mRNA_M-pyrifera_M_contig125791.5219.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig125791.5219.1
Unique NamemRNA_M-pyrifera_M_contig125791.5219.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig125791.5219.1 vs. uniprot
Match: A0A7S1CMA0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CMA0_9STRA)

HSP 1 Score: 217 bits (552), Expect = 1.280e-67
Identity = 103/133 (77.44%), Postives = 118/133 (88.72%), Query Frame = 1 
Query:    4 TLRDFTLIKVVGKGSFGKVMMVRKKAGGQVYAMKVLSKAHIIKRNQVEHTRTERVVLGQVEHPFIVGLKFAFQTKQKLYFVLDYCAGGELFFHLGRAGRFDEDRARFYAAQITLALEELHRRGVIYRDLKPEN 402
            T+RDF+L+KVVGKGSFGKVM VR K  G++YAMKVL KA+I+KRNQVEHTRTER VLG+++HPFIVGL FAFQTK KLYFVLDYCAGGELFFHLG  GRFDE R+ FYAAQI LAL+ LH++ +IYRDLKPEN
Sbjct:  189 TIRDFSLLKVVGKGSFGKVMQVRSKTNGRIYAMKVLRKANIVKRNQVEHTRTERNVLGRIDHPFIVGLNFAFQTKSKLYFVLDYCAGGELFFHLGNEGRFDEHRSAFYAAQIVLALDHLHQQSIIYRDLKPEN 321
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BLAST of mRNA_M-pyrifera_M_contig125791.5219.1 vs. uniprot
Match: A0A7S4DP17_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DP17_9EUKA)

HSP 1 Score: 203 bits (517), Expect = 4.570e-63
Identity = 101/134 (75.37%), Postives = 115/134 (85.82%), Query Frame = 1 
Query:    1 VTLRDFTLIKVVGKGSFGKVMMVRKKAGGQVYAMKVLSKAHIIKRNQVEHTRTERVVLGQVEHPFIVGLKFAFQTKQKLYFVLDYCAGGELFFHLGRAGRFDEDRARFYAAQITLALEELHRRGVIYRDLKPEN 402
            V L DF L+KV+GKGSFGKVM+VRK    ++YAMKVL KA++IKRNQVEHTRTER VL  ++HPFIV L++AFQTK KLYFVLD+C GGELFFHLGRAGRF E RARFYAAQITLAL+ LH  G+IYRDLKPEN
Sbjct:  101 VGLEDFMLLKVIGKGSFGKVMLVRKHDSKKIYAMKVLHKANVIKRNQVEHTRTERNVLEYIKHPFIVTLRYAFQTKLKLYFVLDFCPGGELFFHLGRAGRFPEARARFYAAQITLALQYLHDLGIIYRDLKPEN 234
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BLAST of mRNA_M-pyrifera_M_contig125791.5219.1 vs. uniprot
Match: M4BZV4_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BZV4_HYAAE)

HSP 1 Score: 206 bits (523), Expect = 1.000e-62
Identity = 101/134 (75.37%), Postives = 114/134 (85.07%), Query Frame = 1 
Query:    1 VTLRDFTLIKVVGKGSFGKVMMVRKKAGGQVYAMKVLSKAHIIKRNQVEHTRTERVVLGQVEHPFIVGLKFAFQTKQKLYFVLDYCAGGELFFHLGRAGRFDEDRARFYAAQITLALEELHRRGVIYRDLKPEN 402
            VTL DF +IKV+GKGSFGKV++VRK+  G +YAMKVL K +IIKRNQVEHTRTER VLG V HPFIVGL +AFQT +KLYFVLDYCAGGELFFHLG+  RF E RARFYAA+ITLA+E +H   VIYRDLKPEN
Sbjct:   32 VTLEDFVMIKVIGKGSFGKVLLVRKRDTGLIYAMKVLRKENIIKRNQVEHTRTERHVLGYVRHPFIVGLNYAFQTSEKLYFVLDYCAGGELFFHLGKVQRFPEHRARFYAAEITLAIEYVHNLDVIYRDLKPEN 165
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BLAST of mRNA_M-pyrifera_M_contig125791.5219.1 vs. uniprot
Match: D8LWA0_BLAHO (Uncharacterized protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8LWA0_BLAHO)

