mRNA_M-pyrifera_M_contig12581.5225.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig12581.5225.1
Unique NamemRNA_M-pyrifera_M_contig12581.5225.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig12581.5225.1 vs. uniprot
Match: D7FL45_ECTSI (Plastoquinol--plastocyanin reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL45_ECTSI)

HSP 1 Score: 330 bits (846), Expect = 1.310e-112
Identity = 156/191 (81.68%), Postives = 171/191 (89.53%), Query Frame = 1 
Query:    4 QTNAAARASTRPMKMSAADDAFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGSGGSGGGVIAKDAIGSEVTTDSWLATHGVGSRELAEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKVVRGPAPLSLALSHVEENDGKVVFKQWSETDFRNGEKPWW 576
            Q   A+RA+++ MKMS+ ++ FVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVP        GV AKDAIG+EVT +SWLATHGVGSRELAEGIKGDATYLVVTEDKK+QDYGIVAVCTHLGCVVPWNKAENKF+CPCHGSQYD TGKV+RGPAPLSLALSHVEE DGKV+FK+W ETDFR G+KPWW
Sbjct:   34 QRPTASRATSKAMKMSSNEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVIFKEWKETDFRTGDKPWW 224
[Close]
BLAST of mRNA_M-pyrifera_M_contig12581.5225.1 vs. uniprot
Match: A0A835YPA4_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPA4_9STRA)

HSP 1 Score: 296 bits (758), Expect = 3.020e-99
Identity = 138/177 (77.97%), Postives = 153/177 (86.44%), Query Frame = 1 
Query:   46 MSAADDAFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGSGGSGGGVIAKDAIGSEVTTDSWLATHGVGSRELAEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKVVRGPAPLSLALSHVEENDGKVVFKQWSETDFRNGEKPWW 576
            MSAA+DAFVPDM+RR AMNLILAGS GV VLGLAVPYIAFFVP  +G +GGGVIA+DA+G +VT + WL TH  GSREL EGIKGDATYL V +DK IQD+GIVAVCTHLGCVVPW +AENKFICPCHGSQY+A GKVVRGPAPLSLALSH++   GKVVFK W+ETDFR GE PWW
Sbjct:   45 MSAAEDAFVPDMNRRVAMNLILAGSAGVVVLGLAVPYIAFFVPKSAGNAGGGVIARDAVGQDVTVEGWLGTHLPGSRELVEGIKGDATYLTVKQDKTIQDFGIVAVCTHLGCVVPWVQAENKFICPCHGSQYNADGKVVRGPAPLSLALSHIDTESGKVVFKPWTETDFRTGEAPWW 221
[Close]
BLAST of mRNA_M-pyrifera_M_contig12581.5225.1 vs. uniprot
Match: A0A836CBH8_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBH8_9STRA)

HSP 1 Score: 295 bits (755), Expect = 8.640e-99
Identity = 136/179 (75.98%), Postives = 155/179 (86.59%), Query Frame = 1 
Query:   40 MKMSAADDAFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGSGGSGGGVIAKDAIGSEVTTDSWLATHGVGSRELAEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKVVRGPAPLSLALSHVEENDGKVVFKQWSETDFRNGEKPWW 576
            +KMSAA+DAFVPDM+RR AMN ILAGS GV VLGLA+PYI+FFVP  +GG+GGGVIA+DA+G +VT + W+ATH  GSREL EGIKGDATYL V +DK IQD+GIVAVCTHLGCVVPW +AENKFICPCHGSQY+  GKVVRGPAPLSLALSH+E + G VVFK W+ETDFR GE PWW
Sbjct:   43 IKMSAAEDAFVPDMNRRVAMNAILAGSAGVVVLGLAIPYISFFVPKSAGGAGGGVIARDAVGQDVTVEGWVATHLPGSRELVEGIKGDATYLTVKQDKTIQDFGIVAVCTHLGCVVPWVQAENKFICPCHGSQYNMDGKVVRGPAPLSLALSHIETDTGNVVFKPWTETDFRTGEAPWW 221
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BLAST of mRNA_M-pyrifera_M_contig12581.5225.1 vs. uniprot
