mRNA_M-pyrifera_M_contig125944.5241.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig125944.5241.1
Unique NamemRNA_M-pyrifera_M_contig125944.5241.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig125944.5241.1 vs. uniprot
Match: V4AYP6_LOTGI (Transcription initiation factor IIB n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4AYP6_LOTGI)

HSP 1 Score: 92.4 bits (228), Expect = 2.070e-19
Identity = 56/167 (33.53%), Postives = 94/167 (56.29%), Query Frame = 1
Query:    1 DKAAGMVVCRDCGCVVDDRVISEECEWRTFTTDSSAPDASRVGRAADSKLSAAAQFNTGVAAAPNGDSSLARKHAKSLASLGAGDKQLLRGYAEVDRLSDKLRASEAVVAQAKEYFGEMNGGLTLRGLRLTAMCAATVFLACKQQRAVRLRKEAALVAGVRERALNR 501
            D  AG ++C +CG VV DRVI    EWRTF+ D  A DASRVG AA++ L      +T +AA P G+ S  R       ++ + D+ L+  + E+++++D+L   + +  +    F  ++ G +LRG    A+ +A V++AC+Q+   R  KE   V+ + ++ + R
Sbjct:   25 DHHAGDMICPECGLVVGDRVIDVGSEWRTFSNDKDAKDASRVG-AAENSLLDGGDLSTMIAAVPGGEDSGYRNRR----TISSSDRTLISAFKEINQMADRLNLPKMIADRGSTLFKTVHEGKSLRGRSNDAIVSACVYIACRQEGVPRTFKEICAVSKISKKEIGR 186          
BLAST of mRNA_M-pyrifera_M_contig125944.5241.1 vs. uniprot
Match: A0A0G4IK27_PLABS (TFIIB-type domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IK27_PLABS)

HSP 1 Score: 92.8 bits (229), Expect = 2.240e-19
Identity = 63/169 (37.28%), Postives = 95/169 (56.21%), Query Frame = 1
Query:    1 DKAAGMVVCRDCGCVVDDRVISEECEWRTFTTDSSA--PDASRVGRAADSKLSAAAQFNTGVAAAPNGDSSLARKHAKSLASLGAGDKQLLRGYAEVDRLSDKLRASEAVVAQAKEYFGEMNGGLTLRGLRLTAMCAATVFLACKQQRAVRLRKEAALVAGVRERALNR 501
            D + G  VC DCG VV DR+I++E EWRTF++D  A   D +RVG   D+ L    +  TG+AA P+  +S+  K  +SLAS    +K ++ G++E+     ++  S++V  +AKE F +M+    LRG     +  A +F+AC+ Q   R RKE   +  V  R L R
Sbjct:   34 DSSGGKFVCTDCGIVVGDRLITDESEWRTFSSDHGAGGDDRNRVG-GPDNPLFEDRELTTGIAADPSNMNSVLGKW-QSLASGRGSEKTIIEGFSEIGEFGHRMDLSDSVQYRAKEIFKQMHETKKLRGRPRNLIVTACLFIACQGQNVDRSRKEFCRITDVDLRDLGR 200          
BLAST of mRNA_M-pyrifera_M_contig125944.5241.1 vs. uniprot
Match: A0A0H5R7B4_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R7B4_9EUKA)

HSP 1 Score: 82.8 bits (203), Expect = 1.020e-15
Identity = 56/169 (33.14%), Postives = 91/169 (53.85%), Query Frame = 1
Query:    1 DKAAGMVVCRDCGCVVDDRVISEECEWRTFTTDSSA--PDASRVGRAADSKLSAAAQFNTGVAAAPNGDSSLARKHAKSLASLGAGDKQLLRGYAEVDRLSDKLRASEAVVAQAKEYFGEMNGGLTLRGLRLTAMCAATVFLACKQQRAVRLRKEAALVAGVRERALNR 501
            D + G  VC DCG V+ DR+I++E EWRTF++D  A   D +R+G   D+ L    +  +G+AA  +   S   K  +S+A+    ++ LL G+AE+     ++  S++V  +AKE F  M+    LRG     +  + +F+AC+ +   R RKE   +  +  R L R
Sbjct:   31 DPSGGKYVCVDCGLVLGDRLITDESEWRTFSSDHGAGGDDRNRIG-GPDNPLFEDRELTSGIAADSSNMGSALGKW-QSMAAGRGSERSLLDGFAEIGEFGHRMDLSDSVQLRAKEIFKRMHESKLLRGRNRLLIVTSCLFVACRDENVDRSRKEMCRITDIDLRDLGR 197          
BLAST of mRNA_M-pyrifera_M_contig125944.5241.1 vs. uniprot
Match: L2GT21_VAVCU (TFIIB-type domain-containing protein n=2 Tax=Pleistophoridae TaxID=35232 RepID=L2GT21_VAVCU)