HSP 1 Score: 206 bits (525), Expect = 9.380e-62
Identity = 96/134 (71.64%), Postives = 119/134 (88.81%), Query Frame = 1 
Query:    1 VTLRDFTLIKVVGKGSFGKVMMVRKKAGGQVYAMKVLSKAHIIKRNQVEHTRTERVVLGQVEHPFIVGLKFAFQTKQKLYFVLDYCAGGELFFHLGRAGRFDEDRARFYAAQITLALEELHRRGVIYRDLKPEN 402
            V+L+ F ++KV+GKGSFGKV  VR+K G ++YAMKVL K+ I  +NQVEHT+TER VLG+V+HPFIVGLK+AFQT++KLYFVLDYC GGELF+HLGRA +F EDRARFYAA+ITLALE LH++G++YRDLKPEN
Sbjct:  159 VSLKSFDILKVIGKGSFGKVFQVRRKDGKEIYAMKVLKKSVIKNKNQVEHTKTERSVLGRVDHPFIVGLKYAFQTREKLYFVLDYCPGGELFYHLGRAKKFSEDRARFYAAEITLALEYLHKKGIVYRDLKPEN 292
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BLAST of mRNA_M-pyrifera_M_contig125791.5219.1 vs. uniprot
Match: D0P397_PHYIT (RPS6 protein kinase n=10 Tax=Peronosporaceae TaxID=4777 RepID=D0P397_PHYIT)

HSP 1 Score: 206 bits (523), Expect = 3.430e-61
Identity = 101/134 (75.37%), Postives = 114/134 (85.07%), Query Frame = 1 
Query:    1 VTLRDFTLIKVVGKGSFGKVMMVRKKAGGQVYAMKVLSKAHIIKRNQVEHTRTERVVLGQVEHPFIVGLKFAFQTKQKLYFVLDYCAGGELFFHLGRAGRFDEDRARFYAAQITLALEELHRRGVIYRDLKPEN 402
            VTL DF +IKV+GKGSFGKV++VRK+  G +YAMKVL K +IIKRNQVEHTRTER VLG V HPFIVGL +AFQT +KLYFVLDYCAGGELFFHLG+  RF E RARFYAA+ITLA+E +H   VIYRDLKPEN
Sbjct:  196 VTLEDFVMIKVIGKGSFGKVLLVRKRDTGLIYAMKVLRKENIIKRNQVEHTRTERHVLGYVRHPFIVGLNYAFQTSEKLYFVLDYCAGGELFFHLGKVQRFPEHRARFYAAEITLAIEYVHNLDVIYRDLKPEN 329
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BLAST of mRNA_M-pyrifera_M_contig125791.5219.1 vs. uniprot
Match: H3HDS7_PHYRM (Uncharacterized protein n=9 Tax=Peronosporaceae TaxID=4777 RepID=H3HDS7_PHYRM)

HSP 1 Score: 206 bits (523), Expect = 3.430e-61
Identity = 101/134 (75.37%), Postives = 114/134 (85.07%), Query Frame = 1 
Query:    1 VTLRDFTLIKVVGKGSFGKVMMVRKKAGGQVYAMKVLSKAHIIKRNQVEHTRTERVVLGQVEHPFIVGLKFAFQTKQKLYFVLDYCAGGELFFHLGRAGRFDEDRARFYAAQITLALEELHRRGVIYRDLKPEN 402
            VTL DF +IKV+GKGSFGKV++VRK+  G +YAMKVL K +IIKRNQVEHTRTER VLG V HPFIVGL +AFQT +KLYFVLDYCAGGELFFHLG+  RF E RARFYAA+ITLA+E +H   VIYRDLKPEN
Sbjct:  197 VTLEDFVMIKVIGKGSFGKVLLVRKRDTGLIYAMKVLRKENIIKRNQVEHTRTERHVLGYVRHPFIVGLNYAFQTSEKLYFVLDYCAGGELFFHLGKVQRFPEHRARFYAAEITLAIEYVHNLDVIYRDLKPEN 330
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BLAST of mRNA_M-pyrifera_M_contig125791.5219.1 vs. uniprot
Match: A0A1V9Y6M2_9STRA (RPS6 protein kinase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y6M2_9STRA)

