mRNA_M-pyrifera_M_contig126054.5261.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig126054.5261.1 vs. uniprot
Match: A0A7D5MKQ4_9BACT (DEAD/DEAH box helicase family protein n=1 Tax=Cyclobacteriaceae bacterium TaxID=2099675 RepID=A0A7D5MKQ4_9BACT) HSP 1 Score: 100 bits (248), Expect = 1.660e-21 Identity = 59/163 (36.20%), Postives = 90/163 (55.21%), Query Frame = 1
Query: 1 LEGNRSSDYQKAEIFNNALDQVDTQQVRVESLSDAIVLSLNQFNNIDESFIYGALDISYQDLVHLAIKEDLLYLEKKGLRWQLVTKSEFTSGHIQSKLDAL---------NSFPEQFNEYYEVHKNLLFEHKPEWISFDLLDINLGERWIPIEIWTAFLNDFF 462
LE NR Y KA+IF ++ ++ + ESL DA++LSLN N I+ FI + S +++ ++LL+ + + + VTK EF SG+I K++A N FPE + E H L E +P ++ +L+DINLGERWIPI+I+ +F F
Sbjct: 145 LENNR---YVKADIFQXQVNNIEKTFAKPESLKDAVLLSLNAHNGINVEFIASLMQKSRDEIIREGFDQELLFRDIESQVNRYVTKDEFLSGNIVHKIEAWENLKDTGQRNQFPELTEKDIETHLERLKEVQPVFLKRELIDINLGERWIPIDIYESFAEQLF 304
BLAST of mRNA_M-pyrifera_M_contig126054.5261.1 vs. uniprot
Match: A0A3D4ISF4_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3D4ISF4_9BACT) HSP 1 Score: 99.8 bits (247), Expect = 2.200e-21 Identity = 55/155 (35.48%), Postives = 87/155 (56.13%), Query Frame = 1
Query: 25 YQKAEIFNNALDQVDTQQVRVESLSDAIVLSLNQFNNIDESFIYGALDISYQDLVHLAIKEDLLYLEKKGLRWQLVTKSEFTSGHIQSKLDAL---------NSFPEQFNEYYEVHKNLLFEHKPEWISFDLLDINLGERWIPIEIWTAFLNDFF 462
Y KA+IF+ ++ V + ESL DA++LSLN N ++ FI + S +++ ++LL+ + Q VTK EF SG+I K++A N+FPE ++ + H L E +P ++ +L+DINLGERWIPI+I+ +F F
Sbjct: 514 YVKADIFSKQVNNVQKTFAKPESLKDAVLLSLNAHNGVNVEFISSLMQKSKDEIIREGFDQELLFRNIESRASQYVTKDEFLSGNIVQKIEAWEKIKDSERRNAFPELTDKDIDTHLERLKEVQPVFLKRELIDINLGERWIPIDIYESFAEHLF 668
BLAST of mRNA_M-pyrifera_M_contig126054.5261.1 vs. uniprot
Match: A0A3D3I680_9BACT (Helicase C-terminal domain-containing protein n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3D3I680_9BACT) HSP 1 Score: 99.8 bits (247), Expect = 2.300e-21 Identity = 55/155 (35.48%), Postives = 87/155 (56.13%), Query Frame = 1
Query: 25 YQKAEIFNNALDQVDTQQVRVESLSDAIVLSLNQFNNIDESFIYGALDISYQDLVHLAIKEDLLYLEKKGLRWQLVTKSEFTSGHIQSKLDAL---------NSFPEQFNEYYEVHKNLLFEHKPEWISFDLLDINLGERWIPIEIWTAFLNDFF 462
Y KA+IF+ ++ V + ESL DA++LSLN N ++ FI + S +++ ++LL+ + Q VTK EF SG+I K++A N+FPE ++ + H L E +P ++ +L+DINLGERWIPI+I+ +F F
