mRNA_M-pyrifera_M_contig125824.5230.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig125824.5230.1 vs. uniprot
Match: A0A7X6AQZ0_9ACTN (Iron-sulfur cluster carrier protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6AQZ0_9ACTN) HSP 1 Score: 305 bits (780), Expect = 5.690e-101 Identity = 148/169 (87.57%), Postives = 158/169 (93.49%), Query Frame = 1
Query: 1 KITPLVREIGAGRLEIVSMGFLVAQQDSALMWRGLMLNRAVQHFCQDVAWSDDLDYLLIDMPPGTGDVQMGLAKMLPRAEMIIVTTPAGNAQKVAARVADMGRKNYLRIVGVIENMSEFVAPDGSRHALFGRGGGQALADDIGVPLLGSVPIEPGVSEGGDIGEPAALG 507
KITPLVRE+G GRLE+VSMGFLV ++DSALMWRGLMLNRAVQHFC+DVAWSDDLDYLLIDMPPGTGDVQMGLAKMLPRAEM+IVTTPA NAQKVAARVADMGRKNYLRIVGVIENMSEF APDGSRHALFG GGG+ LAD +GVPLLGS+PIEP VS GGD G+PA LG
Sbjct: 163 KITPLVREVGEGRLEVVSMGFLVEEEDSALMWRGLMLNRAVQHFCEDVAWSDDLDYLLIDMPPGTGDVQMGLAKMLPRAEMVIVTTPAANAQKVAARVADMGRKNYLRIVGVIENMSEFTAPDGSRHALFGAGGGRQLADAVGVPLLGSIPIEPAVSAGGDAGQPAVLG 331
BLAST of mRNA_M-pyrifera_M_contig125824.5230.1 vs. uniprot
Match: A0A3C0HN16_9ACTN (Sodium:proton antiporter (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C0HN16_9ACTN) HSP 1 Score: 298 bits (762), Expect = 5.900e-99 Identity = 149/170 (87.65%), Postives = 155/170 (91.18%), Query Frame = 1
Query: 1 KITPLVREIGAGRLEIVSMGFLVAQQDSALMWRGLMLNRAVQHFCQDVAWSDDLDYLLIDMPPGTGDVQMGLAKMLPRAEMIIVTTPAGNAQKVAARVADMGRKNYLRIVGVIENMSEFVAPDGSRHALFGRGGGQALADDIGVPLLGSVPIEPGVSEGGDIGEPAALGE 510
KI PLVREIG GRLE+VSMGFLV Q++SALMWRGLMLNRAVQHFCQDVAW DLDYLLIDMPPGTGDVQMGLAKMLPRAEM+IVTTPA NAQKVAARVADMG KNYLRIVGVIENMSEFVAPDGSRH+LFG GGGQ LADDIG PLLG VPIEP VS GD G+PAALGE
Sbjct: 175 KIQPLVREIGTGRLEVVSMGFLVDQENSALMWRGLMLNRAVQHFCQDVAWPSDLDYLLIDMPPGTGDVQMGLAKMLPRAEMLIVTTPALNAQKVAARVADMGAKNYLRIVGVIENMSEFVAPDGSRHSLFGEGGGQQLADDIGAPLLGQVPIEPAVSVNGDQGDPAALGE 344
BLAST of mRNA_M-pyrifera_M_contig125824.5230.1 vs. uniprot
Match: A0A6B1B0H9_9ACTN (Iron-sulfur cluster carrier protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1B0H9_9ACTN) HSP 1 Score: 296 bits (757), Expect = 1.530e-97 Identity = 145/169 (85.80%), Postives = 157/169 (92.90%), Query Frame = 1
Query: 1 KITPLVREIGAGRLEIVSMGFLVAQQDSALMWRGLMLNRAVQHFCQDVAWSDDLDYLLIDMPPGTGDVQMGLAKMLPRAEMIIVTTPAGNAQKVAARVADMGRKNYLRIVGVIENMSEFVAPDGSRHALFGRGGGQALADDIGVPLLGSVPIEPGVSEGGDIGEPAALG 507
KITPL+R++G+GRLEIVSMGFLVAQ+DSALMWRGLML+RAV+HFC+DVAWSDDLDYLLIDMPPGTGDVQMGLAK+LPRAEM+IVTTPA NAQKVAARVADMGRKNYLRIVGVIENM+ FVAPDGS H LFG GGGQ LADD+GVPLLGSVPIE VS GGD G PA LG