HSP 1 Score: 204 bits (519), Expect = 7.850e-61
Identity = 102/134 (76.12%), Postives = 114/134 (85.07%), Query Frame = 1 
Query:    1 VTLRDFTLIKVVGKGSFGKVMMVRKKAGGQVYAMKVLSKAHIIKRNQVEHTRTERVVLGQVEHPFIVGLKFAFQTKQKLYFVLDYCAGGELFFHLGRAGRFDEDRARFYAAQITLALEELHRRGVIYRDLKPEN 402
            VTL DF LIKV+GKGSFGKV++VRKK  G VYAMKVL K +IIKRNQVEHTRTER VLG V HPFIVGL +AFQT +KLYFVLDYCAGGELFFHLG+  RF E RA+FYAA+ITLA+E +H   +IYRDLKPEN
Sbjct:  184 VTLDDFHLIKVIGKGSFGKVLLVRKKDTGVVYAMKVLRKENIIKRNQVEHTRTERHVLGYVRHPFIVGLNYAFQTAEKLYFVLDYCAGGELFFHLGKVQRFKEPRAQFYAAEITLAIEYVHNLDIIYRDLKPEN 317
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BLAST of mRNA_M-pyrifera_M_contig125791.5219.1 vs. uniprot
Match: A0A485LAT9_9STRA (Aste57867_18105 protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A485LAT9_9STRA)

HSP 1 Score: 199 bits (507), Expect = 1.480e-60
Identity = 97/134 (72.39%), Postives = 112/134 (83.58%), Query Frame = 1 
Query:    1 VTLRDFTLIKVVGKGSFGKVMMVRKKAGGQVYAMKVLSKAHIIKRNQVEHTRTERVVLGQVEHPFIVGLKFAFQTKQKLYFVLDYCAGGELFFHLGRAGRFDEDRARFYAAQITLALEELHRRGVIYRDLKPEN 402
            V+L DF+LI+V+GKGSFGKV +VRKK   +V+AMK+LSKA+I+KRNQVEHTRTER VL  V HPFIV L +AFQTK KLYFVLDYC GGELFFHL R G+F ED ARFY A++ +ALE LH  GVIYRDLKPEN
Sbjct:   30 VSLEDFSLIRVIGKGSFGKVTLVRKKDNSKVFAMKILSKAYIVKRNQVEHTRTERRVLAVVSHPFIVSLHYAFQTKDKLYFVLDYCPGGELFFHLTRLGKFTEDMARFYTAELVVALEHLHSLGVIYRDLKPEN 163
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BLAST of mRNA_M-pyrifera_M_contig125791.5219.1 vs. uniprot
Match: A0A485K3Q6_9STRA (Aste57867_481 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K3Q6_9STRA)

HSP 1 Score: 204 bits (520), Expect = 1.680e-60
Identity = 101/134 (75.37%), Postives = 113/134 (84.33%), Query Frame = 1 
Query:    1 VTLRDFTLIKVVGKGSFGKVMMVRKKAGGQVYAMKVLSKAHIIKRNQVEHTRTERVVLGQVEHPFIVGLKFAFQTKQKLYFVLDYCAGGELFFHLGRAGRFDEDRARFYAAQITLALEELHRRGVIYRDLKPEN 402
            VTL DF L+KV+GKGSFGKV++VRK+  G VYAMKVL K +IIKRNQVEHTRTER VLG V HPFIVGL +AFQT  KLYFVLDYCAGGELFFHLG+  RF E RARFYAA+ITLA+E +H   +IYRDLKPEN
Sbjct:  242 VTLEDFHLVKVIGKGSFGKVLLVRKRDNGLVYAMKVLRKENIIKRNQVEHTRTERHVLGYVRHPFIVGLNYAFQTVDKLYFVLDYCAGGELFFHLGKVQRFKEPRARFYAAEITLAIEYVHNLDIIYRDLKPEN 375
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BLAST of mRNA_M-pyrifera_M_contig125791.5219.1 vs. uniprot
Match: A0A6G0X362_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X362_9STRA)