HSP 1 Score: 75.5 bits (184), Expect = 3.640e-13
Identity = 52/168 (30.95%), Postives = 94/168 (55.95%), Query Frame = 1
Query:    1 DKAAGMVVCRDCGCVVDDRVISEECEWRTFTTDSSAPDASRVGRAADSKLSAAAQFNTGVAAAPNGDS-SLARKHAKSLASLGAGDKQLLRGYAEVDRLSDKLRASEAVVAQAKEYFGEMNGGLTLRGLRLTAMCAATVFLACKQQRAVRLRKEAALVAGVRERALNR 501
            D   G V+C +CGC++++ +I E+ EWRTF  D SA D SRVG   ++ L  +   +T +A   N  S +L R   KS  ++   ++QL+ G+  +    D+   S+ +  +AK  F  ++    L+G  L  + AA +++AC+Q+++ R  KE +++  V ++ + R
Sbjct:   24 DTKTGAVLCTNCGCIIENTLIDEKTEWRTF--DDSANDPSRVG-CPNNPLLESEPLDTMIANIGNLHSYTLNRTQMKS--TMRGPERQLINGFNLISAYCDRSNISKTISDRAKLIFKRVDEKKILKGKNLEGVVAACIYIACRQEQSPRTFKEVSVLTAVPKKEIGR 186          
BLAST of mRNA_M-pyrifera_M_contig125944.5241.1 vs. uniprot
Match: A0A1W4XK50_AGRPL (Transcription initiation factor IIB n=2 Tax=Endopterygota TaxID=33392 RepID=A0A1W4XK50_AGRPL)

HSP 1 Score: 72.8 bits (177), Expect = 2.910e-12
Identity = 45/164 (27.44%), Postives = 87/164 (53.05%), Query Frame = 1
Query:   19 VVCRDCGCVVDDRVISEECEWRTFTTDSSAPDASRVGRAADSKLSAA---AQFNTGVAAAPNGDSSLARKHAKSLASLGAGDKQLLRGYAEVDRLSDKLRASEAVVAQAKEYFGEMNGGLTLRGLRLTAMCAATVFLACKQQRAVRLRKEAALVAGVRERALNR 501
            ++C +CG VV DRVI    EWRTF+++ S  D SRVG   +  L+ +        G   A   +  +AR   +   ++ + D+ L+  + E++ ++D++     +V +A   F +++ G  L+G    A+ +A +++AC+Q+   R  KE   V+ + ++ + R
Sbjct:    1 MICSECGLVVGDRVIDVGSEWRTFSSEKSGVDPSRVGGPENPLLNGSDLTTMIGPGRGDASFDEFGMARYQNRR--TMSSSDRALINAFKEINSMADRINLPRTIVDRANNLFKQVHDGRNLKGRSNDAIASACLYIACRQEGVPRTFKEICAVSKISKKEIGR 162          
BLAST of mRNA_M-pyrifera_M_contig125944.5241.1 vs. uniprot
Match: A0A388LSS5_CHABU (TFIIB-type domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LSS5_CHABU)