Sbjct: 175 KITPLIRKVGSGRLEIVSMGFLVAQEDSALMWRGLMLDRAVRHFCEDVAWSDDLDYLLIDMPPGTGDVQMGLAKLLPRAEMLIVTTPASNAQKVAARVADMGRKNYLRIVGVIENMTSFVAPDGSEHDLFGSGGGQQLADDVGVPLLGSVPIEAEVSVGGDSGSPAVLG 343
BLAST of mRNA_M-pyrifera_M_contig125824.5230.1 vs. uniprot
Match: A0A6B1EHG6_9ACTN (Iron-sulfur cluster carrier protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1EHG6_9ACTN) HSP 1 Score: 278 bits (712), Expect = 8.780e-91 Identity = 136/169 (80.47%), Postives = 149/169 (88.17%), Query Frame = 1
Query: 1 KITPLVREIGAGRLEIVSMGFLVAQQDSALMWRGLMLNRAVQHFCQDVAWSDDLDYLLIDMPPGTGDVQMGLAKMLPRAEMIIVTTPAGNAQKVAARVADMGRKNYLRIVGVIENMSEFVAPDGSRHALFGRGGGQALADDIGVPLLGSVPIEPGVSEGGDIGEPAALG 507
KI PL R++G GRLE+VSMGFLV ++DSALMWRGLMLNRAVQHFC+DV WSDDLDYLLIDMPPGTGDVQMGLAKMLPRAEMIIVTTPA AQKVAARVADMGRKNYLRIVGV+ENMS V PDG A+FG GGG+ALA +IG PLLG VP++P V+EG DIGEPA LG
Sbjct: 174 KIVPLTRDVGEGRLEVVSMGFLVDREDSALMWRGLMLNRAVQHFCEDVRWSDDLDYLLIDMPPGTGDVQMGLAKMLPRAEMIIVTTPAVAAQKVAARVADMGRKNYLRIVGVVENMSYLVTPDGEHQAVFGSGGGEALAAEIGAPLLGRVPLDPAVAEGSDIGEPAVLG 342
BLAST of mRNA_M-pyrifera_M_contig125824.5230.1 vs. uniprot
Match: A0A2E0T349_9ACTN (Iron-sulfur cluster carrier protein n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0T349_9ACTN) HSP 1 Score: 275 bits (703), Expect = 1.390e-88 Identity = 141/170 (82.94%), Postives = 144/170 (84.71%), Query Frame = 1
Query: 1 KITPLVREIGAGRLEIVSMGFLVAQQDSALMWRGLMLNRAVQHFCQDVAWSDDLDYLLIDMPPGTGDVQMGLAKMLPRAEMIIVTTPAGNAQKVAARVADMGRKNYLRIVGVIENMSEFVAPDGSRHALFGRGGGQALADDIGVPLLGSVPIEPGVSEGGDIGEPAALGE 510
KI PLVREIG GRLE+VSMGFLV + SALMWRGLML RAVQHFCQDVAW DLDYLLIDMPPGTGDVQMGLAKMLPRAEM IVTTPA NAQ VAARVADMG K YLRI GVIENM EFVAPDGSRH LFG GGGQ LADDIG PLLG VPI P VS G G+PAALGE
Sbjct: 209 KIQPLVREIGXGRLEVVSMGFLVDXEXSALMWRGLMLXRAVQHFCQDVAWPSDLDYLLIDMPPGTGDVQMGLAKMLPRAEMXIVTTPALNAQXVAARVADMGAKXYLRIXGVIENMXEFVAPDGSRHXLFGEGGGQQLADDIGXPLLGXVPIXPAVSVNGXQGDPAALGE 378
BLAST of mRNA_M-pyrifera_M_contig125824.5230.1 vs. uniprot
Match: A0A7K2E473_9ACTN (Iron-sulfur cluster carrier protein n=9 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2E473_9ACTN) HSP 1 Score: 268 bits (685), Expect = 6.220e-86 Identity = 130/170 (76.47%), Postives = 146/170 (85.88%), Query Frame = 1
Query: 1 KITPLVREIGAGRLEIVSMGFLVAQQDSALMWRGLMLNRAVQHFCQDVAWSDDLDYLLIDMPPGTGDVQMGLAKMLPRAEMIIVTTPAGNAQKVAARVADMGRKNYLRIVGVIENMSEFVAPDGSRHALFGRGGGQALADDIGVPLLGSVPIEPGVSEGGDIGEPAALGE 510
