mRNA_M-pyrifera_M_contig126169.5278.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig126169.5278.1 vs. uniprot
Match: A0A2B4SWW0_STYPI (Integrator complex subunit 6 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SWW0_STYPI) HSP 1 Score: 99.8 bits (247), Expect = 1.400e-22 Identity = 42/80 (52.50%), Postives = 60/80 (75.00%), Query Frame = 1
Query: 1 DEFVNVLKFNPTPKWRNEFEQYLATLPFYYMKPLKNALKRFGIAMALIPDHFESELPFTIQAYLKKLKEQSKVEADRMLA 240
DE V VLK PTPKW+ +FE YL+T+P YY PL+NA +R GI + +PDH +S L +T+ YLKK+K+QSK+E +R+++
Sbjct: 482 DELVKVLKMKPTPKWKEKFESYLSTMPNYYAGPLRNAFRRMGIPPSFVPDHLDSFLSYTVVNYLKKVKQQSKMETERLIS 561
BLAST of mRNA_M-pyrifera_M_contig126169.5278.1 vs. uniprot
Match: A0A3M6T659_POCDA (VWFA domain-containing protein n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6T659_POCDA) HSP 1 Score: 99.8 bits (247), Expect = 1.420e-22 Identity = 42/80 (52.50%), Postives = 60/80 (75.00%), Query Frame = 1
Query: 1 DEFVNVLKFNPTPKWRNEFEQYLATLPFYYMKPLKNALKRFGIAMALIPDHFESELPFTIQAYLKKLKEQSKVEADRMLA 240
DE V VLK PTPKW+ +FE YL+T+P YY PL+NA +R GI + +PDH +S L +T+ YLKK+K+QSK+E +R+++
Sbjct: 463 DELVKVLKMKPTPKWKEKFENYLSTMPNYYAGPLRNAFRRMGIPPSFVPDHLDSFLSYTVVNYLKKVKQQSKMETERLIS 542
BLAST of mRNA_M-pyrifera_M_contig126169.5278.1 vs. uniprot
Match: UPI0009E63ABA (integrator complex subunit 6-A-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E63ABA) HSP 1 Score: 95.1 bits (235), Expect = 5.940e-21 Identity = 41/80 (51.25%), Postives = 58/80 (72.50%), Query Frame = 1
Query: 1 DEFVNVLKFNPTPKWRNEFEQYLATLPFYYMKPLKNALKRFGIAMALIPDHFESELPFTIQAYLKKLKEQSKVEADRMLA 240
DE V V K PT KW+ +FE YL+T+P YY PL+NA +R GI ++PDH +S L +T+ YLKK+K+QSK+E DR+++
Sbjct: 489 DELVKVHKMKPTAKWKEKFESYLSTMPNYYAGPLRNAFRRMGIPPNIVPDHLDSFLSYTVVNYLKKVKQQSKMETDRLIS 568
BLAST of mRNA_M-pyrifera_M_contig126169.5278.1 vs. uniprot
Match: A7SQG0_NEMVE (Predicted protein (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SQG0_NEMVE) HSP 1 Score: 93.2 bits (230), Expect = 2.760e-20 Identity = 42/84 (50.00%), Postives = 55/84 (65.48%), Query Frame = 1
Query: 1 DEFVNVLKFNPTPKWRNEFEQYLATLPFYYMKPLKNALKRFGIAMALIPDHFESELPFTIQAYLKKLKEQSKVEADRMLAAMLQ 252
DE V V K P P+W+ FE YL P YY PL+NA KR G+ ++LIPDH + L TI YLKK+K+Q K+EA+RM+ + Q
Sbjct: 408 DELVKVHKMKPVPRWKQAFEAYLDATPCYYAGPLRNAFKRMGLPISLIPDHIDGSLSATILNYLKKIKQQGKIEAERMVVLVTQ 491
BLAST of mRNA_M-pyrifera_M_contig126169.5278.1 vs. uniprot
Match: UPI00138FE9C1 (integrator complex subunit 6 isoform X3 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FE9C1) HSP 1 Score: 93.2 bits (230), Expect = 2.800e-20 Identity = 42/84 (50.00%), Postives = 55/84 (65.48%), Query Frame = 1
Query: 1 DEFVNVLKFNPTPKWRNEFEQYLATLPFYYMKPLKNALKRFGIAMALIPDHFESELPFTIQAYLKKLKEQSKVEADRMLAAMLQ 252
DE V V K P P+W+ FE YL P YY PL+NA KR G+ ++LIPDH + L TI YLKK+K+Q K+EA+RM+ + Q
Sbjct: 334 DELVKVHKMKPVPRWKQAFEAYLDATPCYYAGPLRNAFKRMGLPISLIPDHIDGSLSATILNYLKKIKQQGKIEAERMVVLVTQ 417
BLAST of mRNA_M-pyrifera_M_contig126169.5278.1 vs. uniprot
Match: UPI00139022A0 (integrator complex subunit 6 isoform X1 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00139022A0) HSP 1 Score: 93.2 bits (230), Expect = 2.810e-20 Identity = 42/84 (50.00%), Postives = 55/84 (65.48%), Query Frame = 1
Query: 1 DEFVNVLKFNPTPKWRNEFEQYLATLPFYYMKPLKNALKRFGIAMALIPDHFESELPFTIQAYLKKLKEQSKVEADRMLAAMLQ 252
DE V V K P P+W+ FE YL P YY PL+NA KR G+ ++LIPDH + L TI YLKK+K+Q K+EA+RM+ + Q
