mRNA_M-pyrifera_M_contig125932.5239.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig125932.5239.1
Unique NamemRNA_M-pyrifera_M_contig125932.5239.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig125932.5239.1 vs. uniprot
Match: A0A2P6NMD2_9EUKA (Putative phosphatidylinositol-4-phosphate 5-kinase n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NMD2_9EUKA)

HSP 1 Score: 70.9 bits (172), Expect = 2.150e-12
Identity = 36/87 (41.38%), Postives = 54/87 (62.07%), Query Frame = 1
Query:   19 AQFLESNNLIDYSLLVGVHYTGQGQSQDFV------EGGR----YKPFHKRCLGGLLSADGKEIYYIGIIDFLTTYTLRKKGETFAK 249
            AQ+LESN + DYS L+G H+  +G++++F       EG R     + F ++ +GGL+S DG E+Y+IGIID LT +  +K  E   K
Sbjct:  947 AQWLESNGICDYSFLIGYHFVSEGEAEEFGMGKPQREGKRRFSSVRSFFQQDVGGLVSVDGLEVYFIGIIDILTAWDYKKMTEHLTK 1033          
BLAST of mRNA_M-pyrifera_M_contig125932.5239.1 vs. uniprot
Match: A0A7S4MKD1_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MKD1_9EUKA)

HSP 1 Score: 69.3 bits (168), Expect = 2.160e-12
Identity = 35/80 (43.75%), Postives = 52/80 (65.00%), Query Frame = 1
Query:   22 QFLESNNLIDYSLLVGVHYTGQGQSQDFVEGGRYKP-FHKRCLGGLLSADGKEIYYIGIIDFLTTYTLRKKGETFAKRLL 258
            +FLE +NL DYSLLVG+H+  +           ++    K+  GG++SADG+E+Y+IGIID LT Y+L+K+ E   K +L
Sbjct:  122 KFLEQHNLCDYSLLVGIHFFEKDGPLPLKPDENHQTRLFKKDFGGIMSADGRELYFIGIIDTLTCYSLQKRSERALKIVL 201          
BLAST of mRNA_M-pyrifera_M_contig125932.5239.1 vs. uniprot
Match: A0A2P6NIK2_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NIK2_9EUKA)

HSP 1 Score: 70.5 bits (171), Expect = 2.890e-12
Identity = 33/77 (42.86%), Postives = 48/77 (62.34%), Query Frame = 1
Query:   19 AQFLESNNLIDYSLLVGVHYTGQGQSQDFVEGGRYKPFHKRCLGGLLSADGKEIYYIGIIDFLTTYTLRKKGETFAK 249
            ++F    N++DYSLL+ +H    G   D ++ G   PFH+R  GG+LS DG+E+Y+ GIID L  +  +KK E F K
Sbjct:  619 SEFFTRLNIMDYSLLLAIHNVTSGDPYDTIDQG---PFHRRTRGGVLSRDGREVYFFGIIDVLQLWDRKKKMERFFK 692          
BLAST of mRNA_M-pyrifera_M_contig125932.5239.1 vs. uniprot
Match: A0A7S1KM49_9EUKA (Hypothetical protein n=1 Tax=Percolomonas cosmopolitus TaxID=63605 RepID=A0A7S1KM49_9EUKA)

HSP 1 Score: 66.6 bits (161), Expect = 6.560e-11
Identity = 31/77 (40.26%), Postives = 47/77 (61.04%), Query Frame = 1
Query:   19 AQFLESNNLIDYSLLVGVHYTGQGQSQDFVEGGRYKPFHKRCLGGLLSADGKEIYYIGIIDFLTTYTLRKKGETFAK 249
            ++F +  N++DYSLL+GVH   + + Q  V+    +PFH+R   G+++ D K I Y+G+ID L  Y   KK E F K
Sbjct:  635 SEFFQKQNIMDYSLLLGVHKRNKSKRQKRVKEKIEEPFHRRFKNGMITWDHKYILYMGVIDILQEYNWNKKTERFLK 711          
BLAST of mRNA_M-pyrifera_M_contig125932.5239.1 vs. uniprot
Match: R1DWD1_EMIHU (PIPK domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DWD1_EMIHU)

HSP 1 Score: 66.2 bits (160), Expect = 8.660e-11
Identity = 41/96 (42.71%), Postives = 54/96 (56.25%), Query Frame = 1
Query:   13 DHAQFLESNNLIDYSLLVGVHYT-----GQGQSQDFV-------EGGRYKPFHKRCLGGLLSA--DGKEIYYIGIIDFLTTYTLRKKGETFAKRLL 258
            + A FL++NNLIDYSLLVGV  T     G  Q +D         +G    PFH+   GGL +A  +G E+Y +GIID L  + LRK+ E   KR +
Sbjct:  202 EDAAFLKANNLIDYSLLVGVTKTRYEIEGAAQRRDTAVVGSGPGDGAASAPFHRLDSGGLAAAYVEGAELYSMGIIDILQDFNLRKRAEYLIKRFV 297          
BLAST of mRNA_M-pyrifera_M_contig125932.5239.1 vs. uniprot
Match: UPI001CFC8B40 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFC8B40)