Sbjct: 514 YVKADIFSKQVNNVQKTFAKPESLKDAVLLSLNAHNGVNVEFISSLMQKSKDEIIREGFDQELLFRNIESRASQYVTKDEFLSGNIVQKIEAWEKIKDSERRNAFPELTDKDIDTHLERLKEVQPVFLKRELIDINLGERWIPIDIYESFAEHLF 668
BLAST of mRNA_M-pyrifera_M_contig126054.5261.1 vs. uniprot
Match: A0A7Y4R3C9_9BACT (N-6 DNA methylase n=1 Tax=Cyclobacteriaceae bacterium TaxID=2099675 RepID=A0A7Y4R3C9_9BACT) HSP 1 Score: 90.1 bits (222), Expect = 5.250e-18 Identity = 51/164 (31.10%), Postives = 92/164 (56.10%), Query Frame = 1
Query: 1 LEGNRSSDYQKAEIFNNALDQVDTQQVRVESLSDAIVLSLNQFNNIDESFIYGALDISYQDLVHLAIKEDLLYLEKKGLRWQLVTKSEFTSGHIQSKL---DALNSFPEQFNEYYEV-------HKNLLFEHKPEWISFDLLDINLGERWIPIEIWTAFLNDFF 462
LE +S Y KA+IF ++ R +SL DA+++SLN N ++ ++I + +++++ + E+L++ + VTK +F SG+I KL + L P++ N+Y ++ H L E +P ++ +L+DIN+GERWIP +I+ +F +D F
Sbjct: 508 LEKQVNSHYVKADIFTQQVNNKQAVVTRPDSLKDALLMSLNAHNGVNIAYIASLMVKEHKEVIREGLDEELIFRDLGSNPEPFVTKDKFLSGNIVQKLTIFEHLQQIPQERNKYLDLTDADIEKHLERLREVQPVFLKRELIDINIGERWIPNQIYESFASDLF 671
BLAST of mRNA_M-pyrifera_M_contig126054.5261.1 vs. uniprot
Match: A0A6N4EDK7_9RHOO (Site-specific DNA-methyltransferase (adenine-specific) n=1 Tax=Azospira oryzae TaxID=146939 RepID=A0A6N4EDK7_9RHOO) HSP 1 Score: 84.3 bits (207), Expect = 5.420e-16 Identity = 51/163 (31.29%), Postives = 88/163 (53.99%), Query Frame = 1
Query: 1 LEGNRSSDYQKAEIFNNALDQVDTQQVRVESLSDAIVLSLNQFNNIDESFIYGALDISYQDLVHLAIKEDLLYLEKKGLRWQ-LVTKSEFTSGHIQSKLDALN-------SFPEQFNEY-YEVHKNLLFEHKPEWISFDLLDINLGERWIPIEIWTAFLNDFF 462
LE + Y KA+I ++ V+ + +SL DAI+LSLN N ID +FI L+ ++ + +LL+ + + + VT+ EF SG+I K++ L S + F++ + H L E +P ++ +L+DIN+GERWIP++++ +F F
Sbjct: 505 LERLQGKSYSKADILGKQVNNVERVHEKPQSLKDAILLSLNAHNGIDMNFISSLLERDKNSVIREGLNTELLFRDPEDRAGESYVTRDEFLSGNIVRKMELLEELGTSGFSSEKSFSQSDVDHHLERLQEVRPAFLKRELIDINIGERWIPMDVYESFAEHLF 667
BLAST of mRNA_M-pyrifera_M_contig126054.5261.1 vs. uniprot
Match: A0A1H7I9U5_9SPHI (Adenine-specific DNA methylase, N12 class n=1 Tax=Olivibacter domesticus TaxID=407022 RepID=A0A1H7I9U5_9SPHI) HSP 1 Score: 74.3 bits (181), Expect = 1.670e-12 Identity = 48/160 (30.00%), Postives = 83/160 (51.88%), Query Frame = 1
Query: 1 LEGNRSSDYQKAEIFNNALDQVDTQQVRVESLSDAIVLSLNQFNNIDESFIYGALDISYQDLV-HLAIKEDLLYLEKKGLRWQLVTKSEFTSGHIQSKLDALNSFPEQFNEYYEVHKNL--LFEHKPEWISFDLLDINLGERWIPIEIWTAFLNDFFSTD 471