Sbjct: 495 DELVKVHKMKPVPRWKQAFEAYLDATPCYYAGPLRNAFKRMGLPISLIPDHIDGSLSATILNYLKKIKQQGKIEAERMVVLVTQ 578
BLAST of mRNA_M-pyrifera_M_contig126169.5278.1 vs. uniprot
Match: UPI001F04BFC1 (integrator complex subunit 6-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04BFC1) HSP 1 Score: 92.4 bits (228), Expect = 5.240e-20 Identity = 47/85 (55.29%), Postives = 63/85 (74.12%), Query Frame = 1
Query: 1 DEFVNVLKFNPTPKWRNEFEQYLATLPFYYMKPLKNALKRFGIAM-ALIPDHFESE--LPFTIQAYLKKLKEQSKVEADRMLAAM 246
DE VLK +PTPKWR F++YL+ LP YY+ PL+ AL+R G + LIPDH ES L +IQ+YLKKLK+Q+KVEAD++L+ +
Sbjct: 444 DELFKVLKLSPTPKWRQLFDKYLSDLPSYYIVPLRTALRRMGANVNLLIPDHVESSSSLSNSIQSYLKKLKQQAKVEADKVLSGI 528
BLAST of mRNA_M-pyrifera_M_contig126169.5278.1 vs. uniprot
Match: UPI001CF4FF6D (integrator complex subunit 6-like n=2 Tax=Acropora TaxID=6127 RepID=UPI001CF4FF6D) HSP 1 Score: 91.3 bits (225), Expect = 1.330e-19 Identity = 39/80 (48.75%), Postives = 57/80 (71.25%), Query Frame = 1
Query: 1 DEFVNVLKFNPTPKWRNEFEQYLATLPFYYMKPLKNALKRFGIAMALIPDHFESELPFTIQAYLKKLKEQSKVEADRMLA 240
DE V V K PT W+ +F+ YL+T+P YY PL+NA +R GI A +PDH +S L +T+ YLKK+K+QSK+E +R+++
Sbjct: 483 DELVKVHKMKPTLAWKEKFDNYLSTMPNYYAGPLRNAFRRMGIPSAFVPDHLDSFLSYTVVNYLKKVKQQSKMETERLIS 562
BLAST of mRNA_M-pyrifera_M_contig126169.5278.1 vs. uniprot
Match: A0A7S4HUR9_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HUR9_9EUKA) HSP 1 Score: 88.6 bits (218), Expect = 1.170e-18 Identity = 40/82 (48.78%), Postives = 58/82 (70.73%), Query Frame = 1
Query: 1 DEFVNVLKFNPTPKWRNEFEQYLATLPFYYMKPLKNALKRFGIAMALIPDHFESELPFTIQAYLKKLKEQSKVEADRMLAAM 246
D+ +N++K P+ KWR EFE Y+ ++PFYY +PL ALKRFGI ++PDH + LP ++ LK LK+ SK E++R LAA+
Sbjct: 409 DDLLNMMKV-PSAKWRQEFEAYMNSIPFYYSQPLSKALKRFGITNNIVPDHLDGSLPTSVVTKLKHLKQMSKKESNRWLAAI 489
BLAST of mRNA_M-pyrifera_M_contig126169.5278.1 vs. uniprot
Match: C3ZE67_BRAFL (VWFA domain-containing protein (Fragment) n=6 Tax=Branchiostoma TaxID=7737 RepID=C3ZE67_BRAFL) HSP 1 Score: 86.7 bits (213), Expect = 5.570e-18 Identity = 41/82 (50.00%), Postives = 58/82 (70.73%), Query Frame = 1
Query: 1 DEFVNVLKFNPTPKWRNEFEQYLATLPFYYMKPLKNALKRFGIAMALIPDHFESELPFTIQAYLKKLKEQSKVEADRMLAAM 246
DE V K P KWR F+ YL ++P YYM PLK AL+R G A LIPDH + L +++ +YLKKLK+Q+K+E+DR++A++
Sbjct: 403 DELFKVHKLKPNAKWRTAFDNYLKSMPSYYMGPLKAALRRMG-APQLIPDHLDMCLSYSVISYLKKLKQQAKLESDRIIASV 483 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126169.5278.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig126169.5278.1 >prot_M-pyrifera_M_contig126169.5278.1 ID=prot_M-pyrifera_M_contig126169.5278.1|Name=mRNA_M-pyrifera_M_contig126169.5278.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=84bp DEFVNVLKFNPTPKWRNEFEQYLATLPFYYMKPLKNALKRFGIAMALIPDback to top mRNA from alignment at M-pyrifera_M_contig126169:97..348+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig126169.5278.1 ID=mRNA_M-pyrifera_M_contig126169.5278.1|Name=mRNA_M-pyrifera_M_contig126169.5278.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=252bp|location=Sequence derived from alignment at M-pyrifera_M_contig126169:97..348+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig126169:97..348+ >mRNA_M-pyrifera_M_contig126169.5278.1 ID=mRNA_M-pyrifera_M_contig126169.5278.1|Name=mRNA_M-pyrifera_M_contig126169.5278.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=504bp|location=Sequence derived from alignment at M-pyrifera_M_contig126169:97..348+ (Macrocystis pyrifera P11B4 male)back to top |