Match: A0A7S1U2M5_9STRA (Plastoquinol--plastocyanin reductase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2M5_9STRA)

HSP 1 Score: 285 bits (728), Expect = 1.450e-93
Identity = 127/185 (68.65%), Postives = 150/185 (81.08%), Query Frame = 1 
Query:   22 RASTRPMKMSAADDAFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGSGGSGGGVIAKDAIGSEVTTDSWLATHGVGSRELAEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKVVRGPAPLSLALSHVEENDGKVVFKQWSETDFRNGEKPWW 576
            RA  R M M+A++DAFVPDMDRR  MN IL  S+GV  LG+AVPYI+FFVP GSGG G G IAKDA+G++VT   WL TH  G+REL +G+KGDATYL+V +DK +++YG+ AVCTHLGCVVPWN A+ KF+CPCHGSQY+  GKVVRGPAPLSLAL+HVE  DGKVVF  W+ETDFR GE PWW
Sbjct:  114 RAGRRAMTMAASEDAFVPDMDRRNVMNAILTASVGVAGLGMAVPYISFFVPAGSGGGGSGTIAKDALGNDVTESGWLGTHNAGARELVQGLKGDATYLIVNDDKTLENYGLSAVCTHLGCVVPWNAAQGKFMCPCHGSQYNKEGKVVRGPAPLSLALAHVENKDGKVVFTPWTETDFRTGEAPWW 298
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BLAST of mRNA_M-pyrifera_M_contig12581.5225.1 vs. uniprot
Match: W7TXJ0_9STRA (Plastoquinol--plastocyanin reductase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXJ0_9STRA)

HSP 1 Score: 275 bits (703), Expect = 1.160e-90
Identity = 123/179 (68.72%), Postives = 145/179 (81.01%), Query Frame = 1 
Query:   40 MKMSAADDAFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGSGGSGGGVIAKDAIGSEVTTDSWLATHGVGSRELAEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKVVRGPAPLSLALSHVEENDGKVVFKQWSETDFRNGEKPWW 576
            M  +  ++ FVPDMDRR  MN IL GS+G+NV GLAVPYIAFFVP   GG+GGG+ AKDA+G +VT   WL+TH  G R L +G+KGDATYL+V EDK I++YG+ AVCTHLGCVVPWNKAE+KFICPCHGSQYD TGKVVRGPAPLSLAL+HV+E+DGKV+   W+ETDFR    PWW
Sbjct:   58 MAEAVGEEPFVPDMDRRKLMNTILLGSVGLNVAGLAVPYIAFFVPRTGGGAGGGLAAKDALGDDVTVQGWLSTHQAGDRSLVQGLKGDATYLIVKEDKTIENYGLNAVCTHLGCVVPWNKAESKFICPCHGSQYDKTGKVVRGPAPLSLALAHVKESDGKVLLTPWTETDFRTDTAPWW 236
[Close]
BLAST of mRNA_M-pyrifera_M_contig12581.5225.1 vs. uniprot
Match: A0A835ZDT9_9STRA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT9_9STRA)

HSP 1 Score: 266 bits (680), Expect = 1.320e-87
Identity = 125/182 (68.68%), Postives = 145/182 (79.67%), Query Frame = 1 
Query:   46 MSAADDAFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPP-GSGGSGGGVIAKDAIGSEVTTDSWLATHGVGSRELAEGIKGDATYLVVTED----KKIQDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKVVRGPAPLSLALSHVEENDGKVVFKQWSETDFRNGEKPWW 576
            MSAAD+A+VPDM RR A+NLIL    GV VLGLA+PY+A FVP    GG  G V+A+DA+G EVT++ WLATH  GSREL EG+KGDATYL+V +D    K I+D GIVAVCTH+GCVVPWN AENKFICPCH SQYDA G+VVRGPAPLSLALSHV+   GKV+ + W+ETDFR GE PWW
Sbjct:   26 MSAADEAYVPDMGRRQALNLILVSFTGVTVLGLAIPYVALFVPKHAEGGRSGSVVARDALGQEVTSEGWLATHLPGSRELVEGMKGDATYLIVDKDELHGKAIRDLGIVAVCTHMGCVVPWNAAENKFICPCHASQYDANGRVVRGPAPLSLALSHVDTGSGKVLLRPWTETDFRTGEAPWW 207
[Close]
BLAST of mRNA_M-pyrifera_M_contig12581.5225.1 vs. uniprot