HSP 1 Score: 66.2 bits (160), Expect = 8.230e-10
Identity = 43/158 (27.22%), Postives = 79/158 (50.00%), Query Frame = 1
Query:    1 DKAAGMVVCRDCGCVVDDRVISEECEWRTFTTDSSAPDASRVGRAADSKLSAAAQFNTGVAAAPNGDSSLARKHAKSLASLGAGDKQLLRGYAEVDRLSDKLRASEAVVAQAKEYFGEMNGGLTLRGLRLTAMCAATVFLACKQQRAVRLRKEAALVA 474
            D AAG ++C++CG V++   I E  EWRTFT ++   D  RVG  ++  L+        + + PNG   +A    +        D+ L+  +  +  ++++L     +  +A E + ++    ++RG    A+ AA +++AC+Q+   R  KE   VA
Sbjct:   17 DHAAGDMICKECGLVLESHSIDETSEWRTFTNEAGNTDPVRVGGPSNPLLTDGGLST--IISRPNGGGEIAGNLGRWQNRGANPDRNLINAFRSIAGMAERLGLVSTIKDRANEIYKKVEDLKSIRGRSQDAILAACLYIACRQEDRPRTFKEICAVA 172          
BLAST of mRNA_M-pyrifera_M_contig125944.5241.1 vs. uniprot
Match: A0A7R9VQN9_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VQN9_9CHLO)

HSP 1 Score: 66.2 bits (160), Expect = 1.040e-9
Identity = 48/148 (32.43%), Postives = 74/148 (50.00%), Query Frame = 1
Query:    1 DKAAGMVVCRDCGCVVDDRVISEECEWRTFTT-DSSAPDASRVGRAADSKLSAAAQFNT-GVAAAPNGDS-SLARKHAKSLASLGAGDKQLLRGYAEVDRLSDKLRASEAVVAQAKEYFGEMNGGLTLRGLRLTAMCAATVFLACKQQ 435
            D A G VVCR CG VV + +I E  EWRTF+  D    D +RVG  ++  L  A      G      G+S SL+R HA+S     A D+ ++  +  +  + ++L     +  +A E + E      ++G    A+ A  V+LAC+Q+
Sbjct:   23 DHAQGDVVCRGCGLVVQEHIIDERSEWRTFSDKDKEGTDPNRVGGPSNPLLGGAGLSTVIGKVQGDAGNSFSLSRLHARS-----AQDRNMMAAFKLIGNMCEQLTVVNTIKDRACELYKEAMSTGAMKGKGTQAVAAGCVYLACRQE 165          
BLAST of mRNA_M-pyrifera_M_contig125944.5241.1 vs. uniprot
Match: A0A7S0R574_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0R574_9CHLO)

HSP 1 Score: 62.4 bits (150), Expect = 9.140e-9
Identity = 51/163 (31.29%), Postives = 88/163 (53.99%), Query Frame = 1
Query:    1 DKAAGMVVCRDCGCVVDDRVISEECEWRTFT-TDSSAPDASRVGRAADSKLSAAAQFNTGVAAAPNGDSSLARKHAKSLASL---GAG-DKQLLRGYAEVDRLSDKLRASEAVVAQAKEYFGEMNGGLTLRGLRLTAMCAATVFLACKQQRAVRLRKEAALVA 474
            D +AG ++C +CG V++ R I E  EWRTF+ +D ++ D SRVG   +  L      +T +     GDSS     A +LA L   G+  D+ L+  ++ +  ++D+L     +  +A E + ++    ++RG   +A+ AA +++AC+Q+   R  KE   VA
Sbjct:   27 DHSAGDLICTNCGLVLEARTIDESTEWRTFSNSDGNSQDPSRVGGPTNPLLRDGG-LSTVIG---KGDSS--GSAATALARLQHRGSNPDRNLISAFSAIGEMADRLGLVPTIKDRANENYRDIAEHKSIRGRSASAIHAACLYIACRQEDRPRTFKEICSVA 183          
BLAST of mRNA_M-pyrifera_M_contig125944.5241.1 vs. uniprot
Match: A0A2A9M9A6_9APIC (Transcription initiation factor IIB n=1 Tax=Besnoitia besnoiti TaxID=94643 RepID=A0A2A9M9A6_9APIC)