LE Y A+I + +V + ++++S +A+ + LN+F +D FI + + +D + HL D +Y+ RW+ T E+ SG++ KL S +Q E ++ ++ + +PE + F+LLD NLGERWIP E + +L + TD
Sbjct: 664 LERREEEKYVTADIVTTPILEVQ-EALQLDSPLEALAVCLNRFGRVDIPFIASTCNQTEEDTIEHLG---DKVYVNPATNRWE--TNDEYLSGNVVEKLSLAESVLKQHPEDIQLRRSYEAIKGSQPEKVPFELLDFNLGERWIPTEYYERYLKELLDTD 817
BLAST of mRNA_M-pyrifera_M_contig126054.5261.1 vs. uniprot
Match: A0A1I2ZJ40_9SPHI (Helicase conserved C-terminal domain-containing protein n=1 Tax=Pedobacter insulae TaxID=414048 RepID=A0A1I2ZJ40_9SPHI) HSP 1 Score: 73.6 bits (179), Expect = 3.100e-12 Identity = 48/159 (30.19%), Postives = 80/159 (50.31%), Query Frame = 1
Query: 1 LEGNRSSDYQKAEIFNNALDQVDTQQVRVESLSDAIVLSLNQFNNIDESFIYGALDISYQDLVHLAIKEDLLYLEKKGLRWQLVTKSEFTSGHIQSKLDALNSFPEQFNEYYEVHKNL--LFEHKPEWISFDLLDINLGERWIPIEIWTAFLNDFFSTD 471
LE + KA+I ++ + + V + + +A+ SLN +D FI AL+ + + + +YL W+ T EF SG++ +KL + PEQ + Y+ +++ L + +PE I F+LLD NLGERWIP+ + F + F D
Sbjct: 658 LERREGEHFVKADILIQSVQKTKERFVTTDPV-EALAHSLNDTGRVDLEFISAALETDRDEAI--TGLGNHIYLNPLSNTWE--TADEFLSGNVVAKLKQAENLPEQVLQNYQYGRSVEALRKVQPEAIPFELLDFNLGERWIPLSFYERFATELFEQD 811
BLAST of mRNA_M-pyrifera_M_contig126054.5261.1 vs. uniprot
Match: A0A1Q3S3Z3_9FLAO (DNA methylase n=1 Tax=Flavobacterium sp. 40-81 TaxID=1896169 RepID=A0A1Q3S3Z3_9FLAO) HSP 1 Score: 73.2 bits (178), Expect = 4.220e-12 Identity = 43/130 (33.08%), Postives = 72/130 (55.38%), Query Frame = 1
Query: 79 VRVESLSDAIVLSLNQFNNIDESFIYGALDISYQDLVHLAIKEDLLYLEKKGLRWQLVTKSEFTSGHIQSKLDALNSFPEQFNEYYEVHKNL--LFEHKPEWISFDLLDINLGERWIPIEIWTAFLNDFF 462
++ E +A+ SLN +D +FI A+ IS ++ + A+ ++ +YL G W+ T+ ++ SG++ KL + E +E + ++L L + +PE I FDLLD NLGERWIP + F + F
Sbjct: 685 LKTEDPLEALARSLNDLGYVDIAFISSAMGISDEESI--AVLDERIYLNPNGDIWE--TRDKYLSGNVHQKLSDVKKALEAQSENGQYKRSLDALAKIQPERIPFDLLDFNLGERWIPESYYNQFATELF 810
BLAST of mRNA_M-pyrifera_M_contig126054.5261.1 vs. uniprot
Match: A0A1G7GJE7_9SPHI (Type III restriction enzyme, res subunit n=1 Tax=Mucilaginibacter pineti TaxID=1391627 RepID=A0A1G7GJE7_9SPHI) HSP 1 Score: 72.4 bits (176), Expect = 7.820e-12 Identity = 51/160 (31.87%), Postives = 83/160 (51.88%), Query Frame = 1
Query: 1 LEGNRSSDYQKAEIFNNALDQVDTQQVRVESLSDAIVLSLNQFNNIDESFIYGALDISY-QDLVHLAIKEDLLYLEKKGLRWQLVTKSEFTSGHIQSKLDALNSFPEQFNEYYEVHKNL--LFEHKPEWISFDLLDINLGERWIPIEIWTAFLNDFFSTD 471
