETPILTRATPEGARDYLVPSRTHEGSFFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQPEFTQVDIEASFIDEETLMKLNEDMIRALFKDVLEVELPSFPQMP 507
AATPPFPLDEHVDVGEDVRLRYRFVDLRRPEMINRLRFRSRVTSYIRN+LDS GFMDVETPILTRATPEGARDYLVPSRTHEGSFFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQPEFTQVDIEASFIDEETLM LNE+MIR+LFKDVL+VELP FP+MP
Sbjct: 105 AATPPFPLDEHVDVGEDVRLRYRFVDLRRPEMINRLRFRSRVTSYIRNFLDSRGFMDVETPILTRATPEGARDYLVPSRTHEGSFFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQPEFTQVDIEASFIDEETLMGLNEEMIRSLFKDVLDVELPEFPRMP 273
BLAST of mRNA_M-pyrifera_M_contig126172.5280.1 vs. uniprot
Match: A0A2V3ZJT6_9GAMM (Aspartate--tRNA(Asp/Asn) ligase n=2 Tax=Marinobacter TaxID=2742 RepID=A0A2V3ZJT6_9GAMM) HSP 1 Score: 321 bits (822), Expect = 8.950e-105 Identity = 159/169 (94.08%), Postives = 166/169 (98.22%), Query Frame = 1
Query: 1 AATPPFPLDEHVDVGEDVRLRYRFVDLRRPEMINRLRFRSRVTSYIRNYLDSNGFMDVETPILTRATPEGARDYLVPSRTHEGSFFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQPEFTQVDIEASFIDEETLMKLNEDMIRALFKDVLEVELPSFPQMP 507
AATPPFPLDEHVDVGEDVRL+YRFVDLRRPEM+NRLRFRSRVTSYIRN+LDSNGFMDVETPILTRATPEGARDYLVPSRTHEGSFFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQPEFTQVD+EASFIDEETLM LNE MIR+LFKDVLEV+LP FP+MP
Sbjct: 105 AATPPFPLDEHVDVGEDVRLKYRFVDLRRPEMLNRLRFRSRVTSYIRNFLDSNGFMDVETPILTRATPEGARDYLVPSRTHEGSFFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQPEFTQVDVEASFIDEETLMSLNESMIRSLFKDVLEVDLPKFPRMP 273
BLAST of mRNA_M-pyrifera_M_contig126172.5280.1 vs. uniprot
Match: A0A1S2CGK9_9GAMM (Aspartate--tRNA(Asp/Asn) ligase n=12 Tax=Marinobacter TaxID=2742 RepID=A0A1S2CGK9_9GAMM) HSP 1 Score: 318 bits (814), Expect = 1.420e-103 Identity = 157/169 (92.90%), Postives = 165/169 (97.63%), Query Frame = 1
Query: 1 AATPPFPLDEHVDVGEDVRLRYRFVDLRRPEMINRLRFRSRVTSYIRNYLDSNGFMDVETPILTRATPEGARDYLVPSRTHEGSFFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQPEFTQVDIEASFIDEETLMKLNEDMIRALFKDVLEVELPSFPQMP 507
AATPPFPLDEHVDVGEDVRLRYRF+DLRRPEM+NRLRFRSRVTSYIRN+LDSNGFMDVETPILTRATPEGARDYLVPSRTHEGSFFALPQSPQLFKQ+LMVSGVDRYYQIAKCFRDEDLRADRQPEFTQVDIEASF+DEE LM LNE MIRALFKDV+ VELP+FP+MP
Sbjct: 105 AATPPFPLDEHVDVGEDVRLRYRFIDLRRPEMLNRLRFRSRVTSYIRNHLDSNGFMDVETPILTRATPEGARDYLVPSRTHEGSFFALPQSPQLFKQMLMVSGVDRYYQIAKCFRDEDLRADRQPEFTQVDIEASFVDEEDLMNLNEGMIRALFKDVMNVELPAFPRMP 273
BLAST of mRNA_M-pyrifera_M_contig126172.5280.1 vs. uniprot
Match: A0A4U6R1E4_9GAMM (Aspartate--tRNA(Asp/Asn) ligase n=3 Tax=Marinobacter TaxID=2742 RepID=A0A4U6R1E4_9GAMM) HSP 1 Score: 317 bits (813), Expect = 2.010e-103 Identity = 156/169 (92.31%), Postives = 165/169 (97.63%), Query Frame = 1
