mRNA_M-pyrifera_M_contig125998.5248.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig125998.5248.1
Unique NamemRNA_M-pyrifera_M_contig125998.5248.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig125998.5248.1 vs. uniprot
Match: A0A847G8Z4_9BACT (Metallophos domain-containing protein n=1 Tax=Candidatus Hydrogenedens sp. TaxID=2654184 RepID=A0A847G8Z4_9BACT)

HSP 1 Score: 156 bits (394), Expect = 3.780e-44
Identity = 71/137 (51.82%), Postives = 93/137 (67.88%), Query Frame = 1
Query:   10 PEQRAELSIADPSSIRMLQLTDIHFFCKKD-----EPERDKQTLEDIPRLIDKTQPELLLISGDLWHDNPDGQGRAYMEFALEQLGKWGVPWLFTWGNHDRLSDYVAGHDVLHDARHSLYRGGASGGNYVVSLKDKA 405
            P        A+ S+IR+LQ TDIHFF   D     E  R + TL+D  R+ID+ +P+LL ++GDLWHDNP+G+G  +M +ALEQ   WG+PW FTWGNHD+LSDY  GH  L  A+HSLY G  +GGNYV++ +D A
Sbjct:   33 PVWEKRFKAANASAIRLLQFTDIHFFSGVDKTPLQEKRRRQMTLDDTRRIIDQAKPDLLFVTGDLWHDNPNGRGAEFMAYALEQCSAWGLPWAFTWGNHDQLSDYAVGHKALKAAKHSLYGGAENGGNYVLAFEDGA 169          
BLAST of mRNA_M-pyrifera_M_contig125998.5248.1 vs. uniprot
Match: A0A7C1GSL1_9BACT (Metallophos domain-containing protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C1GSL1_9BACT)

HSP 1 Score: 150 bits (380), Expect = 5.220e-42
Identity = 71/138 (51.45%), Postives = 98/138 (71.01%), Query Frame = 1
Query:    4 TYPEQRAELSIADPSSIRMLQLTDIHFFC------KKDEPERDKQTLEDIPRLIDKTQPELLLISGDLWHDNPDGQGRAYMEFALEQLGKWGVPWLFTWGNHDRLSDYVAGHDVLHDARHSLYRGGASGGNYVVSLKD 399
            T P     L I D S+IR+LQ TD+HFF       +++E +R K TL+D+ RLID  +P++LL++GDLWHDNPDG+G  +M +A+EQ G  G+PW FTWGNHD+L DY  GH  L +A+++LY G  S GNYV++L+D
Sbjct:   35 TSPSWEKRLHIPDSSAIRILQFTDVHFFNGTGRWPQREEKQRLK-TLDDMRRLIDHAKPDVLLVTGDLWHDNPDGRGAEFMVYAVEQCGGLGIPWAFTWGNHDQLDDYAMGHKALAEAKNTLYAGMESDGNYVLALED 171          
BLAST of mRNA_M-pyrifera_M_contig125998.5248.1 vs. uniprot
Match: A0A1V6ES87_9BACT (Calcineurin-like phosphoesterase n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin101 TaxID=1852847 RepID=A0A1V6ES87_9BACT)

HSP 1 Score: 147 bits (372), Expect = 7.250e-41
Identity = 70/136 (51.47%), Postives = 93/136 (68.38%), Query Frame = 1
Query:   10 PEQRAELSIADPSSIRMLQLTDIHFF-----CKKDEPERDKQTLEDIPRLIDKTQPELLLISGDLWHDNPDGQGRAYMEFALEQLGKWGVPWLFTWGNHDRLSDYVAGHDVLHDARHSLYRGGASGGNYVVSLKDK 402
            P     LS++ PS  R+LQ TD+HFF       K+E  R  +T+ED+ RL+D  +P+LL+I+GDLWH+NPD +G  +  +ALEQ G  GVPW+FTWGNHD L DY AGH  L  A+ SLY G  S GNYV++++DK
Sbjct:   35 PPWETRLSVSSPS-FRVLQFTDVHFFNGITKMPKEEQRRRNKTVEDLRRLVDHAKPDLLVITGDLWHENPDNRGAEFQAYALEQCGALGVPWIFTWGNHDTLDDYEAGHAALAGAKGSLYGGRHSDGNYVLTVEDK 169          
BLAST of mRNA_M-pyrifera_M_contig125998.5248.1 vs. uniprot
Match: A0A7C3HKM9_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7C3HKM9_9BACT)