LE ++ Y +++IF+ L++ + R E +A+ LN +D +FI + S Q +V L D +Y RW+ TK +F SG++ +KL+ + E+ + ++L L +PE I F+LLD NLGERW+P+ + F D F TD
Sbjct: 660 LERRENNTYVQSDIFSVNLNRNELAYFRTEEPLEALAHCLNIKGYVDTAFIAEITNTSEPQAIVGLG---DHIYQNPIHNRWE--TKDQFLSGNVVAKLEQVTIIAEEQPAILQFQRSLEALAGVQPEKIPFELLDFNLGERWMPVSYFERFAKDLFETD 814
BLAST of mRNA_M-pyrifera_M_contig126054.5261.1 vs. uniprot
Match: UPI0006463526 (hypothetical protein n=1 Tax=Alistipes sp. ZOR0009 TaxID=1339253 RepID=UPI0006463526) HSP 1 Score: 71.6 bits (174), Expect = 1.440e-11 Identity = 48/159 (30.19%), Postives = 87/159 (54.72%), Query Frame = 1
Query: 1 LEGNRSSDYQKAEIFNNALDQVDTQQVRVESLSDAIVLSLNQFNNIDESFIYGALDISYQDLVHLAIKEDL---LYLEKKGLRWQLVTKSEFTSGHIQSKLDALNSFPEQFNEYYEVHKNLLFEHK--PEWISFDLLDINLGERWIPIEIWTAFLNDFF 462
LE ++ + KA+IF + +++ +VES +DA++ SLN+F +D ++I L + ++K+DL + + ++L + +F SG+I K+D+ N+F + + ++L K PE I F++LD NLGERWIP + ++ F F
Sbjct: 533 LENSKDQKFVKADIFEKPV--AFSKESKVESANDALIKSLNKFGTVDLNYITSILQKEEK-----SVKDDLKDLILFNPENSNYEL--RDKFLSGNIIEKIDSANNFLLKNPNHLPAQESLSELKKVIPERIPFEVLDFNLGERWIPNKYYSDFATKLF 682 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126054.5261.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig126054.5261.1 >prot_M-pyrifera_M_contig126054.5261.1 ID=prot_M-pyrifera_M_contig126054.5261.1|Name=mRNA_M-pyrifera_M_contig126054.5261.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=157bp LEGNRSSDYQKAEIFNNALDQVDTQQVRVESLSDAIVLSLNQFNNIDESFback to top mRNA from alignment at M-pyrifera_M_contig126054:3..473+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig126054.5261.1 ID=mRNA_M-pyrifera_M_contig126054.5261.1|Name=mRNA_M-pyrifera_M_contig126054.5261.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=471bp|location=Sequence derived from alignment at M-pyrifera_M_contig126054:3..473+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig126054:3..473+ >mRNA_M-pyrifera_M_contig126054.5261.1 ID=mRNA_M-pyrifera_M_contig126054.5261.1|Name=mRNA_M-pyrifera_M_contig126054.5261.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=942bp|location=Sequence derived from alignment at M-pyrifera_M_contig126054:3..473+ (Macrocystis pyrifera P11B4 male)back to top |