HSP 1 Score: 65.9 bits (159), Expect = 1.240e-10
Identity = 34/91 (37.36%), Postives = 53/91 (58.24%), Query Frame = 1
Query:   13 DHAQFLESNNLIDYSLLVGVHYTGQGQSQDF---------VEGGRYKPFHKRCLGGLLSAD-GKEIYYIGIIDFLTTYTLRKKGETFAKRL 255
            D  +FLE N +IDYSLLVG+H T + + +           +    ++ F++   GG+LS + G+EIY++ IID L  Y L+K+GE   K +
Sbjct:  940 DDTKFLERNEIIDYSLLVGIHETKKFREKPIHYQDPIYTTLPSSSFRTFYQEDYGGMLSTNQGEEIYFVAIIDILIQYGLKKRGENLIKTI 1030          
BLAST of mRNA_M-pyrifera_M_contig125932.5239.1 vs. uniprot
Match: D8M396_BLAHO (PIPK domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M396_BLAHO)

HSP 1 Score: 65.5 bits (158), Expect = 1.580e-10
Identity = 35/78 (44.87%), Postives = 48/78 (61.54%), Query Frame = 1
Query:   10 ADHAQFLESNNLIDYSLLVGVHYTGQGQSQDFVEG--GRYKPFHKRCLGGLLSADGKEIYYIGIIDFLTTYTLRKKGE 237
            A  +QFL    +IDYSLL+G+H   +G      +   GR+ PF +R  GGLLS DG ++YY+G+ID L  +  RK GE
Sbjct:  267 AKDSQFLAECGIIDYSLLLGIHNV-EGPLPPRAKSVYGRHVPFWQRDWGGLLSEDGTQVYYMGVIDILIHFNARKFGE 343          
BLAST of mRNA_M-pyrifera_M_contig125932.5239.1 vs. uniprot
Match: R1C8C1_EMIHU (PIPK domain-containing protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1C8C1_EMIHU)

HSP 1 Score: 65.1 bits (157), Expect = 2.300e-10
Identity = 41/96 (42.71%), Postives = 54/96 (56.25%), Query Frame = 1
Query:   13 DHAQFLESNNLIDYSLLVGVHYT-----GQGQSQDFV-------EGGRYKPFHKRCLGGLLSA--DGKEIYYIGIIDFLTTYTLRKKGETFAKRLL 258
            + A FL++NNLIDYSLLVGV  T     G  Q +D         +G    PFH+   GGL +A  +G E+Y +GIID L  + LRK+ E   KR +
Sbjct:  579 EDAAFLKANNLIDYSLLVGVTKTRYEIEGAAQRRDTAVVGSGPGDGVASAPFHRLDSGGLAAAYVEGAELYSMGIIDILQDFNLRKRAEYLIKRFV 674          
BLAST of mRNA_M-pyrifera_M_contig125932.5239.1 vs. uniprot
Match: A0A6A5BVJ9_NAEFO (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BVJ9_NAEFO)

HSP 1 Score: 63.5 bits (153), Expect = 8.070e-10
Identity = 34/90 (37.78%), Postives = 52/90 (57.78%), Query Frame = 1
Query:   13 DHAQFLESNNLIDYSLLVGVHYTGQGQSQD-------FVEGGRYKPFHKRCLGGLLSA--DGKEIYYIGIIDFLTTYTLRKKGETFAKRL 255
            D  +FLE N +IDYSLLVG+H T + + +        +      + F++   GG+LS   +G+EIY++ IID L  Y L+K+GE   K +
Sbjct:  925 DDTKFLEHNEIIDYSLLVGIHETKKFREKPIHYKDPIYSAPSPIRTFYQEDYGGMLSTHNNGEEIYFVAIIDILIQYGLKKRGENLIKTI 1014          
BLAST of mRNA_M-pyrifera_M_contig125932.5239.1 vs. uniprot
Match: L8GUI1_ACACA (Phorbol esters/diacylglycerol binding domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GUI1_ACACA)