HSP 1 Score: 148 bits (373), Expect = 3.820e-40
Identity = 63/126 (50.00%), Postives = 90/126 (71.43%), Query Frame = 1
Query:   22 AELSIADPSSIRMLQLTDIHFFCKKDEPERDKQTLEDIPRLIDKTQPELLLISGDLWHDNPDGQGRAYMEFALEQLGKWGVPWLFTWGNHDRLSDYVAGHDVLHDARHSLYRGGASGGNYVVSLKD 399
            +EL I DPS  ++LQ+TDIH+F K      D +TL ++ RL++ T+P+LL+++GD WH+NPDG+G  YM FA++   + G+PW F WGNHDR+++Y   HD L  A HSLY GG + GNYV+ +KD
Sbjct:   47 SELVIRDPSQFKILQITDIHYFGKTSR--EDARTLVNLKRLVEYTEPDLLMVTGDFWHNNPDGRGEEYMNFAVQHTEELGIPWAFAWGNHDRVNNYSRAHDTLEQAAHSLYAGGKAHGNYVIHVKD 170          
BLAST of mRNA_M-pyrifera_M_contig125998.5248.1 vs. uniprot
Match: A0A3B9GB08_9BACT (Metallophos domain-containing protein n=7 Tax=Verrucomicrobiales TaxID=48461 RepID=A0A3B9GB08_9BACT)

HSP 1 Score: 141 bits (356), Expect = 1.570e-38
Identity = 64/128 (50.00%), Postives = 93/128 (72.66%), Query Frame = 1
Query:   16 QRAELSIADPSSIRMLQLTDIHFFCKKDE--PERDKQTLEDIPRLIDKTQPELLLISGDLWHDNPDGQGRAYMEFALEQLGKWGVPWLFTWGNHDRLSDYVAGHDVLHDARHSLYRGGASGGNYVVSL 393
            ++A+L + +  ++R+LQ TDIHFFC +++   + D QT+ED+ R+I+ T P LL I+GDLW DNP GQG+ ++E++L+++   G PWLF WGNHDRL DY A    L +A +SLYRGG  GGNY +S+
Sbjct:   46 RKAQLKV-EGDNLRILQFTDIHFFCDREKFGEKADLQTVEDMKRMIENTDPHLLAITGDLWSDNPRGQGQEFLEYSLKKITSLGKPWLFNWGNHDRLDDYAAAQVTLTEATNSLYRGGHDGGNYRISI 172          
BLAST of mRNA_M-pyrifera_M_contig125998.5248.1 vs. uniprot
Match: A0A1V5YY95_9BACT (Calcineurin-like phosphoesterase n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin170 TaxID=1852848 RepID=A0A1V5YY95_9BACT)

HSP 1 Score: 139 bits (351), Expect = 9.900e-38
Identity = 64/129 (49.61%), Postives = 92/129 (71.32%), Query Frame = 1
Query:   37 ADPSSIRMLQLTDIHFFCK-KDEPE----RDKQTLEDIPRLIDKTQPELLLISGDLWHDNPDGQGRAYMEFALEQLGKWGVPWLFTWGNHDRLSDYVAGHDVLHDARHSLYRGGA-SGGNYVVSLKDKA 405
            A+ S IR+LQ TD+HFF     EPE    + +QT +D+ RL+D T+P+LL ++GD WH+NPDG+G  ++ F++E++   G+PW+FTWGNHD L DY  GH  L  ARHSLY G + +GG+YV  +KD++
Sbjct:   43 ANSSEIRLLQFTDLHFFAGISHEPEISEIQRQQTFDDMRRLVDLTRPDLLAVTGDFWHENPDGRGLEFLHFSVEKVADLGIPWVFTWGNHDHLDDYDKGHKALAQARHSLYGGTSKNGGHYVTRIKDRS 171          
BLAST of mRNA_M-pyrifera_M_contig125998.5248.1 vs. uniprot
Match: A0A7C3ACS3_9BACT (Twin-arginine translocation signal domain-containing protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C3ACS3_9BACT)