KI PL R +G GRL++VSMGFLV ++DSALMWRGLMLNRAVQHFC+DV WSDDLDYLLIDMPPGTGDVQMGLA+MLPRAEMIIVTTPA AQKVAARV DMGRKNYLRIVGVIENMS DG HA+FG GGG+ALA ++GVPLLG +P+E V++G D GEPA LG+
Sbjct: 238 KIVPLTRTVGEGRLDVVSMGFLVDREDSALMWRGLMLNRAVQHFCEDVRWSDDLDYLLIDMPPGTGDVQMGLARMLPRAEMIIVTTPATAAQKVAARVVDMGRKNYLRIVGVIENMSYLATGDGEHHAVFGSGGGEALAAEVGVPLLGRIPLEAAVADGADRGEPAVLGD 407
BLAST of mRNA_M-pyrifera_M_contig125824.5230.1 vs. uniprot
Match: A0A2E9W2H1_9ACTN (Sodium:proton antiporter (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A2E9W2H1_9ACTN) HSP 1 Score: 253 bits (646), Expect = 3.390e-83 Identity = 123/169 (72.78%), Postives = 144/169 (85.21%), Query Frame = 1
Query: 1 KITPLVREIGAGRLEIVSMGFLVAQQDSALMWRGLMLNRAVQHFCQDVAWSDDLDYLLIDMPPGTGDVQMGLAKMLPRAEMIIVTTPAGNAQKVAARVADMGRKNYLRIVGVIENMSEFVAPDGSRHALFGRGGGQALADDIGVPLLGSVPIEPGVSEGGDIGEPAALG 507
KI P+ +G G L++VSMGFLV ++++ALMWRGLMLNRAVQHFC+DVAW +DYLLIDMPPGTGDVQMGLA+MLPR+EMIIVTTPA AQKVA RVA MGR N+LRIVGVIENM FVAPDG H LFG+GGG+ALADDIG PLLGS+P++ V++GGD G+P ALG
Sbjct: 3 KIDPIQMPVGEGLLKVVSMGFLVEREETALMWRGLMLNRAVQHFCEDVAWGP-MDYLLIDMPPGTGDVQMGLARMLPRSEMIIVTTPALAAQKVAVRVAGMGRNNFLRIVGVIENMGAFVAPDGQEHLLFGKGGGRALADDIGAPLLGSIPLDVAVAQGGDTGQPVALG 170
BLAST of mRNA_M-pyrifera_M_contig125824.5230.1 vs. uniprot
Match: A0A2E8LEU6_9ACTN (Iron-sulfur cluster carrier protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8LEU6_9ACTN) HSP 1 Score: 256 bits (654), Expect = 6.870e-82 Identity = 125/170 (73.53%), Postives = 143/170 (84.12%), Query Frame = 1
Query: 1 KITPLVREIGAGRLEIVSMGFLVAQQDSALMWRGLMLNRAVQHFCQDVAWSDDLDYLLIDMPPGTGDVQMGLAKMLPRAEMIIVTTPAGNAQKVAARVADMGRKNYLRIVGVIENMSEFVAPDGSRHALFGRGGGQALADDIGVPLLGSVPIEPGVSEGGDIGEPAALGE 510
KITP+ +++GAG LE+VSMGFLV +++ALMWRGL+LNRAVQHFC+DVAW D LDYLLIDMPPGTGDVQMGLAKMLPRAEM+IVTTPA AQKVA RVA MGR NYLRIVGV+ENMS +V PDG H LFG GGG LA+ IG PLLGS+PI+ V+ GGD G+P LGE
Sbjct: 187 KITPITKQVGAGHLEVVSMGFLVEGEETALMWRGLILNRAVQHFCEDVAWGD-LDYLLIDMPPGTGDVQMGLAKMLPRAEMLIVTTPALAAQKVAVRVAHMGRNNYLRIVGVVENMSAYVTPDGESHELFGAGGGSDLAERIGAPLLGSIPIDAAVAAGGDAGKPVVLGE 355
BLAST of mRNA_M-pyrifera_M_contig125824.5230.1 vs. uniprot
Match: A0A7Y2GT44_9ACTN (Iron-sulfur cluster carrier protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GT44_9ACTN) HSP 1 Score: 256 bits (653), Expect = 7.280e-82 Identity = 125/170 (73.53%), Postives = 143/170 (84.12%), Query Frame = 1