Match: A0A7S2V1Z6_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Z6_9STRA)

HSP 1 Score: 263 bits (672), Expect = 1.880e-85
Identity = 114/173 (65.90%), Postives = 135/173 (78.03%), Query Frame = 1 
Query:   58 DDAFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGSGGSGGGVIAKDAIGSEVTTDSWLATHGVGSRELAEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKVVRGPAPLSLALSHVEENDGKVVFKQWSETDFRNGEKPWW 576
            DD F+PDM RR  MNL+LAG++G+NV    +PY+ FFVPP  GG      A DA+GSE+  D WL TH  G R L +G+KGDATYL+VTE+  I+ YG+ AVCTHLGCVVPWNKA NKFICPCHGSQYD+TGKVVRGPAPLSLAL+HVE +DGK+VF+ W+E DFR G  PWW
Sbjct:   99 DDKFIPDMGRRKLMNLLLAGTVGLNVAAFGLPYVYFFVPPKQGGGSSSTNALDALGSEIKADQWLETHQTGDRSLVQGLKGDATYLIVTEENAIESYGLNAVCTHLGCVVPWNKAANKFICPCHGSQYDSTGKVVRGPAPLSLALAHVENDDGKIVFETWTEKDFRTGLDPWW 271
[Close]
BLAST of mRNA_M-pyrifera_M_contig12581.5225.1 vs. uniprot
Match: Q20BN1_PANGI (Plastoquinol--plastocyanin reductase n=1 Tax=Panax ginseng TaxID=4054 RepID=Q20BN1_PANGI)

HSP 1 Score: 255 bits (651), Expect = 1.560e-83
Identity = 114/170 (67.06%), Postives = 133/170 (78.24%), Query Frame = 1 
Query:   70 VPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGSGGSGGGVIAKDAIGSEVTTDSWLATHGVGSRELAEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKVVRGPAPLSLALSHVEENDGKVVFKQWSETDFRNGEKPWWS 579
            VPDM++R  MNL+L G++ +   G+ VPY  FFVPPGSG  GGG  AKDA+G++V    WL THG G R L EG+KGD TYLVV  DK++  YGI AVCTHLGCVVPWNKAENKF+CPCHGSQY+  GKVVRGPAPLSLAL+H + +DGKVVF  W+ETDFR GE PWWS
Sbjct:   15 VPDMEKRKLMNLLLLGALSLPSAGMLVPYANFFVPPGSGAGGGGTTAKDALGNDVIATEWLKTHGPGDRTLTEGLKGDPTYLVVEADKQLATYGINAVCTHLGCVVPWNKAENKFMCPCHGSQYNNQGKVVRGPAPLSLALAHADIDDGKVVFVPWTETDFRTGEDPWWS 184
[Close]
BLAST of mRNA_M-pyrifera_M_contig12581.5225.1 vs. uniprot
Match: A0A804KNF8_MUSAM (Plastoquinol--plastocyanin reductase n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804KNF8_MUSAM)

HSP 1 Score: 255 bits (652), Expect = 4.810e-83
Identity = 112/170 (65.88%), Postives = 134/170 (78.82%), Query Frame = 1 
Query:   70 VPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGSGGSGGGVIAKDAIGSEVTTDSWLATHGVGSRELAEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKVVRGPAPLSLALSHVEENDGKVVFKQWSETDFRNGEKPWWS 579
            VPDM +R  +NL+L G++ +   G+ +PY  FFVPPGSGG+GGG +AKDA+G++VT D WL THG G R L +G+KGD TYLVV  DK +  YGI AVCTHLGCVVPWN AE KFICPCHGSQY+  G+VVRGPAPLSLAL+HV+ +DGKVVF  W ETDFR GE PWW+
Sbjct:   59 VPDMGKRQLLNLLLLGTLSLPTAGMLIPYTYFFVPPGSGGAGGGTVAKDALGNDVTLDGWLKTHGPGDRTLTQGLKGDPTYLVVENDKTLATYGINAVCTHLGCVVPWNAAEKKFICPCHGSQYNNQGRVVRGPAPLSLALAHVDVDDGKVVFVPWVETDFRTGEDPWWA 228
[Close]
BLAST of mRNA_M-pyrifera_M_contig12581.5225.1 vs. uniprot
Match: A0A2G9GB00_9LAMI (Plastoquinol--plastocyanin reductase n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9GB00_9LAMI)

HSP 1 Score: 254 bits (648), Expect = 1.650e-82
Identity = 113/175 (64.57%), Postives = 138/175 (78.86%), Query Frame = 1 