HSP 1 Score: 137 bits (345), Expect = 1.050e-36
Identity = 59/128 (46.09%), Postives = 85/128 (66.41%), Query Frame = 1
Query:   22 AELSIADPSSIRMLQLTDIHFFCKKDEPERDKQTLEDIPRLIDKTQPELLLISGDLWHDNPDGQGRAYMEFALEQLGKWGVPWLFTWGNHDRLSDYVAGHDVLHDARHSLYRGGASGGNYVVSLKDKA 405
            A L + DP+ I++LQ TD+HFF      +R++ T   + RL++   P+++ ++GDLWHDNP G+G  YM +A+++L   G+PW FTWGNHD L DY  GH+    A+HSLYRG A  GNY+V   + A
Sbjct:   45 AVLQVKDPTRIKLLQFTDMHFFNFARGRDRNEDTASALLRLVEINAPDMIAVTGDLWHDNPKGRGEEYMRYAIDKLEALGMPWFFTWGNHDLLDDYDKGHEAFTHAKHSLYRGAAGNGNYLVRCVNSA 172          
BLAST of mRNA_M-pyrifera_M_contig125998.5248.1 vs. uniprot
Match: A0A1E4G180_9BACT (Metallophos domain-containing protein n=1 Tax=bacterium SCN 62-11 TaxID=1660156 RepID=A0A1E4G180_9BACT)

HSP 1 Score: 133 bits (335), Expect = 2.250e-35
Identity = 65/130 (50.00%), Postives = 87/130 (66.92%), Query Frame = 1
Query:   13 EQRAELSIADPSSIRMLQLTDIHFFCKKDEPERDKQTLEDIPRLIDKTQPELLLISGDLWHDNPDGQGRAYMEFALEQLGKWGVPWLFTWGNHDRLSDYVAGHDVLHDARHSLYRGGASGGNYVVSLKDK 402
            E  + ++  DPS I+MLQ TD+HF+      + D++T ED+ RL+D   P+LLLI+GDLW++NP   G   M+  L  +   G PWLFTWGNHDRL DYVAGH  L  AR+SLYRGG + G Y V L+++
Sbjct:   42 ESISTIAFQDPSKIKMLQFTDMHFYQWPWRRDLDRRTREDMLRLVDLHAPDLLLITGDLWNNNPMHAGHHLMQDCLSFIESLGRPWLFTWGNHDRLDDYVAGHRTLTSARNSLYRGGKNSGCYQVHLQNR 171          
BLAST of mRNA_M-pyrifera_M_contig125998.5248.1 vs. uniprot
Match: A0A7C4V1Y3_9BACT (Metallophos domain-containing protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C4V1Y3_9BACT)

HSP 1 Score: 130 bits (327), Expect = 3.730e-34
Identity = 62/134 (46.27%), Postives = 89/134 (66.42%), Query Frame = 1
Query:    4 TYPEQRAELSIADP-SSIRMLQLTDIHFFCKKDEPERDKQTLEDIPRLIDKTQPELLLISGDLWHDNPDGQGRAYMEFALEQLGKWGVPWLFTWGNHDRLSDYVAGHDVLHDARHSLYRGGASGGNYVVSLKDK 402
            T+ E   EL ++    SI++LQ TDIHF   +   + D+ + + + +L+D T+P LL I+GD W +NP G+G +++E A+E  G  GVPWL+TWGNHD LSDY  GHD+L   +HS+YRGG   GNY V + D+
Sbjct:   30 TFKETVFELKLSGKVESIKLLQFTDIHFNPLRKGRKEDETSKDIMRKLVDLTEPHLLAITGDTWAENPFGKGLSFLEGAVEFFGTLGVPWLYTWGNHDMLSDYSKGHDLLASGKHSMYRGGREYGNYEVVINDE 163          
BLAST of mRNA_M-pyrifera_M_contig125998.5248.1 vs. uniprot
Match: A0A7V2TRB0_9BACT (Metallophos domain-containing protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V2TRB0_9BACT)