HSP 1 Score: 63.2 bits (152), Expect = 1.110e-9
Identity = 33/85 (38.82%), Postives = 46/85 (54.12%), Query Frame = 1
Query:   22 QFLESNNLIDYSLLVGVHYTGQGQSQDFVEGGRYKPFH------KRCLGGLLSADGKEIYYIGIIDFLTTYTLRKKGETFAKRLL 258
            +++ + N+ DYS LVG+H      S         +  +      K  +GG+LSADG+EIYYI IID LT Y  +KKGE   K  +
Sbjct: 1208 RWMANLNICDYSFLVGIHSLASDDSMVVQSPATRRKLNTDPSAFKSFMGGVLSADGEEIYYIAIIDILTQYVFKKKGERLLKSFI 1292          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125932.5239.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2P6NMD2_9EUKA2.150e-1241.38Putative phosphatidylinositol-4-phosphate 5-kinase... [more]
A0A7S4MKD1_9EUKA2.160e-1243.75Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A2P6NIK2_9EUKA2.890e-1242.86Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A7S1KM49_9EUKA6.560e-1140.26Hypothetical protein n=1 Tax=Percolomonas cosmopol... [more]
R1DWD1_EMIHU8.660e-1142.71PIPK domain-containing protein n=1 Tax=Emiliania h... [more]
UPI001CFC8B401.240e-1037.36uncharacterized protein n=1 Tax=Naegleria lovanien... [more]
D8M396_BLAHO1.580e-1044.87PIPK domain-containing protein n=1 Tax=Blastocysti... [more]
R1C8C1_EMIHU2.300e-1042.71PIPK domain-containing protein n=3 Tax=Emiliania h... [more]
A0A6A5BVJ9_NAEFO8.070e-1037.78Uncharacterized protein n=1 Tax=Naegleria fowleri ... [more]
L8GUI1_ACACA1.110e-938.82Phorbol esters/diacylglycerol binding domain conta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig125932contigM-pyrifera_M_contig125932:37..294 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score66.6
Seed ortholog evalue6.4e-09
Seed eggNOG ortholog2903.EOD18830
KEGG rclassRC00002,RC00078
KEGG koko:K00889
KEGG ReactionR03469
KEGG Pathwayko00562,ko01100,ko04011,ko04070,ko04072,ko04139,ko04144,ko04666,ko04810,ko05231,map00562,map01100,map04011,map04070,map04072,map04139,map04144,map04666,map04810,map05231
KEGG ModuleM00130
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Translation initiation factor IF-2, N-terminal region
EggNOG OGsCOG5253@1,KOG0229@2759
EC2.7.1.68
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Exons1
Model size258
Cds size258
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815774.867247-CDS-M-pyrifera_M_contig125932:36..2941622815774.867247-CDS-M-pyrifera_M_contig125932:36..294Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig125932 37..294 +
1692277563.5186794-CDS-M-pyrifera_M_contig125932:36..2941692277563.5186794-CDS-M-pyrifera_M_contig125932:36..294Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig125932 37..294 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig125932.5239.1prot_M-pyrifera_M_contig125932.5239.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig125932 37..294 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig125932.5239.1

>prot_M-pyrifera_M_contig125932.5239.1 ID=prot_M-pyrifera_M_contig125932.5239.1|Name=mRNA_M-pyrifera_M_contig125932.5239.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=86bp
MSGADHAQFLESNNLIDYSLLVGVHYTGQGQSQDFVEGGRYKPFHKRCLG
GLLSADGKEIYYIGIIDFLTTYTLRKKGETFAKRLL
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mRNA from alignment at M-pyrifera_M_contig125932:37..294+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig125932.5239.1 ID=mRNA_M-pyrifera_M_contig125932.5239.1|Name=mRNA_M-pyrifera_M_contig125932.5239.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=258bp|location=Sequence derived from alignment at M-pyrifera_M_contig125932:37..294+ (Macrocystis pyrifera P11B4 male)
ATGAGCGGCGCTGACCATGCCCAGTTCCTTGAGAGTAACAATCTCATCGA CTACAGTCTCCTCGTTGGCGTTCACTACACTGGACAAGGACAGAGCCAAG ACTTCGTCGAAGGAGGCCGCTACAAACCCTTCCACAAGCGCTGCCTGGGT GGGCTGCTGTCTGCTGACGGGAAGGAGATCTACTACATTGGCATCATCGA CTTCCTGACAACATACACCCTTCGCAAGAAGGGAGAGACTTTTGCCAAGC GGCTTCTT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig125932:37..294+

>mRNA_M-pyrifera_M_contig125932.5239.1 ID=mRNA_M-pyrifera_M_contig125932.5239.1|Name=mRNA_M-pyrifera_M_contig125932.5239.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=516bp|location=Sequence derived from alignment at M-pyrifera_M_contig125932:37..294+ (Macrocystis pyrifera P11B4 male)
ATGAGCGGCGCTGACCATGCCCAGTTCCTTGAGAGTAACAATCTCATCGA
CTACAGTCTCCTCGTTGGCGTTCACTACACTGGACAAGGACAGAGCCAAG
ACTTCGTCGAAGGAGGCCGCTACAAACCCTTCCACAAGCGCTGCCTGGGT
GGGCTGCTGTCTGCTGACGGGAAGGAGATCTACTACATTGGCATCATCGA
CTTCCTGACAACATACACCCTTCGCAAGAAGGGAGAGACTTTTGCCAAGC
GGCTTCTTATGAGCGGCGCTGACCATGCCCAGTTCCTTGAGAGTAACAAT
CTCATCGACTACAGTCTCCTCGTTGGCGTTCACTACACTGGACAAGGACA
GAGCCAAGACTTCGTCGAAGGAGGCCGCTACAAACCCTTCCACAAGCGCT
GCCTGGGTGGGCTGCTGTCTGCTGACGGGAAGGAGATCTACTACATTGGC
ATCATCGACTTCCTGACAACATACACCCTTCGCAAGAAGGGAGAGACTTT
TGCCAAGCGGCTTCTT
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