Query:   55 ADDAFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGSGGSGGGVIAKDAIGSEVTTDSWLATHGVGSRELAEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKVVRGPAPLSLALSHVEENDGKVVFKQWSETDFRNGEKPWWS 579
            ADD  VPDM++R  MNL+L G++ +  +G+  PY  FFVPPG+GG+GGG +AKDA+G++V  D WL  HG G R LA+G+KGD TYLVV +D+ +  YGI AVCTHLGCVVPWN AENKFICPCHGSQY+  G+VVRGPAPLSLAL+H + +DGKVVF  W ETDFR GE PWW+
Sbjct:   50 ADDR-VPDMEKRQLMNLLLLGALSLPTVGMLYPYTYFFVPPGAGGAGGGTVAKDALGNDVLADEWLKNHGPGDRTLAQGLKGDPTYLVVEKDRTLATYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEDPWWA 223
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12581.5225.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL45_ECTSI1.310e-11281.68Plastoquinol--plastocyanin reductase n=2 Tax=Ectoc... [more]
A0A835YPA4_9STRA3.020e-9977.97Plastoquinol--plastocyanin reductase n=1 Tax=Tribo... [more]
A0A836CBH8_9STRA8.640e-9975.98Plastoquinol--plastocyanin reductase n=1 Tax=Tribo... [more]
A0A7S1U2M5_9STRA1.450e-9368.65Plastoquinol--plastocyanin reductase n=2 Tax=Phaeo... [more]
W7TXJ0_9STRA1.160e-9068.72Plastoquinol--plastocyanin reductase n=2 Tax=Monod... [more]
A0A835ZDT9_9STRA1.320e-8768.68Cytochrome b6-f complex iron-sulfur subunit, chlor... [more]
A0A7S2V1Z6_9STRA1.880e-8565.90Plastoquinol--plastocyanin reductase n=1 Tax=Fibro... [more]
Q20BN1_PANGI1.560e-8367.06Plastoquinol--plastocyanin reductase n=1 Tax=Panax... [more]
A0A804KNF8_MUSAM4.810e-8365.88Plastoquinol--plastocyanin reductase n=1 Tax=Musa ... [more]
A0A2G9GB00_9LAMI1.650e-8264.57Plastoquinol--plastocyanin reductase n=1 Tax=Handr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12581contigM-pyrifera_M_contig12581:2587..8865 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score323.9
Seed ortholog evalue4.6e-86
Seed eggNOG ortholog2880.D7FL45
Preferred namePETC
KEGG rclassRC01002
KEGG koko:K02636
KEGG ReactionR03817,R08409
KEGG Pathwayko00195,ko01100,map00195,map01100
KEGG ModuleM00162
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006091,GO:0006950,GO:0006952,GO:0008150,GO:0008152,GO:0009055,GO:0009314,GO:0009416,GO:0009507,GO:0009512,GO:0009526,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009767,GO:0009941,GO:0009987,GO:0010196,GO:0015979,GO:0016020,GO:0016491,GO:0019684,GO:0022900,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0032991,GO:0034357,GO:0042651,GO:0042742,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0046028,GO:0050896,GO:0051704,GO:0051707,GO:0055035,GO:0055114,GO:0070069,GO:0071944,GO:0080167,GO:0098542,GO:1990066
EggNOG free text desc.oxidoreductase activity, acting on diphenols and related substances as donors
EggNOG OGsCOG0723@1,KOG1671@2759
Ec32 ortholog descriptionCytochrome b6-f complex iron-sulfur subunit
Ec32 orthologEc-05_006690.1
EC1.10.9.1
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00194,ko01000
Exons4
Model size668