HSP 1 Score: 204 bits (518), Expect = 2.020e-60
Identity = 101/134 (75.37%), Postives = 113/134 (84.33%), Query Frame = 1 
Query:    1 VTLRDFTLIKVVGKGSFGKVMMVRKKAGGQVYAMKVLSKAHIIKRNQVEHTRTERVVLGQVEHPFIVGLKFAFQTKQKLYFVLDYCAGGELFFHLGRAGRFDEDRARFYAAQITLALEELHRRGVIYRDLKPEN 402
            VTL DF L+KV+GKGSFGKV++VRK+  G VYAMKVL K +IIKRNQVEHTRTER VLG V HPFIVGL +AFQT  KLYFVLDYCAGGELFFHLG+  RF E RARFYAA+ITLA+E +H   +IYRDLKPEN
Sbjct:  200 VTLDDFHLVKVIGKGSFGKVLLVRKRDNGLVYAMKVLRKENIIKRNQVEHTRTERHVLGYVRHPFIVGLNYAFQTVDKLYFVLDYCAGGELFFHLGKVQRFKEPRARFYAAEITLAIEYVHNLDIIYRDLKPEN 333
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125791.5219.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1CMA0_9STRA1.280e-6777.44Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S4DP17_9EUKA4.570e-6375.37Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
M4BZV4_HYAAE1.000e-6275.37Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
D8LWA0_BLAHO9.380e-6271.64Uncharacterized protein n=1 Tax=Blastocystis homin... [more]
D0P397_PHYIT3.430e-6175.37RPS6 protein kinase n=10 Tax=Peronosporaceae TaxID... [more]
H3HDS7_PHYRM3.430e-6175.37Uncharacterized protein n=9 Tax=Peronosporaceae Ta... [more]
A0A1V9Y6M2_9STRA7.850e-6176.12RPS6 protein kinase (Fragment) n=1 Tax=Thraustothe... [more]
A0A485LAT9_9STRA1.480e-6072.39Aste57867_18105 protein n=4 Tax=Aphanomyces TaxID=... [more]
A0A485K3Q6_9STRA1.680e-6075.37Aste57867_481 protein n=1 Tax=Aphanomyces stellatu... [more]
A0A6G0X362_9STRA2.020e-6075.37Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig125791contigM-pyrifera_M_contig125791:110..511 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score206.5
Seed ortholog evalue8e-51
Seed eggNOG ortholog164328.Phyra96430
KEGG koko:K04456,ko:K04688,ko:K08286,ko:K13303
KEGG Pathwayko01521,ko01522,ko01524,ko04010,ko04012,ko04014,ko04015,ko04022,ko04024,ko04062,ko04066,ko04068,ko04071,ko04072,ko04140,ko04150,ko04151,ko04152,ko04210,ko04211,ko04212,ko04213,ko04218,ko04261,ko04350,ko04370,ko04371,ko04380,ko04510,ko04550,ko04611,ko04620,ko04630,ko04660,ko04662,ko04664,ko04666,ko04668,ko04714,ko04722,ko04725,ko04728,ko04910,ko04914,ko04915,ko04917,ko04919,ko04920,ko04922,ko04923,ko04926,ko04931,ko04932,ko04933,ko04973,ko05142,ko05145,ko05152,ko05160,ko05161,ko05162,ko05164,ko05165,ko05166,ko05167,ko05169,ko05200,ko05205,ko05210,ko05211,ko05212,ko05213,ko05214,ko05215,ko05218,ko05220,ko05221,ko05222,ko05223,ko05224,ko05225,ko05226,ko05230,ko05231,ko05418,map01521,map01522,map01524,map04010,map04012,map04014,map04015,map04022,map04024,map04062,map04066,map04068,map04071,map04072,map04140,map04150,map04151,map04152,map04210,map04211,map04212,map04213,map04218,map04261,map04350,map04370,map04371,map04380,map04510,map04550,map04611,map04620,map04630,map04660,map04662,map04664,map04666,map04668,map04714,map04722,map04725,map04728,map04910,map04914,map04915,map04917,map04919,map04920,map04922,map04923,map04926,map04931,map04932,map04933,map04973,map05142,map05145,map05152,map05160,map05161,map05162,map05164,map05165,map05166,map05167,map05169,map05200,map05205,map05210,map05211,map05212,map05213,map05214,map05215,map05218,map05220,map05221,map05222,map05223,map05224,map05225,map05226,map05230,map05231,map05418
KEGG ModuleM00676
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Protein kinase C terminal domain
EggNOG OGs3Q881@4776,COG0515@1,KOG0690@2759
EC2.7.11.1
COG Functional cat.T
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001
Exons1
Model size402
Cds size402
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815773.7210267-CDS-M-pyrifera_M_contig125791:109..5111622815773.7210267-CDS-M-pyrifera_M_contig125791:109..511Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig125791 110..511 +
1692277562.8575053-CDS-M-pyrifera_M_contig125791:109..5111692277562.8575053-CDS-M-pyrifera_M_contig125791:109..511Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig125791 110..511 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig125791.5219.1prot_M-pyrifera_M_contig125791.5219.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig125791 110..511 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig125791.5219.1