HSP 1 Score: 130 bits (326), Expect = 4.650e-34
Identity = 59/128 (46.09%), Postives = 90/128 (70.31%), Query Frame = 1
Query:   25 ELSIADPSSIRMLQLTDIHFFCK-KDEPER----DKQTLEDIPRLIDKTQPELLLISGDLWHDNPDGQGRAYMEFALEQLGKWGVPWLFTWGNHDRLSDYVAGHDVLHDARHSLYRGGASGGNYVVSL 393
            EL++ +   IR+LQ TDIHFF   KD PE     + +T + + +L D+T+P+L++++GD WH+NPDG+G  +M++A+ QL   GVPW++TWGNHD L+DY  GH  + +A++SLY G    GNY++ L
Sbjct:   38 ELAV-NKKEIRLLQFTDIHFFAGLKDSPEHAVKGNSRTADAMRQLTDQTKPQLVIVTGDFWHNNPDGRGAEFMDYAVSQLETLGVPWIYTWGNHDELTDYAVGHRRMTEAKNSLYGGAEDDGNYLLRL 164          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125998.5248.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A847G8Z4_9BACT3.780e-4451.82Metallophos domain-containing protein n=1 Tax=Cand... [more]
A0A7C1GSL1_9BACT5.220e-4251.45Metallophos domain-containing protein n=1 Tax=Cand... [more]
A0A1V6ES87_9BACT7.250e-4151.47Calcineurin-like phosphoesterase n=1 Tax=Candidatu... [more]
A0A7C3HKM9_9BACT3.820e-4050.00T9SS type A sorting domain-containing protein n=1 ... [more]
A0A3B9GB08_9BACT1.570e-3850.00Metallophos domain-containing protein n=7 Tax=Verr... [more]
A0A1V5YY95_9BACT9.900e-3849.61Calcineurin-like phosphoesterase n=1 Tax=Candidatu... [more]
A0A7C3ACS3_9BACT1.050e-3646.09Twin-arginine translocation signal domain-containi... [more]
A0A1E4G180_9BACT2.250e-3550.00Metallophos domain-containing protein n=1 Tax=bact... [more]
A0A7C4V1Y3_9BACT3.730e-3446.27Metallophos domain-containing protein n=1 Tax=Cand... [more]
A0A7V2TRB0_9BACT4.650e-3446.09Metallophos domain-containing protein n=1 Tax=Cand... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig125998contigM-pyrifera_M_contig125998:4..408 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score60.1
Seed ortholog evalue9.3e-07
Seed eggNOG ortholog1536770.R50345_04025
Hectar predicted targeting categoryother localisation
EggNOG free text desc.metallophosphoesterase
EggNOG OGs1V574@1239,26S57@186822,4HW52@91061,COG1409@1,COG1409@2
COG Functional cat.S
Best tax levelPaenibacillaceae
Best eggNOG OGNA|NA|NA
Exons1
Model size405
Cds size405
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815775.2263877-CDS-M-pyrifera_M_contig125998:3..4081622815775.2263877-CDS-M-pyrifera_M_contig125998:3..408Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig125998 4..408 -
1692277563.6774561-CDS-M-pyrifera_M_contig125998:3..4081692277563.6774561-CDS-M-pyrifera_M_contig125998:3..408Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig125998 4..408 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig125998.5248.1prot_M-pyrifera_M_contig125998.5248.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig125998 4..408 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig125998.5248.1