Query: 1 KITPLVREIGAGRLEIVSMGFLVAQQDSALMWRGLMLNRAVQHFCQDVAWSDDLDYLLIDMPPGTGDVQMGLAKMLPRAEMIIVTTPAGNAQKVAARVADMGRKNYLRIVGVIENMSEFVAPDGSRHALFGRGGGQALADDIGVPLLGSVPIEPGVSEGGDIGEPAALGE 510
KITPL E GAGRL++VSMGFLV ++SAL+WRGLMLNRAVQHF +DVAW+ DLDY++IDMPPGTGDV MGLA+MLPRAEM+IVTTPA AQKVAAR M RK++LR+VGVIENMSEF APDGS HALFG GGGQALAD VPL+G +PIEP +S GGD G P AL +
Sbjct: 179 KITPLSLEAGAGRLDVVSMGFLVDDEESALLWRGLMLNRAVQHFLEDVAWASDLDYVVIDMPPGTGDVAMGLARMLPRAEMLIVTTPAQGAQKVAARAVSMARKSHLRVVGVIENMSEFTAPDGSVHALFGSGGGQALADMANVPLVGRIPIEPAISSGGDEGVPVALAD 348
BLAST of mRNA_M-pyrifera_M_contig125824.5230.1 vs. uniprot
Match: A0A355DG62_9ACTN (Iron-sulfur cluster carrier protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A355DG62_9ACTN) HSP 1 Score: 256 bits (653), Expect = 1.000e-81 Identity = 125/170 (73.53%), Postives = 145/170 (85.29%), Query Frame = 1
Query: 1 KITPLVREIGAGRLEIVSMGFLVAQQDSALMWRGLMLNRAVQHFCQDVAWSDDLDYLLIDMPPGTGDVQMGLAKMLPRAEMIIVTTPAGNAQKVAARVADMGRKNYLRIVGVIENMSEFVAPDGSRHALFGRGGGQALADDIGVPLLGSVPIEPGVSEGGDIGEPAALGE 510
KI P+ +G G L+IVSMGFLV ++++ALMWRGLMLNRAV+HFC+DVAW + +DYLLIDMPPGTGDVQMGLAKMLPRAEM+IVTTPA AQKVA RVA+MGR NYLR+VGVIENMS +V PDG HALFGRGGG ALA DIGVPLLGS+P++ V+ GGD G P A+GE
Sbjct: 190 KINPIEMPVGPGLLKIVSMGFLVEREETALMWRGLMLNRAVRHFCEDVAWGE-MDYLLIDMPPGTGDVQMGLAKMLPRAEMVIVTTPALAAQKVAVRVANMGRSNYLRVVGVIENMSAYVTPDGEEHALFGRGGGSALAADIGVPLLGSIPLDGAVALGGDTGRPVAIGE 358 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125824.5230.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig125824.5230.1 >prot_M-pyrifera_M_contig125824.5230.1 ID=prot_M-pyrifera_M_contig125824.5230.1|Name=mRNA_M-pyrifera_M_contig125824.5230.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=170bp KITPLVREIGAGRLEIVSMGFLVAQQDSALMWRGLMLNRAVQHFCQDVAWback to top mRNA from alignment at M-pyrifera_M_contig125824:2..511- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig125824.5230.1 ID=mRNA_M-pyrifera_M_contig125824.5230.1|Name=mRNA_M-pyrifera_M_contig125824.5230.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=510bp|location=Sequence derived from alignment at M-pyrifera_M_contig125824:2..511- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig125824:2..511- >mRNA_M-pyrifera_M_contig125824.5230.1 ID=mRNA_M-pyrifera_M_contig125824.5230.1|Name=mRNA_M-pyrifera_M_contig125824.5230.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1020bp|location=Sequence derived from alignment at M-pyrifera_M_contig125824:2..511- (Macrocystis pyrifera P11B4 male)back to top |