>prot_M-pyrifera_M_contig125791.5219.1 ID=prot_M-pyrifera_M_contig125791.5219.1|Name=mRNA_M-pyrifera_M_contig125791.5219.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=134bp
VTLRDFTLIKVVGKGSFGKVMMVRKKAGGQVYAMKVLSKAHIIKRNQVEH
TRTERVVLGQVEHPFIVGLKFAFQTKQKLYFVLDYCAGGELFFHLGRAGR
FDEDRARFYAAQITLALEELHRRGVIYRDLKPEN
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mRNA from alignment at M-pyrifera_M_contig125791:110..511+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig125791.5219.1 ID=mRNA_M-pyrifera_M_contig125791.5219.1|Name=mRNA_M-pyrifera_M_contig125791.5219.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=402bp|location=Sequence derived from alignment at M-pyrifera_M_contig125791:110..511+ (Macrocystis pyrifera P11B4 male)
GTGACATTGCGGGATTTTACTCTGATCAAGGTTGTGGGCAAAGGAAGCTT
TGGAAAGGTGATGATGGTGAGGAAAAAAGCTGGTGGCCAAGTGTATGCGA
TGAAAGTGCTGAGCAAAGCTCACATTATTAAACGCAATCAAGTGGAGCAT
ACAAGGACAGAACGTGTGGTCTTAGGACAAGTAGAGCATCCATTCATTGT
AGGGTTGAAGTTTGCGTTTCAAACGAAACAAAAGCTCTACTTTGTACTGG
ATTATTGTGCTGGTGGGGAATTGTTCTTTCATTTAGGAAGAGCAGGTCGA
TTTGATGAGGACAGGGCTCGTTTCTATGCAGCTCAAATTACGCTTGCATT
GGAAGAGTTGCATCGTCGTGGTGTGATTTACAGAGACCTCAAGCCCGAGA
AT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig125791:110..511+

>mRNA_M-pyrifera_M_contig125791.5219.1 ID=mRNA_M-pyrifera_M_contig125791.5219.1|Name=mRNA_M-pyrifera_M_contig125791.5219.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=804bp|location=Sequence derived from alignment at M-pyrifera_M_contig125791:110..511+ (Macrocystis pyrifera P11B4 male)
GTGACATTGCGGGATTTTACTCTGATCAAGGTTGTGGGCAAAGGAAGCTT
TGGAAAGGTGATGATGGTGAGGAAAAAAGCTGGTGGCCAAGTGTATGCGA
TGAAAGTGCTGAGCAAAGCTCACATTATTAAACGCAATCAAGTGGAGCAT
ACAAGGACAGAACGTGTGGTCTTAGGACAAGTAGAGCATCCATTCATTGT
AGGGTTGAAGTTTGCGTTTCAAACGAAACAAAAGCTCTACTTTGTACTGG
ATTATTGTGCTGGTGGGGAATTGTTCTTTCATTTAGGAAGAGCAGGTCGA
TTTGATGAGGACAGGGCTCGTTTCTATGCAGCTCAAATTACGCTTGCATT
GGAAGAGTTGCATCGTCGTGGTGTGATTTACAGAGACCTCAAGCCCGAGA
ATGTGACATTGCGGGATTTTACTCTGATCAAGGTTGTGGGCAAAGGAAGC
TTTGGAAAGGTGATGATGGTGAGGAAAAAAGCTGGTGGCCAAGTGTATGC
GATGAAAGTGCTGAGCAAAGCTCACATTATTAAACGCAATCAAGTGGAGC
ATACAAGGACAGAACGTGTGGTCTTAGGACAAGTAGAGCATCCATTCATT
GTAGGGTTGAAGTTTGCGTTTCAAACGAAACAAAAGCTCTACTTTGTACT
GGATTATTGTGCTGGTGGGGAATTGTTCTTTCATTTAGGAAGAGCAGGTC
GATTTGATGAGGACAGGGCTCGTTTCTATGCAGCTCAAATTACGCTTGCA
TTGGAAGAGTTGCATCGTCGTGGTGTGATTTACAGAGACCTCAAGCCCGA
GAAT
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