Cds size543
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12581.5225.1prot_M-pyrifera_M_contig12581.5225.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig12581 2673..8826 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815774.0830321-UTR-M-pyrifera_M_contig12581:2586..26721622815774.0830321-UTR-M-pyrifera_M_contig12581:2586..2672Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig12581 2587..2672 -
1692277563.0720599-UTR-M-pyrifera_M_contig12581:2586..26721692277563.0720599-UTR-M-pyrifera_M_contig12581:2586..2672Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig12581 2587..2672 -
1622815774.1779294-UTR-M-pyrifera_M_contig12581:8826..88651622815774.1779294-UTR-M-pyrifera_M_contig12581:8826..8865Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig12581 8827..8865 -
1692277563.146859-UTR-M-pyrifera_M_contig12581:8826..88651692277563.146859-UTR-M-pyrifera_M_contig12581:8826..8865Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig12581 8827..8865 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815774.0935605-CDS-M-pyrifera_M_contig12581:2672..27181622815774.0935605-CDS-M-pyrifera_M_contig12581:2672..2718Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12581 2673..2718 -
1692277563.0858727-CDS-M-pyrifera_M_contig12581:2672..27181692277563.0858727-CDS-M-pyrifera_M_contig12581:2672..2718Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12581 2673..2718 -
1622815774.135264-CDS-M-pyrifera_M_contig12581:3598..36781622815774.135264-CDS-M-pyrifera_M_contig12581:3598..3678Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12581 3599..3678 -
1692277563.103445-CDS-M-pyrifera_M_contig12581:3598..36781692277563.103445-CDS-M-pyrifera_M_contig12581:3598..3678Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12581 3599..3678 -
1622815774.1486804-CDS-M-pyrifera_M_contig12581:4846..50051622815774.1486804-CDS-M-pyrifera_M_contig12581:4846..5005Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12581 4847..5005 -
1692277563.1139865-CDS-M-pyrifera_M_contig12581:4846..50051692277563.1139865-CDS-M-pyrifera_M_contig12581:4846..5005Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12581 4847..5005 -
1622815774.1623461-CDS-M-pyrifera_M_contig12581:8568..88261622815774.1623461-CDS-M-pyrifera_M_contig12581:8568..8826Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12581 8569..8826 -
1692277563.131933-CDS-M-pyrifera_M_contig12581:8568..88261692277563.131933-CDS-M-pyrifera_M_contig12581:8568..8826Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12581 8569..8826 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig12581.5225.1

>prot_M-pyrifera_M_contig12581.5225.1 ID=prot_M-pyrifera_M_contig12581.5225.1|Name=mRNA_M-pyrifera_M_contig12581.5225.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=181bp
MKMSAADDAFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGSGG
SGGGVIAKDAIGSEVTTDSWLATHGVGSRELAEGIKGDATYLVVTEDKKI
QDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKVVRGPAPLSLA
LSHVEENDGKVVFKQWSETDFRNGEKPWWS*
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mRNA from alignment at M-pyrifera_M_contig12581:2587..8865-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig12581.5225.1 ID=mRNA_M-pyrifera_M_contig12581.5225.1|Name=mRNA_M-pyrifera_M_contig12581.5225.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6279bp|location=Sequence derived from alignment at M-pyrifera_M_contig12581:2587..8865- (Macrocystis pyrifera P11B4 male)
TCTCAGACCAACGCCGCGGCGAGGGCCTCGACGAGGCCGATGAAGATGTC
GGCAGCAGACGACGCGTTCGTGCCCGACATGGACCGCCGTACCGCCATGA
ACCTCATCCTCGCGGGCTCCATCGGCGTCAACGTGCTCGGCCTGGCCGTC
CCGTACATCGCTTTCTTCGTGCCCCCTGGCAGCGGTGGCAGCGGGGGGGG
CGTTATCGCAAAGGACGCCATCGGCAGCGAGGTGACCACCGACAGCTGGT
TGGCCACGCACGGGGTGGGGTCCAGGGAGCTCGCTGAGGGCATCAAGGTA
AGATGTTGCTAACACCTGGAAACGTGGGTCACCCTGACTTGAGAGAGAGG
TGTGGTGGCGTGGTGCAAGCCGAACACACCTCTCTTTGTACTATTTCGGG
GGGCCACAGTTAATAGGACCTACGATACACACAAAAACCTATATATATAT
TTACCTGTTTTTGCTAACAATAGTTGGTCCTATTTACTATGGTCCCCCGT
AATACAGTGTCGTCCTCTCTTATCCAATCCACAGGAAGAAATATATTATT
TGTTCGTAGCTTTGGTGTAGGCAGTTCCAGTCAATTTTGTCTCTCTTGAC
TGTGCGTTCTCTCTTCAGCAGTGGTACCTACTGTATGTACTGTACCCACT
GCTGTCACTTAATACACATTGTGAAACCTCTCTTGCGGGACTGAACTCCA
CTGCGTATTGGGCATGAATTACTTGAAATTATAAGATGTATACATGTGTG
TGTTTACAGCGCAGTTTTGAAAGGGCTGAATTAAGAACGTCAGCGTTTGT
TTTTAGACATTGTCTGCTTGGAATTTGTGTGGAACACTTTTTTCGGCATA
CCAGGTATGGTTTTAAGGGTTGAGATCATTGATTGGTTCTGGTGGTTGAC
TTGGTGGTTTTGGAGGTCGGCTTTGATAGTGCTGATTCATTGTGTTGCTT
CATTTTGGGTATTGTGGCCGTTTCGTTGGTAGGCCTTCAGTGAAAGGAAC
CCGCAACAGACTATAAGGTAGGCCGGGGATTTTTGCAGAAACCAAAAAAA
AAACTGGAGTGGTTAATGCTCGAAGTTGGTGTCAATTGTTGGAATTTGTC
TCTTCCTGAAGTTATTTTCTCGTTATATTTTGGGATTATCTACGGGCAGT
GGAATCAAGATAGAGAGATATCTGGTATGATATTGGGATTGCCGTGTCTT
ACGGGAAAAAAAAAATGAATTTTGAGAAATGTGTCCGAAACTGTGTTTTC
TGCTTGCTTTTTCGTGTTCTAAGAAGCAAGAGTCTGACCGACACCTTGAC
AATTGTAAATGATGAGAATTGGGATGGCCGTTTTGCCCTGGCAACGAATT
ATGATGGAATTTGAGATGTGCCGCTTCACCTGACAATCTGTTACTGTTCG
GAAGCTGTGGTGTTTTGCACCGATTGGAGGGGCTCTTTGCGAGAGTGTGG
TGTTTGATTCTGGTCTTGTTAGTAGATTTGGGGTTTCCATTGTGTGTGGC
GTGTCATTGCTGTTCTGAGGTGTTCCTGTGGATGCTTTGTCCTCTGGGCA
TGGCTTGCCCTCCAGGGTTAGTCGCTCAAGGGTTAGTCGATGGGATTTGT
CCGATGCGATCCGGATCTGTGATCTAACGATACTGGCCGTGTGTCGTACA
GTAGATACGTGTGGCTTGAGCCTGCGGGCGACAACAAGATACGACTCACT
CTTGTGTTCTGCGCGGGTGCAGCCTCAAGGTACGGCTCACTTCTTTTTTT
TTGCAATGTGAGCCGTACCTTGAGGCTGCACACAGAGTACAGGCCGTATA
TACCCACACATACTGTTTATATTGAGGCAGTATCGTTGTACCAGGGTATG
ACAGACCAAGGCCGTATCGTATTGCCAATCTTGCTAGTACGGGGGTCCAT
AGTTAATAGGACCTATGGTCTATATGAAAACCTATATAGTTACCTATTTT
TGCTAACAATATTTGGTCCTGTTTACTATGGTGCCCCGTAATAGTACACT
ATTAATAGTACCTTCAACTATAACCCTGAAGGGCAAATGCTGTACCCAGA
GGCCGAAGCATTCGCAGGAACACCTTACAACCGTAAAGCCTCGGTACACA
ATGTAAACCCCAAATCTCAGTAGACCAGAGTATCAACAACCGTAAATACA
TACCAGGTATCTGGTATATGGTATCGCTTCCACCCCTTCTTGAATGAGAA