HSP 1 Score: 62.4 bits (150), Expect = 2.600e-8
Identity = 51/172 (29.65%), Postives = 84/172 (48.84%), Query Frame = 1
Query:    1 DKAAGMVVCRDCGCVVDDRVISEECEWRTFTTDSSAP-----DASRVGRAADSKLSAAAQFNTGVAAAPNGD-SSLARKHAKSLASL------------GAGDKQLLRGYAEVDRLSDKLRASEAVVAQAKEYFGE-MNGGLTLRGLRLTAMCAATVFLACKQQRAVRLRKE 459
            D ++G  +CR+CG +V+++V+SEE EWR F+ ++++      D +RVG A DS L       T + A+  G  +  A   AK L  L            G+GD+QL   +  +  + +     + V+ +AKE   + M  G+ LR         A ++LAC++    R  KE
Sbjct:  149 DSSSGDQLCRECGLIVEEKVLSEEQEWRNFSAEAASSSRGGADRNRVGDALDSWLEDGGIGTTMLVASGGGPLAGKAASSAKRLQQLHEATTAGLGSGAGSGDRQLKVAFNYIRLIGEAFALRDNVLERAKEITKDLMQDGVQLRTRSNATTMLAIIYLACREAGITRTVKE 320          
BLAST of mRNA_M-pyrifera_M_contig125944.5241.1 vs. uniprot
Match: S7UPQ1_TOXGG (Transcription initiation factor IIB n=17 Tax=Toxoplasma gondii TaxID=5811 RepID=S7UPQ1_TOXGG)