Query: 1 AATPPFPLDEHVDVGEDVRLRYRFVDLRRPEMINRLRFRSRVTSYIRNYLDSNGFMDVETPILTRATPEGARDYLVPSRTHEGSFFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQPEFTQVDIEASFIDEETLMKLNEDMIRALFKDVLEVELPSFPQMP 507
AATPPFPLDEHVDVGEDVRL+YR+VDLRRPEM+NRLRFRSRVTSYIRN+LD NGFMDVETPILTRATPEGARDYLVPSRTHEG+FFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQPEFTQ+D+EASFIDEETLM LNE MIR+LFKDVLEVELP FP+MP
Sbjct: 105 AATPPFPLDEHVDVGEDVRLKYRYVDLRRPEMLNRLRFRSRVTSYIRNFLDGNGFMDVETPILTRATPEGARDYLVPSRTHEGAFFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQPEFTQIDVEASFIDEETLMTLNESMIRSLFKDVLEVELPEFPRMP 273
BLAST of mRNA_M-pyrifera_M_contig126172.5280.1 vs. uniprot
Match: A0A0H4I538_9GAMM (Aspartate--tRNA(Asp/Asn) ligase n=12 Tax=root TaxID=1 RepID=A0A0H4I538_9GAMM) HSP 1 Score: 317 bits (812), Expect = 3.600e-103 Identity = 154/169 (91.12%), Postives = 165/169 (97.63%), Query Frame = 1
Query: 1 AATPPFPLDEHVDVGEDVRLRYRFVDLRRPEMINRLRFRSRVTSYIRNYLDSNGFMDVETPILTRATPEGARDYLVPSRTHEGSFFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQPEFTQVDIEASFIDEETLMKLNEDMIRALFKDVLEVELPSFPQMP 507
AATPPFPLDEHVDVGEDVRLRYRF+DLRRPEM+NRLRFRSRVTSYIRNYLDSNGFMDVETPILTRATPEGARDYLVPSRTHEGSFFALPQSPQLFKQ+LMVSG+DRYYQIAKCFRDEDLRADRQPEFTQ+D+EASF++EE LM LNE MIRALFKDV++VELP FP+MP
Sbjct: 105 AATPPFPLDEHVDVGEDVRLRYRFIDLRRPEMLNRLRFRSRVTSYIRNYLDSNGFMDVETPILTRATPEGARDYLVPSRTHEGSFFALPQSPQLFKQMLMVSGIDRYYQIAKCFRDEDLRADRQPEFTQIDVEASFVNEEDLMNLNEGMIRALFKDVMQVELPDFPRMP 273
BLAST of mRNA_M-pyrifera_M_contig126172.5280.1 vs. uniprot
Match: A0A1V2DX93_9GAMM (Aspartate--tRNA(Asp/Asn) ligase n=9 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1V2DX93_9GAMM) HSP 1 Score: 315 bits (806), Expect = 2.200e-102 Identity = 156/169 (92.31%), Postives = 166/169 (98.22%), Query Frame = 1
Query: 1 AATPPFPLDEHVDVGEDVRLRYRFVDLRRPEMINRLRFRSRVTSYIRNYLDSNGFMDVETPILTRATPEGARDYLVPSRTHEGSFFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQPEFTQVDIEASFIDEETLMKLNEDMIRALFKDVLEVELPSFPQMP 507
+ATPPFPLDE+VDVGEDVRLRYRFVDLRRPEMINRLRFRSRVTSYIRN+LDS GFMDVETPILTRATPEGARDYLVPSRTHEG+FFALPQSPQLFKQLLMV+GVDRYYQIAKCFRDEDLRADRQPEFTQVDIEASFIDE+TLM+LNEDMIR+LF+DVL VELP FP+MP
Sbjct: 105 SATPPFPLDEYVDVGEDVRLRYRFVDLRRPEMINRLRFRSRVTSYIRNFLDSRGFMDVETPILTRATPEGARDYLVPSRTHEGAFFALPQSPQLFKQLLMVAGVDRYYQIAKCFRDEDLRADRQPEFTQVDIEASFIDEQTLMQLNEDMIRSLFRDVLSVELPEFPRMP 273
BLAST of mRNA_M-pyrifera_M_contig126172.5280.1 vs. uniprot
Match: UPI001D06F014 (aspartate--tRNA ligase n=2 Tax=Marinobacter TaxID=2742 RepID=UPI001D06F014) HSP 1 Score: 308 bits (788), Expect = 1.160e-99 Identity = 151/169 (89.35%), Postives = 161/169 (95.27%), Query Frame = 1