>prot_M-pyrifera_M_contig125998.5248.1 ID=prot_M-pyrifera_M_contig125998.5248.1|Name=mRNA_M-pyrifera_M_contig125998.5248.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=135bp
MTYPEQRAELSIADPSSIRMLQLTDIHFFCKKDEPERDKQTLEDIPRLID
KTQPELLLISGDLWHDNPDGQGRAYMEFALEQLGKWGVPWLFTWGNHDRL
SDYVAGHDVLHDARHSLYRGGASGGNYVVSLKDKA
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mRNA from alignment at M-pyrifera_M_contig125998:4..408-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig125998.5248.1 ID=mRNA_M-pyrifera_M_contig125998.5248.1|Name=mRNA_M-pyrifera_M_contig125998.5248.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=405bp|location=Sequence derived from alignment at M-pyrifera_M_contig125998:4..408- (Macrocystis pyrifera P11B4 male)
ATGACCTATCCCGAGCAGCGGGCGGAGCTCTCTATCGCCGACCCCTCCAG CATCCGTATGCTCCAGTTGACGGATATCCATTTCTTCTGCAAGAAGGATG AGCCGGAACGAGACAAACAGACCCTGGAAGACATTCCACGGCTTATCGAC AAGACCCAACCAGAGCTCCTGTTGATTTCGGGGGACCTCTGGCACGACAA CCCCGACGGTCAGGGACGGGCCTACATGGAGTTCGCCCTGGAGCAACTGG GTAAATGGGGCGTGCCGTGGCTCTTTACCTGGGGCAATCACGACCGCCTG AGTGATTACGTGGCGGGCCACGATGTGCTCCATGACGCGCGCCATTCCCT CTACCGGGGTGGGGCGAGTGGGGGAAATTATGTGGTTTCGCTGAAAGACA AAGCA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig125998:4..408-

>mRNA_M-pyrifera_M_contig125998.5248.1 ID=mRNA_M-pyrifera_M_contig125998.5248.1|Name=mRNA_M-pyrifera_M_contig125998.5248.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=810bp|location=Sequence derived from alignment at M-pyrifera_M_contig125998:4..408- (Macrocystis pyrifera P11B4 male)
ATGACCTATCCCGAGCAGCGGGCGGAGCTCTCTATCGCCGACCCCTCCAG
CATCCGTATGCTCCAGTTGACGGATATCCATTTCTTCTGCAAGAAGGATG
AGCCGGAACGAGACAAACAGACCCTGGAAGACATTCCACGGCTTATCGAC
AAGACCCAACCAGAGCTCCTGTTGATTTCGGGGGACCTCTGGCACGACAA
CCCCGACGGTCAGGGACGGGCCTACATGGAGTTCGCCCTGGAGCAACTGG
GTAAATGGGGCGTGCCGTGGCTCTTTACCTGGGGCAATCACGACCGCCTG
AGTGATTACGTGGCGGGCCACGATGTGCTCCATGACGCGCGCCATTCCCT
CTACCGGGGTGGGGCGAGTGGGGGAAATTATGTGGTTTCGCTGAAAGACA
AAGCAATGACCTATCCCGAGCAGCGGGCGGAGCTCTCTATCGCCGACCCC
TCCAGCATCCGTATGCTCCAGTTGACGGATATCCATTTCTTCTGCAAGAA
GGATGAGCCGGAACGAGACAAACAGACCCTGGAAGACATTCCACGGCTTA
TCGACAAGACCCAACCAGAGCTCCTGTTGATTTCGGGGGACCTCTGGCAC
GACAACCCCGACGGTCAGGGACGGGCCTACATGGAGTTCGCCCTGGAGCA
ACTGGGTAAATGGGGCGTGCCGTGGCTCTTTACCTGGGGCAATCACGACC
GCCTGAGTGATTACGTGGCGGGCCACGATGTGCTCCATGACGCGCGCCAT
TCCCTCTACCGGGGTGGGGCGAGTGGGGGAAATTATGTGGTTTCGCTGAA
AGACAAAGCA
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