HSP 1 Score: 61.6 bits (148), Expect = 4.740e-8
Identity = 51/172 (29.65%), Postives = 84/172 (48.84%), Query Frame = 1
Query:    1 DKAAGMVVCRDCGCVVDDRVISEECEWRTFTTDSSAP-----DASRVGRAADSKLSAAAQFNTGVAAAPNGD-SSLARKHAKSLASL------------GAGDKQLLRGYAEVDRLSDKLRASEAVVAQAKEYFGE-MNGGLTLRGLRLTAMCAATVFLACKQQRAVRLRKE 459
            D ++G  +CR+CG +V+++V+SEE EWR F+ ++++      D +RVG A D+ L       T + A+  G  +  A   AK L  L            G+GD+QL   +  +  + +     + V+ +AKE   + M  G+ LR    T    A  +LAC++    R  KE
Sbjct:  127 DSSSGDQLCRECGLIVEEKVLSEEQEWRNFSAEAASSSRGGADRNRVGDALDAWLEDGGIGTTMLVASSGGPLAGKAAWSAKRLQQLHEAATSGLGSGVGSGDRQLKVAFNYIRLIGEAFALRDNVLERAKEITKDLMQDGVQLRTRSNTTTMLAITYLACREAGVTRTVKE 298          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125944.5241.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
V4AYP6_LOTGI2.070e-1933.53Transcription initiation factor IIB n=1 Tax=Lottia... [more]
A0A0G4IK27_PLABS2.240e-1937.28TFIIB-type domain-containing protein n=1 Tax=Plasm... [more]
A0A0H5R7B4_9EUKA1.020e-1533.14Uncharacterized protein (Fragment) n=1 Tax=Spongos... [more]
L2GT21_VAVCU3.640e-1330.95TFIIB-type domain-containing protein n=2 Tax=Pleis... [more]
A0A1W4XK50_AGRPL2.910e-1227.44Transcription initiation factor IIB n=2 Tax=Endopt... [more]
A0A388LSS5_CHABU8.230e-1027.22TFIIB-type domain-containing protein n=1 Tax=Chara... [more]
A0A7R9VQN9_9CHLO1.040e-932.43Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]
A0A7S0R574_9CHLO9.140e-931.29Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A2A9M9A6_9APIC2.600e-829.65Transcription initiation factor IIB n=1 Tax=Besnoi... [more]
S7UPQ1_TOXGG4.740e-829.65Transcription initiation factor IIB n=17 Tax=Toxop... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig125944contigM-pyrifera_M_contig125944:1..501 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score89.4
Seed ortholog evalue1.7e-15
Seed eggNOG ortholog5786.XP_003284652.1
Preferred nameGTF2B
KEGG koko:K03124
KEGG Pathwayko03022,ko05169,ko05203,map03022,map05169,map05203
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000428,GO:0000769,GO:0000976,GO:0000977,GO:0000979,GO:0000988,GO:0000989,GO:0000990,GO:0000991,GO:0000993,GO:0001012,GO:0001046,GO:0001047,GO:0001067,GO:0001076,GO:0001098,GO:0001099,GO:0001112,GO:0001113,GO:0001120,GO:0001129,GO:0001132,GO:0001139,GO:0001173,GO:0001174,GO:0001558,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005669,GO:0005694,GO:0005737,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006357,GO:0006366,GO:0006367,GO:0006464,GO:0006473,GO:0006725,GO:0006807,GO:0006935,GO:0006949,GO:0007275,GO:0008134,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009301,GO:0009605,GO:0009653,GO:0009791,GO:0009856,GO:0009888,GO:0009889,GO:0009891,GO:0009893,GO:0009960,GO:0009987,GO:0010035,GO:0010038,GO:0010154,GO:0010183,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010769,GO:0016043,GO:0016070,GO:0016073,GO:0016407,GO:0016591,GO:0016604,GO:0016740,GO:0016746,GO:0016747,GO:0017025,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019899,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0030880,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032774,GO:0032991,GO:0032993,GO:0034367,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0035257,GO:0035821,GO:0036211,GO:0040008,GO:0040011,GO:0042221,GO:0042330,GO:0042795,GO:0043167,GO:0043169,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043388,GO:0043412,GO:0043543,GO:0043565,GO:0043900,GO:0043902,GO:0043903,GO:0043921,GO:0043923,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044706,GO:0044798,GO:0044877,GO:0045595,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0046686,GO:0046782,GO:0046872,GO:0046914,GO:0046966,GO:0048316,GO:0048518,GO:0048522,GO:0048524,GO:0048608,GO:0048638,GO:0048646,GO:0048731,GO:0048856,GO:0048868,GO:0050434,GO:0050789,GO:0050792,GO:0050793,GO:0050794,GO:0050896,GO:0050918,GO:0051098,GO:0051099,GO:0051101,GO:0051123,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051239,GO:0051252,GO:0051254,GO:0051427,GO:0051510,GO:0051702,GO:0051704,GO:0051817,GO:0051851,GO:0052312,GO:0052472,GO:0055029,GO:0060255,GO:0060260,GO:0060261,GO:0060284,GO:0061458,GO:0061695,GO:0065003,GO:0065004,GO:0065007,GO:0065009,GO:0070013,GO:0070063,GO:0070897,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0080092,GO:0090304,GO:0090575,GO:0097159,GO:0097550,GO:0097659,GO:0098781,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1902494,GO:1902680,GO:1903506,GO:1903508,GO:1904796,GO:1904798,GO:1990114,GO:1990234,GO:1990837,GO:1990841,GO:2000112,GO:2000142,GO:2000144,GO:2000241,GO:2000677,GO:2000679,GO:2001141
EggNOG free text desc.TBP-class protein binding
EggNOG OGs3X9G6@554915,COG1405@1,KOG1597@2759
COG Functional cat.K
Best tax levelAmoebozoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03021
Exons1
Model size501
Cds size486
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815774.933212-CDS-M-pyrifera_M_contig125944:0..4861622815774.933212-CDS-M-pyrifera_M_contig125944:0..486Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig125944 1..486 -
1692277563.545047-CDS-M-pyrifera_M_contig125944:0..4861692277563.545047-CDS-M-pyrifera_M_contig125944:0..486Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig125944 1..486 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815774.9432697-UTR-M-pyrifera_M_contig125944:486..5011622815774.9432697-UTR-M-pyrifera_M_contig125944:486..501Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig125944 487..501 -
1692277563.562116-UTR-M-pyrifera_M_contig125944:486..5011692277563.562116-UTR-M-pyrifera_M_contig125944:486..501Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig125944 487..501 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig125944.5241.1prot_M-pyrifera_M_contig125944.5241.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig125944 1..486 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig125944.5241.1