Query: 1 AATPPFPLDEHVDVGEDVRLRYRFVDLRRPEMINRLRFRSRVTSYIRNYLDSNGFMDVETPILTRATPEGARDYLVPSRTHEGSFFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQPEFTQVDIEASFIDEETLMKLNEDMIRALFKDVLEVELPSFPQMP 507
AATPPFPLDEHVDVGEDVRLRYRFVDLRRPEM+NRLRFRSRVTSYIRN+LDSN FMDVETPILTRATPEGARDYLVPSRTH GSFFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQPEFTQ+D+EASFIDEE LM + E M+R LFKDV+++ELP FP+MP
Sbjct: 105 AATPPFPLDEHVDVGEDVRLRYRFVDLRRPEMLNRLRFRSRVTSYIRNFLDSNDFMDVETPILTRATPEGARDYLVPSRTHNGSFFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQPEFTQIDLEASFIDEEGLMGITESMVRKLFKDVMDIELPEFPRMP 273
BLAST of mRNA_M-pyrifera_M_contig126172.5280.1 vs. uniprot
Match: A0A1I6H1B9_9GAMM (Aspartate--tRNA(Asp/Asn) ligase n=4 Tax=Marinobacter TaxID=2742 RepID=A0A1I6H1B9_9GAMM) HSP 1 Score: 306 bits (784), Expect = 4.400e-99 Identity = 152/169 (89.94%), Postives = 161/169 (95.27%), Query Frame = 1
Query: 1 AATPPFPLDEHVDVGEDVRLRYRFVDLRRPEMINRLRFRSRVTSYIRNYLDSNGFMDVETPILTRATPEGARDYLVPSRTHEGSFFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQPEFTQVDIEASFIDEETLMKLNEDMIRALFKDVLEVELPSFPQMP 507
AATPPFPLDEHVDVGEDVRLRYRFVDLRRPEM+NRLRFRSRVTSY+RN+LD NGFMDVETPILTRATPEGARDYLVPSRTHEGSFFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQPEFTQVDIEASF++EE LM + E M+R LFKDVL+VEL FP+MP
Sbjct: 105 AATPPFPLDEHVDVGEDVRLRYRFVDLRRPEMLNRLRFRSRVTSYLRNFLDGNGFMDVETPILTRATPEGARDYLVPSRTHEGSFFALPQSPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQPEFTQVDIEASFVNEEDLMGMTETMVRNLFKDVLDVELAPFPRMP 273 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126172.5280.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig126172.5280.1 >prot_M-pyrifera_M_contig126172.5280.1 ID=prot_M-pyrifera_M_contig126172.5280.1|Name=mRNA_M-pyrifera_M_contig126172.5280.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=169bp AATPPFPLDEHVDVGEDVRLRYRFVDLRRPEMINRLRFRSRVTSYIRNYLback to top mRNA from alignment at M-pyrifera_M_contig126172:3..509+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig126172.5280.1 ID=mRNA_M-pyrifera_M_contig126172.5280.1|Name=mRNA_M-pyrifera_M_contig126172.5280.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=507bp|location=Sequence derived from alignment at M-pyrifera_M_contig126172:3..509+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig126172:3..509+ >mRNA_M-pyrifera_M_contig126172.5280.1 ID=mRNA_M-pyrifera_M_contig126172.5280.1|Name=mRNA_M-pyrifera_M_contig126172.5280.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1014bp|location=Sequence derived from alignment at M-pyrifera_M_contig126172:3..509+ (Macrocystis pyrifera P11B4 male)back to top |