ATCTAGCCTTGTCGCTCCAGCATCCCGGTTTCTTAGTAGAGGACCAGTAC
TTATACTGCGTACATGCACTACTAAGAATAAGAAAACGAAGTTGACTTTT
TGGTGAGCACCACGTCAGAAAATTGGACTGAGAAATCGTGCTCTAGGGGC
GAGCGCCGCACTGCATGCTACCTTGATGCCACGGTATACAAAAGGCTATT
CTCAACGAGGATCGCGTCTTGATAGGGTTCTAAGGCTTGCTCACATCCGG
TGCTTTTGTTATGTGTGTTGTATCACTATATTCCTTGACTAGGTTCCTTT
TTGCTTTTTGATAGAGACGCCATCTGTGGGGTCGGGAATTCTGGTCGGAT
CTCATATTTTGCAAGATGCGAGTGTATGTACCCCACCCCCCAACAGACGT
CGGCTAATTAATCCCTCTCATGGTTTATATGTTGTAGGTTTGGGTTGCGA
TGATGTCTACTGTAGGTCTGTTTCAGTTCGGCCCATGGCAATGTTCTGGT
TCAGCCTCCGGCTCAAGTTGTTCTGGTTCAATCTGGCTTGGGTTCGGTTC
GATTCGGTTCGGTTCGAATCGGTCTCTGTTCGGCAGCGCGAACAAAACAA
CGGGAGCTGAAGCATGTTGATGGTGATCGACCTTTCTCGAGATATTTCTC
GAGATCTTACTCAGGGCCTTCTCTATATTTTCTCGAGATTTTTCTCGAGA
TTTTTCTCGAGATCGTTCTCGGGGTTTTTTCTCGGGATATTTCTCGAGAT
CATTCTCGGATTTTTCCCGTAGACAGGTCGGTCAGCGGTTACACACTGTC
TGATGTCGAGAGAAAATCGCCACCTTCCAAAACAGGGGGAGGTGTTGTGT
TGCGTGCTTTACGGTGCTCTTTCACGCACTTCCTAGATATAGTATCCCGT
CTGTGCCAGCTGCTACGTACGTGCGCAACACAGCAGAGGGGCAGCCGATG
GCGCCGGCTACCTTGCCGCTGAGTGGAGTACGCACCGAGCGACCGGTCCA
GACAGGATATATATAAGTGCGTGTAAGAGTACCGTATTACACGCTATATA
ACACCTCCCCCTCTAGGATAAGCATGTCAAGCGCGACGCGGTTGGTTGTC
ACGAGGGTTAAACTGCGTAGTTTTCGCTCCCAGTTTTGGTTAGGGATTTT
CTTTTTTCAACTTTTTTGTGTTTTTTTTTTTTTTCCGCCCACACACACGG
TGGGGATGACACAAACAACGCCTTCATAAACCACAGTACGACATAACCTG
TTTTTGTAGTGTAGTTGCGTCCCCGTTTTTTTTTTGGTTTGACGGACGCC
CGCTTTGGGTGACTTGACGCAAAGGTATACAGATACCTTTGGCTCATATG
CATACTTTTTTTTCTCGATGCCCTTTCAAGTTTGTACTTATTTCATTCTC
CGGACCCAGCTTTTGTGGTACATCCGGCGGTTGTTGGACTGTATTGCAGG
CATTTCGCCGGGTAAAACCTTGCTGACTTTGTGCGTCGACGGCTGCCGTT
ACATGTTGTGCTTCTTTCTTTCCCCTCACGTATCCATGTACTTTTGTTTC
TTTTCTTTTCTCTTGTTGGTCGTTCTGTCTGTCACGTCTGTCGTCCCTTT
TTATTTATTTTTTACCTTTTTCTTTTCTGGACAATCACGCACGCCTGCCT
GGCTCTTTAGGGCGACGCAACGTACTTGGTGGTGACAGAAGACAAGAAGA
TCCAGGACTACGGAATCGTGGCTGTGTGCACTCACCTGGGATGCGTGGTG
CCGTGGAACAAGGCGGAGAACAAGTTTATCTGCCCTTGCCACGGCTCCCA
ATACGACGCCACCGGAAAGGTGATGTGACGGGTCTGTCTTATCGGTGGGC
TTTTTTCCCCGAGGAAGTTCCATACTTTTTTCGAGCAATTGTTTCAAACT
TGACAGATTTTCCTTTTTTTTTTGTTTCCAAATATTTGAGAATTAATTAT
GCTGATATTTTTGCTCTTGTTAAGTATTTCACTAAATTGTAAATTGTGAC
AAAACGCCCCCGTATCTTTGAAACTTGAAAAAAAACTGTAAAAAAAAAAA
AAAAAACTCCGGTAAGAGAGGCCTGATGTACTTTACATACCAGAGTGTGT
ATTTTTGAGTTTTTTTTTTGTTCGGGTATCGTTCCGTAAATATAAGATGA
TGCCGGGAGTCTCTGCTGCAATGGTTGCTTGCCCCTTGAAGTGGCAAATC
GCGCGGCACAGCACCAACAATGCGTAGAGCGCATGCCCACAGGTGCCACA
AGGTTTTTCGCAGCTGATCATATCTGCGCTGACCGCCCTACGTTGAAGGC
AGTTTTGCCCCCCAAAAAAAAAATCTCACGCTCACGCCTCATCTCACAGC
TCACATGCAGCAGCAGTAGCAACGCATTAAAAAATGGTCTTCACTTGACT
CATCCGGTGGCATCCGGTGGCGTCGAATTGGGCAAGATAAATCAGTCCCC
ACTGCATGGATTTAGATACTCTAGGGGAAACATAATCCTGATCTGTATGA
TCTTGCATGGCATGGTCGATGTTGCCGGGTGGCCATCCGTATATCTGCAC
ACTACCTTGAAACGACAGGGTAGGATCTAACATTGATACTGTGGTAAATT
ATGTCCTTTTATCGGTGATATTTCTGATGTGCGAGACGTGGTGAAATTGT
TGTATGTTTTGGGTTGCATCACGACCGACAACACCGACACTAGGCCCCTC
CGTGTGGNNNNNNNNNNCGAACATCCTATCTTCGCTCACCTATGCTACTT
GTTCCGGTAGTGATTCGTGACGTGCCACGGGTGTTGGTGGTGTTTTGTTT
TTGTCCCGCCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCGGTATCTCGTC
TCTTGCGGGCCTCTTGTTGTCGATAATGTTTTTGTCGGCAATACTATGCG
TCGAACGACAATGTGGCTACTTCCGGGTGGTGCCTTGGACTGACATCTGA
CATGACACTGGCATGACGCACTGCTGGACCTGCGCAGGTCGTGAGGGGTC
CCGCACCTCTGTCGCTGGCTCTGTCGCACGTCGAGGAGAACGACGGCAAG
GTGGTCTTCAAGCAGTGGTGAGTTCGCCATACCAGTACGATTGTGTCTAT
CGCTTGGGGCTGCAATCCACGTTCACTTCGTTACGTTTGGGACAGATGAT
GATCTATCTGCCTGTCGTATAAATGATACCAGGTACCTGGTATGGGCTCT
AGTGGGTTCGGAGATCTGATATCTGCTTGTAGAGACAAAGCGTATGGTAC
AGATGATGACGTGGAAAAAACGTGTGCAGACCACGCAGAGCGTACCGGAG
TATATGCTCTGGCACTTCGGGGTGCAACGAATCCGTGCAACGAATCCAAC
TACATACAGTAGTCGTCAATGGTACGGGAGGGGGACACTGCAGAAGAAGC
GAGTGTCAGGCTTGAGATAGATTCTACAGGAAAGTTGAAAGAACGCCGCA
GCTGCGAGCTCCAAGTTCGGGGGGCAGTAAACGTTCCAATGGACATGTTT
TTGTCTTGTTTTTCTGCGGTTTTTGGTGGAATACTTGTATTAGTTGTTTG
TTAATGGTACAAGAACTAGTCGTTGCTGAGGCGGAGGGCTCGGAACAAGT
GTCATTCCGCGGCCGCGTTGACTTTGTCAGGGTATAATGTACTTCGCGAA
CTGTTTCGCATACAAAACTGCCAGGTATGTCCTACTGCTGTAGTTTGAAC
CTGCACGTGATTTTACATTTTCGTCGACAATGCACTATCAACTAAAAAGT
CATATTTATATTGTTGAATGCCTTCTGAGTCCTGCCGATCCCCCCCCCCC
CTCTTTCCAACCAGATTTTTCTCTTGTCGAGCACAAGTCCTCCTCTCTTT
TATTCAAAACCGGCCCCGCTGCTCCACCCCAACCCTTGTTCTTCGGCGTC
CATTTTTTTTTTCCACTTTTTTTTTTTCTCCATTTCTGCTCTTCCAGGTC
GGAGACAGACTTCCGTAACGGCGAGAAGCCGTGGTGGTCGTAGAGCGTTA
TTTTTCTCGTTCGATTCCTCTCCGGCAGAGTGTGCCGTGGATGCGAAGGA
GCGGTGGGCTTCCTTCCTTCCTTGCTCCT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig12581:2587..8865-

>mRNA_M-pyrifera_M_contig12581.5225.1 ID=mRNA_M-pyrifera_M_contig12581.5225.1|Name=mRNA_M-pyrifera_M_contig12581.5225.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1086bp|location=Sequence derived from alignment at M-pyrifera_M_contig12581:2587..8865- (Macrocystis pyrifera P11B4 male)
ATGAAGATGTCGGCAGCAGACGACGCGTTCGTGCCCGACATGGACCGCCG
TACCGCCATGAACCTCATCCTCGCGGGCTCCATCGGCGTCAACGTGCTCG
GCCTGGCCGTCCCGTACATCGCTTTCTTCGTGCCCCCTGGCAGCGGTGGC
AGCGGGGGGGGCGTTATCGCAAAGGACGCCATCGGCAGCGAGGTGACCAC
CGACAGCTGGTTGGCCACGCACGGGGTGGGGTCCAGGGAGCTCGCTGAGG
GCATCAAGATGAAGATGTCGGCAGCAGACGACGCGTTCGTGCCCGACATG
GACCGCCGTACCGCCATGAACCTCATCCTCGCGGGCTCCATCGGCGTCAA
CGTGCTCGGCCTGGCCGTCCCGTACATCGCTTTCTTCGTGCCCCCTGGCA
GCGGTGGCAGCGGGGGGGGCGTTATCGCAAAGGACGCCATCGGCAGCGAG
GTGACCACCGACAGCTGGTTGGCCACGCACGGGGTGGGGTCCAGGGAGCT
CGCTGAGGGCATCAAGGGCGACGCAACGTACTTGGTGGTGACAGAAGACA
AGAAGATCCAGGACTACGGAATCGTGGCTGTGTGCACTCACCTGGGATGC
GTGGTGCCGTGGAACAAGGCGGAGAACAAGTTTATCTGCCCTTGCCACGG
CTCCCAATACGACGCCACCGGAAAGGGCGACGCAACGTACTTGGTGGTGA
CAGAAGACAAGAAGATCCAGGACTACGGAATCGTGGCTGTGTGCACTCAC
CTGGGATGCGTGGTGCCGTGGAACAAGGCGGAGAACAAGTTTATCTGCCC
TTGCCACGGCTCCCAATACGACGCCACCGGAAAGGTCGTGAGGGGTCCCG
CACCTCTGTCGCTGGCTCTGTCGCACGTCGAGGAGAACGACGGCAAGGTG
GTCTTCAAGCAGTGGTCGTGAGGGGTCCCGCACCTCTGTCGCTGGCTCTG
TCGCACGTCGAGGAGAACGACGGCAAGGTGGTCTTCAAGCAGTGGTCGGA
GACAGACTTCCGTAACGGCGAGAAGCCGTGGTGGTCGTAGGTCGGAGACA
GACTTCCGTAACGGCGAGAAGCCGTGGTGGTCGTAG
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