>prot_M-pyrifera_M_contig125944.5241.1 ID=prot_M-pyrifera_M_contig125944.5241.1|Name=mRNA_M-pyrifera_M_contig125944.5241.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=162bp
MVVCRDCGCVVDDRVISEECEWRTFTTDSSAPDASRVGRAADSKLSAAAQ
FNTGVAAAPNGDSSLARKHAKSLASLGAGDKQLLRGYAEVDRLSDKLRAS
EAVVAQAKEYFGEMNGGLTLRGLRLTAMCAATVFLACKQQRAVRLRKEAA
LVAGVRERALNR
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mRNA from alignment at M-pyrifera_M_contig125944:1..501-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig125944.5241.1 ID=mRNA_M-pyrifera_M_contig125944.5241.1|Name=mRNA_M-pyrifera_M_contig125944.5241.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=501bp|location=Sequence derived from alignment at M-pyrifera_M_contig125944:1..501- (Macrocystis pyrifera P11B4 male)
GACAAGGCGGCTGGAATGGTGGTGTGCCGCGACTGTGGCTGTGTTGTGGA TGACCGCGTGATTAGCGAGGAGTGCGAGTGGAGGACGTTCACCACAGACT CGTCCGCGCCAGACGCGTCTCGTGTGGGCCGCGCAGCCGACTCCAAGCTC TCCGCGGCCGCCCAGTTCAACACGGGAGTGGCCGCAGCACCGAACGGAGA CAGCTCGCTGGCGCGCAAGCACGCCAAGTCCCTTGCGTCGCTCGGCGCTG GCGACAAGCAGCTGCTGCGCGGATACGCAGAGGTTGACCGCCTGTCCGAC AAGCTGCGCGCGTCAGAGGCGGTGGTGGCGCAGGCGAAAGAGTACTTTGG CGAGATGAACGGCGGGCTGACACTGCGCGGGCTGAGGCTGACTGCCATGT GCGCAGCGACGGTGTTCCTGGCGTGCAAGCAACAGCGTGCTGTTCGCTTG CGCAAGGAGGCGGCGCTGGTGGCCGGCGTGCGCGAGCGCGCGCTGAACAG G
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig125944:1..501-

>mRNA_M-pyrifera_M_contig125944.5241.1 ID=mRNA_M-pyrifera_M_contig125944.5241.1|Name=mRNA_M-pyrifera_M_contig125944.5241.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=972bp|location=Sequence derived from alignment at M-pyrifera_M_contig125944:1..501- (Macrocystis pyrifera P11B4 male)
ATGGTGGTGTGCCGCGACTGTGGCTGTGTTGTGGATGACCGCGTGATTAG
CGAGGAGTGCGAGTGGAGGACGTTCACCACAGACTCGTCCGCGCCAGACG
CGTCTCGTGTGGGCCGCGCAGCCGACTCCAAGCTCTCCGCGGCCGCCCAG
TTCAACACGGGAGTGGCCGCAGCACCGAACGGAGACAGCTCGCTGGCGCG
CAAGCACGCCAAGTCCCTTGCGTCGCTCGGCGCTGGCGACAAGCAGCTGC
TGCGCGGATACGCAGAGGTTGACCGCCTGTCCGACAAGCTGCGCGCGTCA
GAGGCGGTGGTGGCGCAGGCGAAAGAGTACTTTGGCGAGATGAACGGCGG
GCTGACACTGCGCGGGCTGAGGCTGACTGCCATGTGCGCAGCGACGGTGT
TCCTGGCGTGCAAGCAACAGCGTGCTGTTCGCTTGCGCAAGGAGGCGGCG
CTGGTGGCCGGCGTGCGCGAGCGCGCGCTGAACAGGATGGTGGTGTGCCG
CGACTGTGGCTGTGTTGTGGATGACCGCGTGATTAGCGAGGAGTGCGAGT
GGAGGACGTTCACCACAGACTCGTCCGCGCCAGACGCGTCTCGTGTGGGC
CGCGCAGCCGACTCCAAGCTCTCCGCGGCCGCCCAGTTCAACACGGGAGT
GGCCGCAGCACCGAACGGAGACAGCTCGCTGGCGCGCAAGCACGCCAAGT
CCCTTGCGTCGCTCGGCGCTGGCGACAAGCAGCTGCTGCGCGGATACGCA
GAGGTTGACCGCCTGTCCGACAAGCTGCGCGCGTCAGAGGCGGTGGTGGC
GCAGGCGAAAGAGTACTTTGGCGAGATGAACGGCGGGCTGACACTGCGCG
GGCTGAGGCTGACTGCCATGTGCGCAGCGACGGTGTTCCTGGCGTGCAAG
CAACAGCGTGCTGTTCGCTTGCGCAAGGAGGCGGCGCTGGTGGCCGGCGT
GCGCGAGCGCGCGCTGAACAGG
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